Coexpression cluster: Cluster_16 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1990904 ribonucleoprotein complex 51.79% (116/224) 5.75 0.0 0.0
GO:0043604 amide biosynthetic process 51.79% (116/224) 5.85 0.0 0.0
GO:0043603 cellular amide metabolic process 51.79% (116/224) 5.8 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 50.45% (113/224) 5.75 0.0 0.0
GO:0043229 intracellular organelle 50.45% (113/224) 4.6 0.0 0.0
GO:0043228 non-membrane-bounded organelle 50.45% (113/224) 5.75 0.0 0.0
GO:0043226 organelle 50.45% (113/224) 4.6 0.0 0.0
GO:0043043 peptide biosynthetic process 51.79% (116/224) 5.88 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 54.02% (121/224) 5.31 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 54.02% (121/224) 4.2 0.0 0.0
GO:0044237 cellular metabolic process 56.25% (126/224) 2.83 0.0 0.0
GO:0044238 primary metabolic process 54.46% (122/224) 2.58 0.0 0.0
GO:0044249 cellular biosynthetic process 54.46% (122/224) 4.56 0.0 0.0
GO:1901576 organic substance biosynthetic process 54.46% (122/224) 4.49 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 52.23% (117/224) 5.23 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 52.68% (118/224) 3.14 0.0 0.0
GO:0071704 organic substance metabolic process 56.25% (126/224) 2.56 0.0 0.0
GO:0044444 cytoplasmic part 51.79% (116/224) 4.95 0.0 0.0
GO:0044424 intracellular part 53.12% (119/224) 3.81 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 52.68% (118/224) 5.0 0.0 0.0
GO:0044267 cellular protein metabolic process 51.79% (116/224) 3.68 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 54.46% (122/224) 3.4 0.0 0.0
GO:0032991 protein-containing complex 53.12% (119/224) 4.45 0.0 0.0
GO:0019538 protein metabolic process 52.23% (117/224) 3.36 0.0 0.0
GO:0043170 macromolecule metabolic process 55.8% (125/224) 3.04 0.0 0.0
GO:0005575 cellular_component 54.46% (122/224) 2.8 0.0 0.0
GO:0005622 intracellular 28.12% (63/224) 5.68 0.0 0.0
GO:0005198 structural molecule activity 51.79% (116/224) 5.77 0.0 0.0
GO:0044464 cell part 54.46% (122/224) 3.77 0.0 0.0
GO:0003735 structural constituent of ribosome 51.79% (116/224) 5.88 0.0 0.0
GO:0005840 ribosome 50.45% (113/224) 5.89 0.0 0.0
GO:0006412 translation 51.79% (116/224) 5.9 0.0 0.0
GO:0006518 peptide metabolic process 51.79% (116/224) 5.85 0.0 0.0
GO:0006807 nitrogen compound metabolic process 54.46% (122/224) 2.88 0.0 0.0
GO:0009987 cellular process 57.14% (128/224) 2.53 0.0 0.0
GO:0009059 macromolecule biosynthetic process 54.02% (121/224) 5.22 0.0 0.0
GO:0009058 biosynthetic process 54.46% (122/224) 4.34 0.0 0.0
GO:0008152 metabolic process 56.25% (126/224) 2.05 0.0 0.0
GO:0008150 biological_process 58.48% (131/224) 1.47 0.0 0.0
GO:0003674 molecular_function 68.3% (153/224) 0.99 0.0 0.0
GO:0003723 RNA binding 8.93% (20/224) 3.52 0.0 0.0
GO:0019843 rRNA binding 3.12% (7/224) 5.45 0.0 0.0
GO:0006414 translational elongation 1.79% (4/224) 5.7 1e-06 4e-06
GO:0003746 translation elongation factor activity 1.79% (4/224) 5.7 1e-06 4e-06
GO:0003676 nucleic acid binding 12.5% (28/224) 1.37 5e-06 2.2e-05
GO:0015934 large ribosomal subunit 1.34% (3/224) 6.28 5e-06 2.4e-05
GO:0044391 ribosomal subunit 1.34% (3/224) 6.28 5e-06 2.4e-05
GO:0008135 translation factor activity, RNA binding 1.79% (4/224) 3.93 0.000139 0.000632
GO:0008097 5S rRNA binding 0.89% (2/224) 6.28 0.000244 0.001087
GO:0022613 ribonucleoprotein complex biogenesis 0.89% (2/224) 4.58 0.003057 0.013066
GO:0042254 ribosome biogenesis 0.89% (2/224) 4.58 0.003057 0.013066
GO:0044085 cellular component biogenesis 0.89% (2/224) 4.28 0.004644 0.019467
GO:0009163 nucleoside biosynthetic process 0.45% (1/224) 7.28 0.006422 0.022951
GO:0006177 GMP biosynthetic process 0.45% (1/224) 7.28 0.006422 0.022951
GO:0042455 ribonucleoside biosynthetic process 0.45% (1/224) 7.28 0.006422 0.022951
GO:0046037 GMP metabolic process 0.45% (1/224) 7.28 0.006422 0.022951
GO:0046129 purine ribonucleoside biosynthetic process 0.45% (1/224) 7.28 0.006422 0.022951
GO:1901070 guanosine-containing compound biosynthetic process 0.45% (1/224) 7.28 0.006422 0.022951
GO:0042451 purine nucleoside biosynthetic process 0.45% (1/224) 7.28 0.006422 0.022951
GO:1901659 glycosyl compound biosynthetic process 0.45% (1/224) 7.28 0.006422 0.022951
GO:0003922 GMP synthase (glutamine-hydrolyzing) activity 0.45% (1/224) 7.28 0.006422 0.022951
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_32 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_61 0.032 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_85 0.44 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_133 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_146 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_163 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_170 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.064 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_204 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_211 0.2 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_236 0.021 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_43 0.441 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.025 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_128 0.02 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_10 0.02 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_27 0.503 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_60 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_64 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_87 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.022 Gene family Compare
Oryza sativa HCCA cluster Cluster_81 0.388 Gene family Compare
Oryza sativa HCCA cluster Cluster_119 0.108 Gene family Compare
Oryza sativa HCCA cluster Cluster_148 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_167 0.047 Gene family Compare
Oryza sativa HCCA cluster Cluster_183 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_199 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_236 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_256 0.05 Gene family Compare
Oryza sativa HCCA cluster Cluster_282 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_5 0.063 Gene family Compare
Picea abies HCCA cluster Cluster_17 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_63 0.048 Gene family Compare
Picea abies HCCA cluster Cluster_64 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_76 0.053 Gene family Compare
Picea abies HCCA cluster Cluster_93 0.022 Gene family Compare
Picea abies HCCA cluster Cluster_139 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_164 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_189 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_200 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_203 0.025 Gene family Compare
Picea abies HCCA cluster Cluster_239 0.115 Gene family Compare
Picea abies HCCA cluster Cluster_258 0.038 Gene family Compare
Picea abies HCCA cluster Cluster_276 0.084 Gene family Compare
Picea abies HCCA cluster Cluster_289 0.039 Gene family Compare
Picea abies HCCA cluster Cluster_318 0.027 Gene family Compare
Picea abies HCCA cluster Cluster_338 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_382 0.027 Gene family Compare
Picea abies HCCA cluster Cluster_398 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_425 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_429 0.048 Gene family Compare
Picea abies HCCA cluster Cluster_441 0.033 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_8 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_21 0.02 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_67 0.132 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_109 0.178 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_110 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_13 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_86 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_100 0.042 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_121 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_211 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_240 0.045 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_255 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_272 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_26 0.063 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.117 Gene family Compare
Vitis vinifera HCCA cluster Cluster_61 0.179 Gene family Compare
Vitis vinifera HCCA cluster Cluster_69 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_77 0.163 Gene family Compare
Vitis vinifera HCCA cluster Cluster_78 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_91 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_114 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_155 0.222 Gene family Compare
Vitis vinifera HCCA cluster Cluster_207 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_234 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_54 0.315 Gene family Compare
Zea mays HCCA cluster Cluster_78 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_140 0.127 Gene family Compare
Zea mays HCCA cluster Cluster_162 0.063 Gene family Compare
Zea mays HCCA cluster Cluster_182 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_203 0.239 Gene family Compare
Zea mays HCCA cluster Cluster_220 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_221 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_259 0.053 Gene family Compare
Zea mays HCCA cluster Cluster_262 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_274 0.094 Gene family Compare
Zea mays HCCA cluster Cluster_294 0.029 Gene family Compare
Zea mays HCCA cluster Cluster_333 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_345 0.062 Gene family Compare
Sequences (224) (download table)

InterPro Domains

GO Terms

Family Terms