Coexpression cluster: Cluster_120 (HCCA cluster)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034641 cellular nitrogen compound metabolic process 11.98% (23/192) 1.96 0.0 4e-06
GO:0044271 cellular nitrogen compound biosynthetic process 8.85% (17/192) 2.42 0.0 4e-06
GO:1901566 organonitrogen compound biosynthetic process 8.33% (16/192) 2.57 0.0 6e-06
GO:0009521 photosystem 3.12% (6/192) 4.4 0.0 2e-05
GO:0009523 photosystem II 2.6% (5/192) 5.03 0.0 2.3e-05
GO:0044249 cellular biosynthetic process 10.42% (20/192) 1.96 0.0 2.3e-05
GO:0015979 photosynthesis 3.12% (6/192) 4.44 0.0 2.4e-05
GO:1901576 organic substance biosynthetic process 10.42% (20/192) 1.88 1e-06 2.9e-05
GO:0044436 thylakoid part 3.12% (6/192) 4.16 1e-06 4.3e-05
GO:0009058 biosynthetic process 10.94% (21/192) 1.75 1e-06 5.1e-05
GO:0033014 tetrapyrrole biosynthetic process 2.08% (4/192) 5.29 3e-06 8.2e-05
GO:0019898 extrinsic component of membrane 2.08% (4/192) 5.29 3e-06 8.2e-05
GO:0005840 ribosome 5.21% (10/192) 2.74 3e-06 8.2e-05
GO:0009654 photosystem II oxygen evolving complex 2.08% (4/192) 5.01 6e-06 0.000164
GO:0043232 intracellular non-membrane-bounded organelle 5.21% (10/192) 2.57 8e-06 0.000181
GO:0043228 non-membrane-bounded organelle 5.21% (10/192) 2.57 8e-06 0.000181
GO:0044444 cytoplasmic part 6.77% (13/192) 2.15 9e-06 0.000184
GO:0033013 tetrapyrrole metabolic process 2.08% (4/192) 4.85 1e-05 0.000194
GO:1990904 ribonucleoprotein complex 5.21% (10/192) 2.58 8e-06 0.000198
GO:0032991 protein-containing complex 8.33% (16/192) 1.83 1.3e-05 0.000222
GO:1990204 oxidoreductase complex 2.08% (4/192) 4.78 1.2e-05 0.000229
GO:0009059 macromolecule biosynthetic process 6.77% (13/192) 2.1 1.3e-05 0.000232
GO:0044237 cellular metabolic process 18.75% (36/192) 1.07 1.7e-05 0.000272
GO:0003735 structural constituent of ribosome 4.69% (9/192) 2.58 2.2e-05 0.00034
GO:0006412 translation 4.69% (9/192) 2.58 2.2e-05 0.000341
GO:0043043 peptide biosynthetic process 4.69% (9/192) 2.56 2.4e-05 0.000353
GO:0043604 amide biosynthetic process 4.69% (9/192) 2.52 3e-05 0.000409
GO:0006518 peptide metabolic process 4.69% (9/192) 2.52 3e-05 0.000409
GO:0005198 structural molecule activity 4.69% (9/192) 2.51 3.3e-05 0.000425
GO:0006520 cellular amino acid metabolic process 3.65% (7/192) 2.95 3.6e-05 0.000454
GO:0043603 cellular amide metabolic process 4.69% (9/192) 2.46 4.3e-05 0.000527
GO:0016853 isomerase activity 3.12% (6/192) 3.04 9.4e-05 0.001108
GO:0043226 organelle 6.77% (13/192) 1.8 0.00011 0.001221
GO:0043229 intracellular organelle 6.77% (13/192) 1.8 0.00011 0.001221
GO:0006725 cellular aromatic compound metabolic process 7.29% (14/192) 1.68 0.000136 0.001437
GO:0046483 heterocycle metabolic process 7.29% (14/192) 1.68 0.000134 0.001452
GO:1901360 organic cyclic compound metabolic process 7.29% (14/192) 1.64 0.000188 0.001878
GO:0008152 metabolic process 27.08% (52/192) 0.7 0.000185 0.001899
GO:0044424 intracellular part 9.38% (18/192) 1.36 0.000249 0.002417
GO:0019438 aromatic compound biosynthetic process 4.17% (8/192) 2.29 0.000257 0.002438
GO:0006807 nitrogen compound metabolic process 16.67% (32/192) 0.94 0.000276 0.002494
GO:1901564 organonitrogen compound metabolic process 14.58% (28/192) 1.02 0.00027 0.002496
GO:0018130 heterocycle biosynthetic process 4.17% (8/192) 2.25 0.000307 0.002707
GO:0009987 cellular process 19.79% (38/192) 0.83 0.000315 0.002714
GO:0019752 carboxylic acid metabolic process 4.17% (8/192) 2.22 0.000344 0.002901
GO:0043436 oxoacid metabolic process 4.17% (8/192) 2.22 0.000354 0.00292
GO:0006082 organic acid metabolic process 4.17% (8/192) 2.21 0.000365 0.002939
GO:0006418 tRNA aminoacylation for protein translation 2.08% (4/192) 3.55 0.000382 0.003013
GO:0098796 membrane protein complex 3.12% (6/192) 2.61 0.000478 0.003696
GO:0034645 cellular macromolecule biosynthetic process 5.21% (10/192) 1.85 0.000513 0.003813
GO:0044464 cell part 9.38% (18/192) 1.27 0.00051 0.003869
GO:1901362 organic cyclic compound biosynthetic process 4.17% (8/192) 2.11 0.000591 0.004308
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 1.56% (3/192) 3.93 0.00098 0.006087
GO:0016859 cis-trans isomerase activity 1.56% (3/192) 3.93 0.00098 0.006087
GO:0018208 peptidyl-proline modification 1.56% (3/192) 3.98 0.000876 0.006145
GO:0000413 protein peptidyl-prolyl isomerization 1.56% (3/192) 3.98 0.000876 0.006145
GO:0043038 amino acid activation 2.08% (4/192) 3.22 0.00091 0.006157
GO:0043039 tRNA aminoacylation 2.08% (4/192) 3.22 0.00091 0.006157
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.08% (4/192) 3.19 0.000969 0.006226
GO:0004812 aminoacyl-tRNA ligase activity 2.08% (4/192) 3.19 0.000969 0.006226
GO:0016874 ligase activity 2.6% (5/192) 2.74 0.000959 0.006376
GO:0006779 porphyrin-containing compound biosynthetic process 1.04% (2/192) 5.29 0.001083 0.006621
GO:0006352 DNA-templated transcription, initiation 1.56% (3/192) 3.83 0.001211 0.007284
GO:0003676 nucleic acid binding 9.9% (19/192) 1.12 0.001247 0.007382
GO:0071704 organic substance metabolic process 19.27% (37/192) 0.72 0.001459 0.008505
GO:0034660 ncRNA metabolic process 2.6% (5/192) 2.58 0.001567 0.009
GO:0016070 RNA metabolic process 4.17% (8/192) 1.82 0.002053 0.011615
GO:0009507 chloroplast 1.04% (2/192) 4.78 0.002288 0.012566
GO:0009536 plastid 1.04% (2/192) 4.78 0.002288 0.012566
GO:0006778 porphyrin-containing compound metabolic process 1.04% (2/192) 4.52 0.003323 0.017494
GO:1901605 alpha-amino acid metabolic process 1.56% (3/192) 3.33 0.003313 0.017687
GO:0018193 peptidyl-amino acid modification 1.56% (3/192) 3.33 0.003313 0.017687
GO:0140101 catalytic activity, acting on a tRNA 2.08% (4/192) 2.66 0.0038 0.019727
GO:0005622 intracellular 2.6% (5/192) 2.25 0.004149 0.020421
GO:0051540 metal cluster binding 1.56% (3/192) 3.23 0.004051 0.020472
GO:0051536 iron-sulfur cluster binding 1.56% (3/192) 3.23 0.004051 0.020472
GO:0044281 small molecule metabolic process 4.17% (8/192) 1.66 0.004147 0.02068
GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses 1.04% (2/192) 4.29 0.004539 0.022053
GO:1902494 catalytic complex 2.08% (4/192) 2.58 0.004638 0.022248
GO:0006399 tRNA metabolic process 2.08% (4/192) 2.52 0.005391 0.025541
GO:0016860 intramolecular oxidoreductase activity 1.04% (2/192) 4.01 0.006686 0.031286
GO:0004640 phosphoribosylanthranilate isomerase activity 0.52% (1/192) 7.1 0.007288 0.031747
GO:0046406 magnesium protoporphyrin IX methyltransferase activity 0.52% (1/192) 7.1 0.007288 0.031747
GO:0046422 violaxanthin de-epoxidase activity 0.52% (1/192) 7.1 0.007288 0.031747
GO:0004655 porphobilinogen synthase activity 0.52% (1/192) 7.1 0.007288 0.031747
GO:0015995 chlorophyll biosynthetic process 0.52% (1/192) 7.1 0.007288 0.031747
GO:0004418 hydroxymethylbilane synthase activity 0.52% (1/192) 7.1 0.007288 0.031747
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_30 0.087 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_71 0.044 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_140 0.111 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_164 0.133 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_192 0.079 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_194 0.028 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_214 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_238 0.034 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_265 0.115 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_71 0.035 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_85 0.039 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_149 0.021 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_4 0.028 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_8 0.057 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_9 0.092 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_16 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_71 0.022 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_84 0.054 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_86 0.03 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_93 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_96 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_7 0.083 Gene family Compare
Oryza sativa HCCA cluster Cluster_21 0.075 Gene family Compare
Oryza sativa HCCA cluster Cluster_126 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_147 0.022 Gene family Compare
Oryza sativa HCCA cluster Cluster_153 0.037 Gene family Compare
Oryza sativa HCCA cluster Cluster_170 0.119 Gene family Compare
Oryza sativa HCCA cluster Cluster_223 0.078 Gene family Compare
Oryza sativa HCCA cluster Cluster_226 0.067 Gene family Compare
Oryza sativa HCCA cluster Cluster_239 0.022 Gene family Compare
Oryza sativa HCCA cluster Cluster_288 0.027 Gene family Compare
Oryza sativa HCCA cluster Cluster_299 0.022 Gene family Compare
Oryza sativa HCCA cluster Cluster_302 0.022 Gene family Compare
Picea abies HCCA cluster Cluster_65 0.05 Gene family Compare
Picea abies HCCA cluster Cluster_186 0.084 Gene family Compare
Picea abies HCCA cluster Cluster_202 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_205 0.051 Gene family Compare
Picea abies HCCA cluster Cluster_275 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_286 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_367 0.03 Gene family Compare
Picea abies HCCA cluster Cluster_373 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_401 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_427 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_476 0.045 Gene family Compare
Picea abies HCCA cluster Cluster_478 0.029 Gene family Compare
Picea abies HCCA cluster Cluster_492 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_11 0.084 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_43 0.053 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_79 0.02 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_82 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_94 0.03 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_167 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_176 0.025 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_192 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_203 0.049 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_15 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_17 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_85 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_92 0.125 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_141 0.031 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_145 0.031 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_149 0.072 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_184 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_206 0.03 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_214 0.126 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_234 0.088 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_245 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_291 0.03 Gene family Compare
Vitis vinifera HCCA cluster Cluster_2 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_45 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_53 0.037 Gene family Compare
Zea mays HCCA cluster Cluster_69 0.119 Gene family Compare
Zea mays HCCA cluster Cluster_75 0.049 Gene family Compare
Zea mays HCCA cluster Cluster_111 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_143 0.028 Gene family Compare
Zea mays HCCA cluster Cluster_163 0.095 Gene family Compare
Zea mays HCCA cluster Cluster_209 0.025 Gene family Compare
Zea mays HCCA cluster Cluster_233 0.025 Gene family Compare
Zea mays HCCA cluster Cluster_246 0.075 Gene family Compare
Zea mays HCCA cluster Cluster_258 0.074 Gene family Compare
Zea mays HCCA cluster Cluster_297 0.041 Gene family Compare
Zea mays HCCA cluster Cluster_313 0.023 Gene family Compare
Sequences (192) (download table)

InterPro Domains

GO Terms

Family Terms