Coexpression cluster: Cluster_82 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016070 RNA metabolic process 8.82% (15/170) 2.91 0.0 0.0
GO:0090304 nucleic acid metabolic process 9.41% (16/170) 2.54 0.0 2e-06
GO:0006139 nucleobase-containing compound metabolic process 9.41% (16/170) 2.2 0.0 3.9e-05
GO:0006725 cellular aromatic compound metabolic process 9.41% (16/170) 2.05 2e-06 8e-05
GO:0046483 heterocycle metabolic process 9.41% (16/170) 2.05 2e-06 9.4e-05
GO:1901360 organic cyclic compound metabolic process 9.41% (16/170) 2.0 3e-06 0.000102
GO:0140098 catalytic activity, acting on RNA 5.29% (9/170) 3.03 2e-06 0.000116
GO:0006351 transcription, DNA-templated 3.53% (6/170) 3.71 7e-06 0.000192
GO:0097659 nucleic acid-templated transcription 3.53% (6/170) 3.71 7e-06 0.000192
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 2.94% (5/170) 3.98 1.6e-05 0.000414
GO:0097747 RNA polymerase activity 2.94% (5/170) 3.84 2.6e-05 0.000557
GO:0034062 5'-3' RNA polymerase activity 2.94% (5/170) 3.84 2.6e-05 0.000557
GO:0032774 RNA biosynthetic process 3.53% (6/170) 3.12 7e-05 0.001289
GO:0034641 cellular nitrogen compound metabolic process 9.41% (16/170) 1.61 7.6e-05 0.001306
GO:0016071 mRNA metabolic process 2.35% (4/170) 4.19 6.7e-05 0.001329
GO:0006399 tRNA metabolic process 2.94% (5/170) 3.01 0.000401 0.006498
GO:0016779 nucleotidyltransferase activity 2.94% (5/170) 2.98 0.000441 0.006725
GO:0004812 aminoacyl-tRNA ligase activity 2.35% (4/170) 3.37 0.000616 0.007249
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.35% (4/170) 3.37 0.000616 0.007249
GO:0043039 tRNA aminoacylation 2.35% (4/170) 3.39 0.000578 0.00748
GO:0043038 amino acid activation 2.35% (4/170) 3.39 0.000578 0.00748
GO:0016874 ligase activity 2.94% (5/170) 2.91 0.000554 0.007978
GO:0006397 mRNA processing 1.76% (3/170) 4.05 0.000768 0.008648
GO:0034660 ncRNA metabolic process 2.94% (5/170) 2.75 0.000914 0.00986
GO:0034654 nucleobase-containing compound biosynthetic process 3.53% (6/170) 2.34 0.001274 0.013201
GO:0019899 enzyme binding 1.76% (3/170) 3.58 0.002034 0.01951
GO:0003676 nucleic acid binding 10.0% (17/170) 1.14 0.001961 0.019538
GO:0140101 catalytic activity, acting on a tRNA 2.35% (4/170) 2.83 0.002457 0.022723
GO:0019438 aromatic compound biosynthetic process 3.53% (6/170) 2.05 0.003487 0.031143
GO:0018130 heterocycle biosynthetic process 3.53% (6/170) 2.01 0.003964 0.034224
GO:0004198 calcium-dependent cysteine-type endopeptidase activity 0.59% (1/170) 7.28 0.006453 0.047749
GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity 0.59% (1/170) 7.28 0.006453 0.047749
GO:0005515 protein binding 11.18% (19/170) 0.92 0.005793 0.048404
GO:1901362 organic cyclic compound biosynthetic process 3.53% (6/170) 1.87 0.006366 0.049967
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_21 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_28 0.103 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_48 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_66 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_92 0.028 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_93 0.048 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_101 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_126 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_127 0.137 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_171 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_176 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_205 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_224 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_251 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.026 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_105 0.025 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_139 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_164 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_169 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_194 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_199 0.036 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_7 0.037 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_10 0.029 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_17 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_62 0.021 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_99 0.026 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_112 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_114 0.018 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_125 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_140 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_146 0.018 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_160 0.04 Gene family Compare
Oryza sativa HCCA cluster Cluster_2 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_26 0.053 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.041 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.039 Gene family Compare
Oryza sativa HCCA cluster Cluster_106 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_173 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_174 0.051 Gene family Compare
Oryza sativa HCCA cluster Cluster_182 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_189 0.03 Gene family Compare
Oryza sativa HCCA cluster Cluster_194 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_248 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_251 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_274 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_278 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_283 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_284 0.029 Gene family Compare
Oryza sativa HCCA cluster Cluster_297 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_317 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_335 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_24 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_57 0.032 Gene family Compare
Picea abies HCCA cluster Cluster_64 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_68 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_69 0.028 Gene family Compare
Picea abies HCCA cluster Cluster_82 0.074 Gene family Compare
Picea abies HCCA cluster Cluster_114 0.07 Gene family Compare
Picea abies HCCA cluster Cluster_209 0.022 Gene family Compare
Picea abies HCCA cluster Cluster_212 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_218 0.041 Gene family Compare
Picea abies HCCA cluster Cluster_223 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_235 0.035 Gene family Compare
Picea abies HCCA cluster Cluster_244 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_261 0.023 Gene family Compare
Picea abies HCCA cluster Cluster_283 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_343 0.058 Gene family Compare
Picea abies HCCA cluster Cluster_397 0.031 Gene family Compare
Picea abies HCCA cluster Cluster_434 0.043 Gene family Compare
Picea abies HCCA cluster Cluster_439 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_453 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_454 0.036 Gene family Compare
Picea abies HCCA cluster Cluster_462 0.026 Gene family Compare
Picea abies HCCA cluster Cluster_481 0.036 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_44 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_66 0.032 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_74 0.087 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_91 0.028 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_96 0.024 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_104 0.039 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_140 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_172 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_189 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_197 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_14 0.085 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_37 0.114 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_137 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_140 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_176 0.03 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_217 0.081 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_231 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_235 0.029 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_270 0.041 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_274 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_285 0.06 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_290 0.038 Gene family Compare
Vitis vinifera HCCA cluster Cluster_189 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.031 Gene family Compare
Vitis vinifera HCCA cluster Cluster_224 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_226 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_241 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_86 0.124 Gene family Compare
Zea mays HCCA cluster Cluster_120 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_139 0.034 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.041 Gene family Compare
Zea mays HCCA cluster Cluster_185 0.064 Gene family Compare
Zea mays HCCA cluster Cluster_189 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_198 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_266 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_271 0.06 Gene family Compare
Zea mays HCCA cluster Cluster_272 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_286 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_306 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_307 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_331 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_341 0.027 Gene family Compare
Zea mays HCCA cluster Cluster_349 0.02 Gene family Compare
Sequences (170) (download table)

InterPro Domains

GO Terms

Family Terms