Coexpression cluster: Cluster_492 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005789 endoplasmic reticulum membrane 3.77% (2/53) 7.39 6.5e-05 0.009971
GO:0005575 cellular_component 18.87% (10/53) 2.0 0.000164 0.0126
GO:0004150 dihydroneopterin aldolase activity 1.89% (1/53) 10.3 0.000795 0.015312
GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds 1.89% (1/53) 10.3 0.000795 0.015312
GO:0047750 cholestenol delta-isomerase activity 1.89% (1/53) 10.3 0.000795 0.015312
GO:0110165 cellular anatomical entity 15.09% (8/53) 1.94 0.001033 0.017683
GO:0031090 organelle membrane 3.77% (2/53) 5.77 0.000628 0.019349
GO:0031224 intrinsic component of membrane 9.43% (5/53) 2.91 0.000539 0.020742
GO:0008318 protein prenyltransferase activity 1.89% (1/53) 8.3 0.003178 0.023305
GO:0018342 protein prenylation 1.89% (1/53) 8.3 0.003178 0.023305
GO:0004659 prenyltransferase activity 1.89% (1/53) 8.3 0.003178 0.023305
GO:0006760 folic acid-containing compound metabolic process 1.89% (1/53) 8.3 0.003178 0.023305
GO:0097354 prenylation 1.89% (1/53) 8.3 0.003178 0.023305
GO:0006825 copper ion transport 1.89% (1/53) 8.3 0.003178 0.023305
GO:0016469 proton-transporting two-sector ATPase complex 1.89% (1/53) 8.3 0.003178 0.023305
GO:0016471 vacuolar proton-transporting V-type ATPase complex 1.89% (1/53) 8.3 0.003178 0.023305
GO:0033176 proton-transporting V-type ATPase complex 1.89% (1/53) 8.3 0.003178 0.023305
GO:0098662 inorganic cation transmembrane transport 3.77% (2/53) 4.49 0.003649 0.023411
GO:0098660 inorganic ion transmembrane transport 3.77% (2/53) 4.49 0.003649 0.023411
GO:0098655 cation transmembrane transport 3.77% (2/53) 4.49 0.003649 0.023411
GO:0042558 pteridine-containing compound metabolic process 1.89% (1/53) 7.97 0.003971 0.02446
GO:0016021 integral component of membrane 9.43% (5/53) 2.93 0.000499 0.025627
GO:0034220 ion transmembrane transport 3.77% (2/53) 4.28 0.004804 0.027402
GO:0000041 transition metal ion transport 1.89% (1/53) 7.71 0.004763 0.028213
GO:0051179 localization 9.43% (5/53) 2.08 0.006541 0.029628
GO:0051234 establishment of localization 9.43% (5/53) 2.09 0.006362 0.02969
GO:0048500 signal recognition particle 1.89% (1/53) 7.3 0.006346 0.03054
GO:0008312 7S RNA binding 1.89% (1/53) 7.3 0.006346 0.03054
GO:0005375 copper ion transmembrane transporter activity 1.89% (1/53) 8.71 0.002384 0.0306
GO:0035434 copper ion transmembrane transport 1.89% (1/53) 8.71 0.002384 0.0306
GO:0016125 sterol metabolic process 1.89% (1/53) 8.71 0.002384 0.0306
GO:0006810 transport 9.43% (5/53) 2.09 0.006309 0.032386
GO:0016192 vesicle-mediated transport 3.77% (2/53) 4.09 0.006269 0.033293
GO:0016853 isomerase activity 3.77% (2/53) 4.1 0.006188 0.034033
GO:0005739 mitochondrion 1.89% (1/53) 6.71 0.009504 0.041818
GO:0046915 transition metal ion transmembrane transporter activity 1.89% (1/53) 6.6 0.010292 0.044027
GO:0070972 protein localization to endoplasmic reticulum 1.89% (1/53) 6.21 0.013438 0.047033
GO:0072599 establishment of protein localization to endoplasmic reticulum 1.89% (1/53) 6.21 0.013438 0.047033
GO:0045047 protein targeting to ER 1.89% (1/53) 6.21 0.013438 0.047033
GO:0006614 SRP-dependent cotranslational protein targeting to membrane 1.89% (1/53) 6.21 0.013438 0.047033
GO:0006613 cotranslational protein targeting to membrane 1.89% (1/53) 6.21 0.013438 0.047033
GO:0006612 protein targeting to membrane 1.89% (1/53) 6.21 0.013438 0.047033
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_63 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_210 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_51 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_205 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_241 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_261 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_7 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_142 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_142 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_222 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_71 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_293 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_316 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_331 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_369 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_148 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_152 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_281 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_93 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_184 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_489 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_182 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_190 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_40 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_79 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_89 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_152 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_223 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_230 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_7 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_45 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_136 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_176 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_207 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_264 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_279 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_334 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_63 0.027 LandPlants Compare
Amborella trichopoda HCCA Cluster_102 0.017 LandPlants Compare
Amborella trichopoda HCCA Cluster_171 0.016 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_46 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_51 0.02 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_107 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_139 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_233 0.018 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_241 0.02 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_244 0.018 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_259 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_261 0.019 LandPlants Compare
Gingko biloba HCCA Cluster_142 0.02 LandPlants Compare
Gingko biloba HCCA Cluster_222 0.019 LandPlants Compare
Gingko biloba HCCA Cluster_357 0.017 LandPlants Compare
Marchantia polymorpha HCCA Cluster_1 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_71 0.021 LandPlants Compare
Marchantia polymorpha HCCA Cluster_153 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_72 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_197 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_254 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_273 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_293 0.022 LandPlants Compare
Oryza sativa HCCA Cluster_316 0.021 LandPlants Compare
Oryza sativa HCCA Cluster_332 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_369 0.02 LandPlants Compare
Physcomitrella patens HCCA Cluster_148 0.022 LandPlants Compare
Physcomitrella patens HCCA Cluster_150 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_152 0.036 LandPlants Compare
Physcomitrella patens HCCA Cluster_198 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_251 0.018 LandPlants Compare
Picea abies HCCA Cluster_93 0.023 LandPlants Compare
Picea abies HCCA Cluster_146 0.018 LandPlants Compare
Picea abies HCCA Cluster_184 0.019 LandPlants Compare
Picea abies HCCA Cluster_489 0.02 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_182 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_190 0.031 LandPlants Compare
Solanum lycopersicum HCCA Cluster_40 0.019 LandPlants Compare
Solanum lycopersicum HCCA Cluster_79 0.026 LandPlants Compare
Solanum lycopersicum HCCA Cluster_223 0.026 LandPlants Compare
Solanum lycopersicum HCCA Cluster_230 0.027 LandPlants Compare
Vitis vinifera HCCA Cluster_7 0.023 LandPlants Compare
Vitis vinifera HCCA Cluster_14 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_32 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_105 0.017 LandPlants Compare
Vitis vinifera HCCA Cluster_136 0.022 LandPlants Compare
Vitis vinifera HCCA Cluster_176 0.024 LandPlants Compare
Vitis vinifera HCCA Cluster_190 0.018 LandPlants Compare
Vitis vinifera HCCA Cluster_199 0.017 LandPlants Compare
Vitis vinifera HCCA Cluster_236 0.019 LandPlants Compare
Zea mays HCCA Cluster_15 0.017 LandPlants Compare
Zea mays HCCA Cluster_132 0.017 LandPlants Compare
Zea mays HCCA Cluster_264 0.024 LandPlants Compare
Zea mays HCCA Cluster_279 0.032 LandPlants Compare
Zea mays HCCA Cluster_288 0.016 LandPlants Compare
Zea mays HCCA Cluster_290 0.018 LandPlants Compare
Zea mays HCCA Cluster_350 0.018 LandPlants Compare
Zea mays HCCA Cluster_359 0.018 LandPlants Compare
Amborella trichopoda HCCA Cluster_27 0.013 SeedPlants Compare
Amborella trichopoda HCCA Cluster_63 0.027 SeedPlants Compare
Amborella trichopoda HCCA Cluster_122 0.012 SeedPlants Compare
Amborella trichopoda HCCA Cluster_190 0.014 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_12 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_40 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_51 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_117 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_139 0.014 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_241 0.02 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_259 0.017 SeedPlants Compare
Gingko biloba HCCA Cluster_222 0.019 SeedPlants Compare
Gingko biloba HCCA Cluster_357 0.017 SeedPlants Compare
Oryza sativa HCCA Cluster_72 0.015 SeedPlants Compare
Oryza sativa HCCA Cluster_96 0.014 SeedPlants Compare
Oryza sativa HCCA Cluster_183 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_197 0.017 SeedPlants Compare
Oryza sativa HCCA Cluster_277 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_293 0.022 SeedPlants Compare
Oryza sativa HCCA Cluster_316 0.021 SeedPlants Compare
Oryza sativa HCCA Cluster_332 0.015 SeedPlants Compare
Oryza sativa HCCA Cluster_369 0.019 SeedPlants Compare
Picea abies HCCA Cluster_490 0.012 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_40 0.019 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_79 0.026 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_152 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_223 0.026 SeedPlants Compare
Vitis vinifera HCCA Cluster_7 0.023 SeedPlants Compare
Vitis vinifera HCCA Cluster_32 0.016 SeedPlants Compare
Vitis vinifera HCCA Cluster_136 0.022 SeedPlants Compare
Vitis vinifera HCCA Cluster_176 0.023 SeedPlants Compare
Vitis vinifera HCCA Cluster_190 0.018 SeedPlants Compare
Vitis vinifera HCCA Cluster_236 0.019 SeedPlants Compare
Zea mays HCCA Cluster_44 0.013 SeedPlants Compare
Zea mays HCCA Cluster_67 0.012 SeedPlants Compare
Zea mays HCCA Cluster_132 0.017 SeedPlants Compare
Zea mays HCCA Cluster_264 0.024 SeedPlants Compare
Zea mays HCCA Cluster_279 0.031 SeedPlants Compare
Zea mays HCCA Cluster_288 0.016 SeedPlants Compare
Zea mays HCCA Cluster_334 0.013 SeedPlants Compare
Zea mays HCCA Cluster_338 0.014 SeedPlants Compare
Zea mays HCCA Cluster_350 0.018 SeedPlants Compare
Sequences (53) (download table)

InterPro Domains

GO Terms

Family Terms