Coexpression cluster: Cluster_240 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044444 cytoplasmic part 29.82% (17/57) 4.15 0.0 0.0
GO:0043228 non-membrane-bounded organelle 24.56% (14/57) 4.71 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 24.56% (14/57) 4.71 0.0 0.0
GO:1990904 ribonucleoprotein complex 24.56% (14/57) 4.67 0.0 0.0
GO:0032991 protein-containing complex 31.58% (18/57) 3.7 0.0 0.0
GO:0005840 ribosome 22.81% (13/57) 4.75 0.0 0.0
GO:0044464 cell part 36.84% (21/57) 3.21 0.0 0.0
GO:0003735 structural constituent of ribosome 22.81% (13/57) 4.7 0.0 0.0
GO:0005198 structural molecule activity 22.81% (13/57) 4.59 0.0 0.0
GO:0044424 intracellular part 35.09% (20/57) 3.21 0.0 0.0
GO:0043226 organelle 28.07% (16/57) 3.76 0.0 0.0
GO:0043229 intracellular organelle 28.07% (16/57) 3.76 0.0 0.0
GO:0006412 translation 21.05% (12/57) 4.6 0.0 0.0
GO:0043043 peptide biosynthetic process 21.05% (12/57) 4.58 0.0 0.0
GO:0006518 peptide metabolic process 21.05% (12/57) 4.55 0.0 0.0
GO:0043604 amide biosynthetic process 21.05% (12/57) 4.55 0.0 0.0
GO:0043603 cellular amide metabolic process 21.05% (12/57) 4.5 0.0 0.0
GO:0005622 intracellular 17.54% (10/57) 4.99 0.0 0.0
GO:0009059 macromolecule biosynthetic process 22.81% (13/57) 3.97 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 22.81% (13/57) 3.79 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 21.05% (12/57) 3.95 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 21.05% (12/57) 3.92 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 26.32% (15/57) 3.16 0.0 0.0
GO:0005575 cellular_component 38.6% (22/57) 2.3 0.0 0.0
GO:0044249 cellular biosynthetic process 22.81% (13/57) 3.31 0.0 0.0
GO:1901576 organic substance biosynthetic process 22.81% (13/57) 3.23 0.0 0.0
GO:0009058 biosynthetic process 22.81% (13/57) 3.08 0.0 0.0
GO:0044237 cellular metabolic process 29.82% (17/57) 1.91 1e-06 7e-06
GO:0044267 cellular protein metabolic process 21.05% (12/57) 2.38 2e-06 1.3e-05
GO:0098799 outer mitochondrial membrane protein complex 3.51% (2/57) 9.26 3e-06 1.4e-05
GO:0005742 mitochondrial outer membrane translocase complex 3.51% (2/57) 9.26 3e-06 1.4e-05
GO:0043170 macromolecule metabolic process 26.32% (15/57) 1.96 4e-06 2e-05
GO:0044455 mitochondrial membrane part 5.26% (3/57) 6.52 5e-06 2.3e-05
GO:0098798 mitochondrial protein complex 5.26% (3/57) 6.45 5e-06 2.6e-05
GO:0009987 cellular process 31.58% (18/57) 1.67 6e-06 2.6e-05
GO:0071806 protein transmembrane transport 3.51% (2/57) 8.67 8e-06 3.1e-05
GO:0070585 protein localization to mitochondrion 3.51% (2/57) 8.67 8e-06 3.1e-05
GO:0030150 protein import into mitochondrial matrix 3.51% (2/57) 8.67 8e-06 3.1e-05
GO:0044743 protein transmembrane import into intracellular organelle 3.51% (2/57) 8.67 8e-06 3.1e-05
GO:0072655 establishment of protein localization to mitochondrion 3.51% (2/57) 8.67 8e-06 3.1e-05
GO:0065002 intracellular protein transmembrane transport 3.51% (2/57) 8.67 8e-06 3.1e-05
GO:0006807 nitrogen compound metabolic process 26.32% (15/57) 1.83 1.2e-05 4.7e-05
GO:0019538 protein metabolic process 21.05% (12/57) 2.05 2.4e-05 8.9e-05
GO:0044260 cellular macromolecule metabolic process 21.05% (12/57) 2.03 2.8e-05 0.000103
GO:0006839 mitochondrial transport 3.51% (2/57) 7.26 7.3e-05 0.000256
GO:1990542 mitochondrial transmembrane transport 3.51% (2/57) 7.26 7.3e-05 0.000256
GO:0044429 mitochondrial part 5.26% (3/57) 5.2 7.7e-05 0.000263
GO:1901564 organonitrogen compound metabolic process 21.05% (12/57) 1.82 0.000116 0.000388
GO:0044238 primary metabolic process 26.32% (15/57) 1.53 0.000133 0.000437
GO:0017038 protein import 3.51% (2/57) 6.8 0.000143 0.00046
GO:0005739 mitochondrion 3.51% (2/57) 6.67 0.000171 0.000541
GO:0071704 organic substance metabolic process 26.32% (15/57) 1.46 0.00022 0.000682
GO:0044446 intracellular organelle part 8.77% (5/57) 3.12 0.000277 0.000826
GO:0044422 organelle part 8.77% (5/57) 3.12 0.000277 0.000826
GO:0033365 protein localization to organelle 3.51% (2/57) 5.67 0.000708 0.002034
GO:0072594 establishment of protein localization to organelle 3.51% (2/57) 5.67 0.000708 0.002034
GO:0019843 rRNA binding 3.51% (2/57) 5.61 0.000768 0.00217
GO:0034613 cellular protein localization 3.51% (2/57) 5.45 0.000965 0.002634
GO:0070727 cellular macromolecule localization 3.51% (2/57) 5.45 0.000965 0.002634
GO:0003723 RNA binding 7.02% (4/57) 3.18 0.001019 0.002734
GO:0008152 metabolic process 29.82% (17/57) 1.14 0.001069 0.002821
GO:0008535 respiratory chain complex IV assembly 1.75% (1/57) 9.26 0.001634 0.004048
GO:0030686 90S preribosome 1.75% (1/57) 9.26 0.001634 0.004048
GO:0033108 mitochondrial respiratory chain complex assembly 1.75% (1/57) 9.26 0.001634 0.004048
GO:0033617 mitochondrial respiratory chain complex IV assembly 1.75% (1/57) 9.26 0.001634 0.004048
GO:0030490 maturation of SSU-rRNA 1.75% (1/57) 8.26 0.003266 0.007511
GO:0005672 transcription factor TFIIA complex 1.75% (1/57) 8.26 0.003266 0.007511
GO:0030515 snoRNA binding 1.75% (1/57) 8.26 0.003266 0.007511
GO:0030688 preribosome, small subunit precursor 1.75% (1/57) 8.26 0.003266 0.007511
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.75% (1/57) 8.26 0.003266 0.007511
GO:0098796 membrane protein complex 5.26% (3/57) 3.19 0.004389 0.009952
GO:0005747 mitochondrial respiratory chain complex I 1.75% (1/57) 7.67 0.004895 0.010507
GO:0045271 respiratory chain complex I 1.75% (1/57) 7.67 0.004895 0.010507
GO:0030964 NADH dehydrogenase complex 1.75% (1/57) 7.67 0.004895 0.010507
GO:0008150 biological_process 36.84% (21/57) 0.8 0.004721 0.010556
GO:0005730 nucleolus 1.75% (1/57) 6.67 0.009766 0.02042
GO:0098803 respiratory chain complex 1.75% (1/57) 6.67 0.009766 0.02042
GO:0006886 intracellular protein transport 3.51% (2/57) 3.72 0.010205 0.021065
GO:0044428 nuclear part 3.51% (2/57) 3.56 0.012632 0.025743
GO:0030684 preribosome 1.75% (1/57) 6.26 0.013 0.026164
GO:0090575 RNA polymerase II transcription factor complex 1.75% (1/57) 6.09 0.014614 0.028347
GO:0044798 nuclear transcription factor complex 1.75% (1/57) 6.09 0.014614 0.028347
GO:0006367 transcription initiation from RNA polymerase II promoter 1.75% (1/57) 6.09 0.014614 0.028347
GO:0046907 intracellular transport 3.51% (2/57) 3.42 0.015033 0.028475
GO:0051649 establishment of localization in cell 3.51% (2/57) 3.42 0.015033 0.028475
GO:0017004 cytochrome complex assembly 1.75% (1/57) 5.8 0.017833 0.033385
GO:0045184 establishment of protein localization 3.51% (2/57) 3.16 0.021231 0.036755
GO:0022613 ribonucleoprotein complex biogenesis 1.75% (1/57) 5.56 0.021041 0.036822
GO:0042254 ribosome biogenesis 1.75% (1/57) 5.56 0.021041 0.036822
GO:0015031 protein transport 3.51% (2/57) 3.18 0.020656 0.036951
GO:0042886 amide transport 3.51% (2/57) 3.18 0.020656 0.036951
GO:0015833 peptide transport 3.51% (2/57) 3.18 0.020656 0.036951
GO:0008104 protein localization 3.51% (2/57) 3.14 0.021812 0.036966
GO:0033036 macromolecule localization 3.51% (2/57) 3.14 0.021812 0.036966
GO:0051641 cellular localization 3.51% (2/57) 3.2 0.020088 0.037174
GO:0005667 transcription factor complex 1.75% (1/57) 5.35 0.02424 0.040652
GO:0016070 RNA metabolic process 5.26% (3/57) 2.27 0.024508 0.040679
GO:0044085 cellular component biogenesis 1.75% (1/57) 5.26 0.025835 0.042443
GO:0001522 pseudouridine synthesis 1.75% (1/57) 5.17 0.027428 0.044605
GO:0098800 inner mitochondrial membrane protein complex 1.75% (1/57) 5.09 0.029018 0.046719
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_21 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_24 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_77 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_85 0.067 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_97 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_152 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_173 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_204 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_211 0.039 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_225 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_236 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_237 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_264 0.023 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_43 0.024 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_81 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_105 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_8 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_27 0.055 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_60 0.045 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_124 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_81 0.049 Gene family Compare
Oryza sativa HCCA cluster Cluster_119 0.04 Gene family Compare
Oryza sativa HCCA cluster Cluster_145 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_148 0.025 Gene family Compare
Oryza sativa HCCA cluster Cluster_167 0.026 Gene family Compare
Oryza sativa HCCA cluster Cluster_183 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_205 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_242 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_256 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_258 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_311 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_551 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_5 0.026 Gene family Compare
Picea abies HCCA cluster Cluster_76 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_203 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_206 0.029 Gene family Compare
Picea abies HCCA cluster Cluster_239 0.027 Gene family Compare
Picea abies HCCA cluster Cluster_276 0.029 Gene family Compare
Picea abies HCCA cluster Cluster_289 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_338 0.025 Gene family Compare
Picea abies HCCA cluster Cluster_425 0.027 Gene family Compare
Picea abies HCCA cluster Cluster_492 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_955 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_20 0.024 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_67 0.042 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_103 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_16 0.045 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_100 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_131 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_211 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_277 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_304 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_26 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_47 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_49 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_55 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_61 0.054 Gene family Compare
Vitis vinifera HCCA cluster Cluster_69 0.023 Gene family Compare
Vitis vinifera HCCA cluster Cluster_77 0.039 Gene family Compare
Vitis vinifera HCCA cluster Cluster_78 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_154 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_155 0.035 Gene family Compare
Vitis vinifera HCCA cluster Cluster_159 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_43 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_48 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_54 0.039 Gene family Compare
Zea mays HCCA cluster Cluster_78 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_84 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_92 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_96 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_109 0.032 Gene family Compare
Zea mays HCCA cluster Cluster_140 0.039 Gene family Compare
Zea mays HCCA cluster Cluster_175 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_193 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_203 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_204 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_213 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_257 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_259 0.031 Gene family Compare
Zea mays HCCA cluster Cluster_294 0.049 Gene family Compare
Zea mays HCCA cluster Cluster_310 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_316 0.021 Gene family Compare
Sequences (57) (download table)

InterPro Domains

GO Terms

Family Terms