Coexpression cluster: Cluster_91 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 50.0% (36/72) 1.32 0.0 2e-06
GO:0005488 binding 36.11% (26/72) 1.66 0.0 4e-06
GO:0010556 regulation of macromolecule biosynthetic process 8.33% (6/72) 3.14 6.5e-05 0.000845
GO:0009889 regulation of biosynthetic process 8.33% (6/72) 3.14 6.5e-05 0.000845
GO:0031326 regulation of cellular biosynthetic process 8.33% (6/72) 3.14 6.5e-05 0.000845
GO:0051171 regulation of nitrogen compound metabolic process 8.33% (6/72) 3.04 9.2e-05 0.0009
GO:0031323 regulation of cellular metabolic process 8.33% (6/72) 3.04 9.2e-05 0.0009
GO:0080090 regulation of primary metabolic process 8.33% (6/72) 3.04 9.2e-05 0.0009
GO:0065007 biological regulation 9.72% (7/72) 2.71 9.8e-05 0.000909
GO:0019222 regulation of metabolic process 8.33% (6/72) 3.0 0.00011 0.000929
GO:0010468 regulation of gene expression 8.33% (6/72) 3.09 7.8e-05 0.000952
GO:0060255 regulation of macromolecule metabolic process 8.33% (6/72) 3.0 0.000109 0.000962
GO:0050789 regulation of biological process 9.72% (7/72) 2.74 8.5e-05 0.00098
GO:0097159 organic cyclic compound binding 20.83% (15/72) 1.66 6.2e-05 0.001005
GO:1901363 heterocyclic compound binding 20.83% (15/72) 1.66 6.2e-05 0.001005
GO:0140110 transcription regulator activity 6.94% (5/72) 3.63 5.6e-05 0.001093
GO:0019219 regulation of nucleobase-containing compound metabolic process 8.33% (6/72) 3.2 5.1e-05 0.001112
GO:0051252 regulation of RNA metabolic process 8.33% (6/72) 3.22 4.8e-05 0.001166
GO:0008150 biological_process 29.17% (21/72) 1.41 1.9e-05 0.001251
GO:2001141 regulation of RNA biosynthetic process 8.33% (6/72) 3.22 4.7e-05 0.001302
GO:0006355 regulation of DNA-templated transcription 8.33% (6/72) 3.22 4.7e-05 0.001302
GO:1903506 regulation of nucleic acid-templated transcription 8.33% (6/72) 3.22 4.7e-05 0.001302
GO:0006534 cysteine metabolic process 2.78% (2/72) 6.71 0.000166 0.001351
GO:0009069 serine family amino acid metabolic process 2.78% (2/72) 6.51 0.000219 0.001707
GO:0003700 DNA-binding transcription factor activity 6.94% (5/72) 3.74 3.9e-05 0.001895
GO:0000096 sulfur amino acid metabolic process 2.78% (2/72) 6.19 0.000345 0.00259
GO:0050794 regulation of cellular process 8.33% (6/72) 2.57 0.000524 0.003787
GO:0003676 nucleic acid binding 11.11% (8/72) 1.98 0.000939 0.006541
GO:0003723 RNA binding 6.94% (5/72) 2.62 0.001375 0.009244
GO:0043167 ion binding 15.28% (11/72) 1.52 0.001434 0.009318
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen 2.78% (2/72) 4.96 0.001919 0.011691
GO:0051213 dioxygenase activity 2.78% (2/72) 4.96 0.001919 0.011691
GO:1901605 alpha-amino acid metabolic process 2.78% (2/72) 4.79 0.002433 0.014375
GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen 2.78% (2/72) 4.76 0.002524 0.014477
GO:0050896 response to stimulus 4.17% (3/72) 3.44 0.002737 0.01525
GO:0006790 sulfur compound metabolic process 2.78% (2/72) 4.54 0.003418 0.018512
GO:0006979 response to oxidative stress 2.78% (2/72) 4.51 0.003525 0.018576
GO:0043169 cation binding 8.33% (6/72) 1.99 0.004114 0.020057
GO:0009415 response to water 1.39% (1/72) 7.93 0.0041 0.020501
GO:0046872 metal ion binding 8.33% (6/72) 1.99 0.004008 0.020565
GO:0001101 response to acid chemical 1.39% (1/72) 7.51 0.005463 0.025983
GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water 1.39% (1/72) 7.19 0.006824 0.026093
GO:0004014 adenosylmethionine decarboxylase activity 1.39% (1/72) 7.19 0.006824 0.026093
GO:0045927 positive regulation of growth 1.39% (1/72) 7.19 0.006824 0.026093
GO:0006597 spermine biosynthetic process 1.39% (1/72) 7.19 0.006824 0.026093
GO:0008215 spermine metabolic process 1.39% (1/72) 7.19 0.006824 0.026093
GO:0008216 spermidine metabolic process 1.39% (1/72) 7.19 0.006824 0.026093
GO:0008295 spermidine biosynthetic process 1.39% (1/72) 7.19 0.006824 0.026093
GO:0009628 response to abiotic stimulus 1.39% (1/72) 6.71 0.009541 0.027769
GO:0006535 cysteine biosynthetic process from serine 1.39% (1/72) 6.71 0.009541 0.027769
GO:0019346 transsulfuration 1.39% (1/72) 6.71 0.009541 0.027769
GO:0009001 serine O-acetyltransferase activity 1.39% (1/72) 6.71 0.009541 0.027769
GO:0042401 biogenic amine biosynthetic process 1.39% (1/72) 6.71 0.009541 0.027769
GO:0006563 L-serine metabolic process 1.39% (1/72) 6.71 0.009541 0.027769
GO:0016412 serine O-acyltransferase activity 1.39% (1/72) 6.71 0.009541 0.027769
GO:0016413 O-acetyltransferase activity 1.39% (1/72) 6.71 0.009541 0.027769
GO:0019344 cysteine biosynthetic process 1.39% (1/72) 6.71 0.009541 0.027769
GO:0050667 homocysteine metabolic process 1.39% (1/72) 6.71 0.009541 0.027769
GO:0009070 serine family amino acid biosynthetic process 1.39% (1/72) 6.71 0.009541 0.027769
GO:0009092 homoserine metabolic process 1.39% (1/72) 6.71 0.009541 0.027769
GO:0009309 amine biosynthetic process 1.39% (1/72) 6.71 0.009541 0.027769
GO:0004601 peroxidase activity 2.78% (2/72) 4.05 0.006553 0.029041
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor 2.78% (2/72) 4.05 0.006553 0.029041
GO:0016209 antioxidant activity 2.78% (2/72) 3.72 0.010241 0.029369
GO:0006415 translational termination 1.39% (1/72) 6.51 0.010897 0.029513
GO:0032984 protein-containing complex disassembly 1.39% (1/72) 6.51 0.010897 0.029513
GO:1901700 response to oxygen-containing compound 1.39% (1/72) 6.51 0.010897 0.029513
GO:0022411 cellular component disassembly 1.39% (1/72) 6.51 0.010897 0.029513
GO:0040008 regulation of growth 1.39% (1/72) 6.93 0.008184 0.029552
GO:0006595 polyamine metabolic process 1.39% (1/72) 6.93 0.008184 0.029552
GO:0006596 polyamine biosynthetic process 1.39% (1/72) 6.93 0.008184 0.029552
GO:0016491 oxidoreductase activity 6.94% (5/72) 1.9 0.011081 0.029601
GO:0051082 unfolded protein binding 2.78% (2/72) 4.07 0.00641 0.029758
GO:0010035 response to inorganic substance 1.39% (1/72) 6.34 0.012251 0.032282
GO:0006520 amino acid metabolic process 2.78% (2/72) 3.55 0.012842 0.03339
GO:0061630 ubiquitin protein ligase activity 1.39% (1/72) 6.19 0.013603 0.034449
GO:0006576 biogenic amine metabolic process 1.39% (1/72) 6.19 0.013603 0.034449
GO:0061659 ubiquitin-like protein ligase activity 1.39% (1/72) 6.05 0.014953 0.036909
GO:0000097 sulfur amino acid biosynthetic process 1.39% (1/72) 6.05 0.014953 0.036909
GO:0016407 acetyltransferase activity 1.39% (1/72) 5.71 0.018993 0.046295
GO:0046983 protein dimerization activity 2.78% (2/72) 3.2 0.020204 0.04864
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_100 0.042 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_104 0.027 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_265 0.026 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_314 0.083 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_102 0.05 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_172 0.083 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_23 0.028 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_32 0.019 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_106 0.023 OrthoFinder output from all 47 species Compare
Sequences (72) (download table)

InterPro Domains

GO Terms

Family Terms