Coexpression cluster: Cluster_85 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006364 rRNA processing 2.34% (3/128) 5.1 8.7e-05 0.003293
GO:0016072 rRNA metabolic process 2.34% (3/128) 5.1 8.7e-05 0.003293
GO:1901265 nucleoside phosphate binding 15.62% (20/128) 1.24 0.000281 0.004004
GO:0000166 nucleotide binding 15.62% (20/128) 1.24 0.000281 0.004004
GO:0044464 cell part 11.72% (15/128) 1.6 0.000134 0.004358
GO:0097367 carbohydrate derivative binding 14.84% (19/128) 1.29 0.000268 0.004369
GO:0005852 eukaryotic translation initiation factor 3 complex 1.56% (2/128) 6.36 0.000232 0.004408
GO:0032553 ribonucleotide binding 14.84% (19/128) 1.3 0.000252 0.004417
GO:0044444 cytoplasmic part 7.03% (9/128) 2.2 0.000158 0.004509
GO:0035639 purine ribonucleoside triphosphate binding 14.84% (19/128) 1.57 2e-05 0.004599
GO:0017076 purine nucleotide binding 15.62% (20/128) 1.37 8.2e-05 0.004658
GO:0034641 cellular nitrogen compound metabolic process 10.94% (14/128) 1.83 4.1e-05 0.004684
GO:0032555 purine ribonucleotide binding 14.84% (19/128) 1.31 0.000227 0.004707
GO:0043226 organelle 7.81% (10/128) 2.0 0.000213 0.004854
GO:0043229 intracellular organelle 7.81% (10/128) 2.0 0.000213 0.004854
GO:0044424 intracellular part 11.72% (15/128) 1.68 6.8e-05 0.005206
GO:0036094 small molecule binding 15.62% (20/128) 1.16 0.000562 0.007543
GO:0001882 nucleoside binding 3.91% (5/128) 2.61 0.001435 0.010554
GO:0005524 ATP binding 10.94% (14/128) 1.33 0.001405 0.010678
GO:0001883 purine nucleoside binding 3.91% (5/128) 2.61 0.001398 0.010991
GO:0005525 GTP binding 3.91% (5/128) 2.61 0.001398 0.010991
GO:0032549 ribonucleoside binding 3.91% (5/128) 2.61 0.001398 0.010991
GO:0032550 purine ribonucleoside binding 3.91% (5/128) 2.61 0.001398 0.010991
GO:0032561 guanyl ribonucleotide binding 3.91% (5/128) 2.61 0.001398 0.010991
GO:0019001 guanyl nucleotide binding 3.91% (5/128) 2.57 0.001591 0.011334
GO:1990904 ribonucleoprotein complex 4.69% (6/128) 2.42 0.000928 0.011753
GO:0044085 cellular component biogenesis 1.56% (2/128) 4.98 0.001764 0.012187
GO:0043168 anion binding 14.84% (19/128) 1.1 0.001302 0.012365
GO:0006139 nucleobase-containing compound metabolic process 7.03% (9/128) 1.78 0.001286 0.012746
GO:0042254 ribosome biogenesis 1.56% (2/128) 5.23 0.001252 0.012972
GO:0003697 single-stranded DNA binding 1.56% (2/128) 5.23 0.001252 0.012972
GO:0022613 ribonucleoprotein complex biogenesis 1.56% (2/128) 5.23 0.001252 0.012972
GO:0090304 nucleic acid metabolic process 6.25% (8/128) 1.95 0.001157 0.013885
GO:0003676 nucleic acid binding 10.94% (14/128) 1.27 0.002071 0.013885
GO:0006259 DNA metabolic process 3.12% (4/128) 2.8 0.002662 0.014801
GO:0006725 cellular aromatic compound metabolic process 7.03% (9/128) 1.63 0.002661 0.015168
GO:0008144 drug binding 10.94% (14/128) 1.23 0.002652 0.015507
GO:0046483 heterocycle metabolic process 7.03% (9/128) 1.63 0.002632 0.015789
GO:0034470 ncRNA processing 2.34% (3/128) 3.46 0.002573 0.015856
GO:1901363 heterocyclic compound binding 21.88% (28/128) 0.79 0.002521 0.015969
GO:0097159 organic cyclic compound binding 21.88% (28/128) 0.79 0.002521 0.015969
GO:1901360 organic cyclic compound metabolic process 7.03% (9/128) 1.58 0.003271 0.016571
GO:0005737 cytoplasm 2.34% (3/128) 3.36 0.003132 0.016608
GO:0032991 protein-containing complex 7.03% (9/128) 1.59 0.003236 0.016769
GO:0006412 translation 3.91% (5/128) 2.32 0.003387 0.016788
GO:0005488 binding 32.81% (42/128) 0.58 0.003121 0.016945
GO:0030554 adenyl nucleotide binding 11.72% (15/128) 1.13 0.003664 0.017405
GO:0043043 peptide biosynthetic process 3.91% (5/128) 2.3 0.003602 0.017473
GO:0006518 peptide metabolic process 3.91% (5/128) 2.26 0.004061 0.018517
GO:0043604 amide biosynthetic process 3.91% (5/128) 2.26 0.004061 0.018517
GO:0009059 macromolecule biosynthetic process 5.47% (7/128) 1.79 0.004348 0.019439
GO:0043603 cellular amide metabolic process 3.91% (5/128) 2.19 0.004916 0.019666
GO:0000313 organellar ribosome 0.78% (1/128) 7.69 0.004858 0.019781
GO:0044452 nucleolar part 0.78% (1/128) 7.69 0.004858 0.019781
GO:0005732 small nucleolar ribonucleoprotein complex 0.78% (1/128) 7.69 0.004858 0.019781
GO:0005761 mitochondrial ribosome 0.78% (1/128) 7.69 0.004858 0.019781
GO:0034457 Mpp10 complex 0.78% (1/128) 7.69 0.004858 0.019781
GO:0003743 translation initiation factor activity 1.56% (2/128) 4.23 0.005077 0.019956
GO:0043228 non-membrane-bounded organelle 3.91% (5/128) 2.16 0.005487 0.020509
GO:0043232 intracellular non-membrane-bounded organelle 3.91% (5/128) 2.16 0.005487 0.020509
GO:0044271 cellular nitrogen compound biosynthetic process 5.47% (7/128) 1.73 0.005455 0.021079
GO:0018208 peptidyl-proline modification 1.56% (2/128) 3.98 0.007052 0.025523
GO:0000413 protein peptidyl-prolyl isomerization 1.56% (2/128) 3.98 0.007052 0.025523
GO:0016859 cis-trans isomerase activity 1.56% (2/128) 3.93 0.007593 0.026632
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 1.56% (2/128) 3.93 0.007593 0.026632
GO:0019856 pyrimidine nucleobase biosynthetic process 0.78% (1/128) 6.69 0.009693 0.02908
GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process 0.78% (1/128) 6.69 0.009693 0.02908
GO:0006269 DNA replication, synthesis of RNA primer 0.78% (1/128) 6.69 0.009693 0.02908
GO:0003896 DNA primase activity 0.78% (1/128) 6.69 0.009693 0.02908
GO:0006206 pyrimidine nucleobase metabolic process 0.78% (1/128) 6.69 0.009693 0.02908
GO:0004590 orotidine-5'-phosphate decarboxylase activity 0.78% (1/128) 6.69 0.009693 0.02908
GO:0004797 thymidine kinase activity 0.78% (1/128) 6.69 0.009693 0.02908
GO:0019206 nucleoside kinase activity 0.78% (1/128) 6.69 0.009693 0.02908
GO:0019136 deoxynucleoside kinase activity 0.78% (1/128) 6.69 0.009693 0.02908
GO:0032559 adenyl ribonucleotide binding 10.94% (14/128) 1.03 0.008776 0.030316
GO:0006457 protein folding 1.56% (2/128) 3.69 0.010561 0.031271
GO:0034645 cellular macromolecule biosynthetic process 4.69% (6/128) 1.7 0.010915 0.031905
GO:0044422 organelle part 3.91% (5/128) 1.9 0.011337 0.03231
GO:0044446 intracellular organelle part 3.91% (5/128) 1.9 0.011337 0.03231
GO:1901566 organonitrogen compound biosynthetic process 4.69% (6/128) 1.74 0.009544 0.032477
GO:0008135 translation factor activity, RNA binding 1.56% (2/128) 3.6 0.01187 0.033411
GO:0043227 membrane-bounded organelle 3.91% (5/128) 1.86 0.0127 0.034886
GO:0043231 intracellular membrane-bounded organelle 3.91% (5/128) 1.86 0.0127 0.034886
GO:0043170 macromolecule metabolic process 14.06% (18/128) 0.8 0.014513 0.036362
GO:0032977 membrane insertase activity 0.78% (1/128) 6.1 0.014505 0.036746
GO:0000774 adenyl-nucleotide exchange factor activity 0.78% (1/128) 6.1 0.014505 0.036746
GO:0030145 manganese ion binding 0.78% (1/128) 6.1 0.014505 0.036746
GO:0009112 nucleobase metabolic process 0.78% (1/128) 6.1 0.014505 0.036746
GO:0016255 attachment of GPI anchor to protein 0.78% (1/128) 6.1 0.014505 0.036746
GO:0046112 nucleobase biosynthetic process 0.78% (1/128) 6.1 0.014505 0.036746
GO:0042803 protein homodimerization activity 0.78% (1/128) 6.1 0.014505 0.036746
GO:0006807 nitrogen compound metabolic process 14.84% (19/128) 0.77 0.015102 0.037428
GO:0044429 mitochondrial part 1.56% (2/128) 3.36 0.016194 0.039702
GO:0018193 peptidyl-amino acid modification 1.56% (2/128) 3.33 0.016971 0.041164
GO:0005840 ribosome 3.12% (4/128) 2.01 0.017976 0.042253
GO:0005515 protein binding 10.94% (14/128) 0.89 0.019366 0.042457
GO:0016070 RNA metabolic process 3.91% (5/128) 1.73 0.017886 0.042479
GO:0019205 nucleobase-containing compound kinase activity 0.78% (1/128) 5.69 0.019294 0.042708
GO:0005759 mitochondrial matrix 0.78% (1/128) 5.69 0.019294 0.042708
GO:0042765 GPI-anchor transamidase complex 0.78% (1/128) 5.69 0.019294 0.042708
GO:0042802 identical protein binding 0.78% (1/128) 5.69 0.019294 0.042708
GO:0006396 RNA processing 2.34% (3/128) 2.45 0.017801 0.042723
GO:0044237 cellular metabolic process 14.84% (19/128) 0.73 0.019695 0.042767
GO:0034660 ncRNA metabolic process 2.34% (3/128) 2.42 0.018642 0.042933
GO:0003735 structural constituent of ribosome 3.12% (4/128) 1.99 0.018557 0.043173
GO:0044249 cellular biosynthetic process 6.25% (8/128) 1.23 0.021795 0.046011
GO:0044260 cellular macromolecule metabolic process 10.94% (14/128) 0.86 0.021764 0.046376
GO:0005198 structural molecule activity 3.12% (4/128) 1.92 0.021634 0.046534
GO:0031974 membrane-enclosed lumen 0.78% (1/128) 5.36 0.024059 0.048544
GO:0032040 small-subunit processome 0.78% (1/128) 5.36 0.024059 0.048544
GO:0005730 nucleolus 0.78% (1/128) 5.36 0.024059 0.048544
GO:0043233 organelle lumen 0.78% (1/128) 5.36 0.024059 0.048544
GO:0070013 intracellular organelle lumen 0.78% (1/128) 5.36 0.024059 0.048544
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_14 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_21 0.034 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_39 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_51 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_61 0.095 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_77 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_85 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_92 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_97 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_117 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.05 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_157 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_163 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_173 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_176 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.051 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_187 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_204 0.037 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_225 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_236 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_237 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_238 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_260 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_31 0.021 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.078 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_148 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_198 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_6 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_10 0.119 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_35 0.025 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_38 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_64 0.027 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_69 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_75 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_121 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_124 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_137 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_7 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_8 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_34 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_52 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.105 Gene family Compare
Oryza sativa HCCA cluster Cluster_81 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_182 0.027 Gene family Compare
Oryza sativa HCCA cluster Cluster_183 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_199 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_228 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_256 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_263 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_274 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_276 0.025 Gene family Compare
Oryza sativa HCCA cluster Cluster_283 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_284 0.039 Gene family Compare
Oryza sativa HCCA cluster Cluster_335 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_27 0.024 Gene family Compare
Picea abies HCCA cluster Cluster_64 0.032 Gene family Compare
Picea abies HCCA cluster Cluster_68 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_73 0.029 Gene family Compare
Picea abies HCCA cluster Cluster_222 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_248 0.025 Gene family Compare
Picea abies HCCA cluster Cluster_258 0.048 Gene family Compare
Picea abies HCCA cluster Cluster_275 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_318 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_339 0.034 Gene family Compare
Picea abies HCCA cluster Cluster_399 0.022 Gene family Compare
Picea abies HCCA cluster Cluster_407 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_432 0.036 Gene family Compare
Picea abies HCCA cluster Cluster_453 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_9 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_10 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_21 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_36 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_55 0.033 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_64 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_66 0.045 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_103 0.021 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_104 0.023 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_109 0.024 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_110 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_113 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_138 0.025 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_158 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_165 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_197 0.027 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_14 0.072 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_47 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_64 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_99 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_121 0.03 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_122 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_152 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.06 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_166 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_183 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_211 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_254 0.038 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_272 0.051 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_285 0.022 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_303 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_104 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_199 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_231 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_37 0.028 Gene family Compare
Zea mays HCCA cluster Cluster_43 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_54 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_70 0.03 Gene family Compare
Zea mays HCCA cluster Cluster_120 0.027 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.025 Gene family Compare
Zea mays HCCA cluster Cluster_172 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_173 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_186 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_209 0.027 Gene family Compare
Zea mays HCCA cluster Cluster_221 0.059 Gene family Compare
Zea mays HCCA cluster Cluster_259 0.042 Gene family Compare
Zea mays HCCA cluster Cluster_262 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_307 0.062 Gene family Compare
Zea mays HCCA cluster Cluster_326 0.025 Gene family Compare
Zea mays HCCA cluster Cluster_331 0.056 Gene family Compare
Zea mays HCCA cluster Cluster_333 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_341 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_345 0.031 Gene family Compare
Zea mays HCCA cluster Cluster_354 0.016 Gene family Compare
Sequences (128) (download table)

InterPro Domains

GO Terms

Family Terms