Coexpression cluster: Cluster_277 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006396 RNA processing 6.67% (5/75) 5.0 1e-06 7.5e-05
GO:0006378 mRNA polyadenylation 2.67% (2/75) 9.21 4e-06 0.000166
GO:0005849 mRNA cleavage factor complex 2.67% (2/75) 9.21 4e-06 0.000166
GO:0031124 mRNA 3'-end processing 2.67% (2/75) 8.8 7e-06 0.000249
GO:0031123 RNA 3'-end processing 2.67% (2/75) 8.21 1.9e-05 0.000355
GO:0017150 tRNA dihydrouridine synthase activity 2.67% (2/75) 8.21 1.9e-05 0.000355
GO:0003729 mRNA binding 2.67% (2/75) 8.21 1.9e-05 0.000355
GO:0034470 ncRNA processing 4.0% (3/75) 5.52 4e-05 0.000672
GO:0016070 RNA metabolic process 6.67% (5/75) 3.6 6.1e-05 0.000905
GO:0043631 RNA polyadenylation 2.67% (2/75) 7.21 8.2e-05 0.001089
GO:0090304 nucleic acid metabolic process 6.67% (5/75) 3.18 0.000238 0.00288
GO:0016787 hydrolase activity 13.33% (10/75) 1.94 0.00027 0.002991
GO:0016887 ATPase activity 5.33% (4/75) 3.65 0.00031 0.003167
GO:0034660 ncRNA metabolic process 4.0% (3/75) 4.47 0.00035 0.003324
GO:0017111 nucleoside-triphosphatase activity 6.67% (5/75) 3.0 0.000427 0.00379
GO:0016817 hydrolase activity, acting on acid anhydrides 6.67% (5/75) 2.92 0.000546 0.004035
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.67% (5/75) 2.92 0.000538 0.004207
GO:0016462 pyrophosphatase activity 6.67% (5/75) 2.93 0.000517 0.004301
GO:0008033 tRNA processing 2.67% (2/75) 5.75 0.000645 0.004517
GO:0006139 nucleobase-containing compound metabolic process 6.67% (5/75) 2.75 0.00091 0.006048
GO:0051536 iron-sulfur cluster binding 2.67% (2/75) 5.34 0.001147 0.006356
GO:0051540 metal cluster binding 2.67% (2/75) 5.34 0.001147 0.006356
GO:0006397 mRNA processing 2.67% (2/75) 5.37 0.001096 0.006623
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors 2.67% (2/75) 5.37 0.001096 0.006623
GO:0016071 mRNA metabolic process 2.67% (2/75) 5.15 0.001479 0.007866
GO:0046483 heterocycle metabolic process 6.67% (5/75) 2.58 0.001561 0.007988
GO:0006725 cellular aromatic compound metabolic process 6.67% (5/75) 2.53 0.001803 0.008881
GO:1901360 organic cyclic compound metabolic process 6.67% (5/75) 2.44 0.002317 0.010628
GO:0003855 3-dehydroquinate dehydratase activity 1.33% (1/75) 8.8 0.00225 0.010687
GO:0003824 catalytic activity 25.33% (19/75) 0.98 0.002519 0.011167
GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity 1.33% (1/75) 8.21 0.003373 0.014471
GO:0140101 catalytic activity, acting on a tRNA 2.67% (2/75) 4.39 0.004201 0.01746
GO:0030688 preribosome, small subunit precursor 1.33% (1/75) 7.8 0.004495 0.018116
GO:0006399 tRNA metabolic process 2.67% (2/75) 4.23 0.005216 0.020404
GO:0030151 molybdenum ion binding 1.33% (1/75) 7.47 0.005615 0.021339
GO:0034641 cellular nitrogen compound metabolic process 6.67% (5/75) 2.1 0.006338 0.022184
GO:0032991 protein-containing complex 5.33% (4/75) 2.46 0.006247 0.022457
GO:0140513 nuclear protein-containing complex 2.67% (2/75) 4.09 0.006216 0.022966
GO:0050660 flavin adenine dinucleotide binding 2.67% (2/75) 3.71 0.010411 0.032201
GO:1901363 heterocyclic compound binding 17.33% (13/75) 1.03 0.010251 0.032462
GO:0097159 organic cyclic compound binding 17.33% (13/75) 1.03 0.010251 0.032462
GO:0009507 chloroplast 1.33% (1/75) 6.63 0.010085 0.033534
GO:0009536 plastid 1.33% (1/75) 6.63 0.010085 0.033534
GO:0016409 palmitoyltransferase activity 1.33% (1/75) 6.34 0.012313 0.037219
GO:0030684 preribosome 1.33% (1/75) 6.21 0.013425 0.039678
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_1 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_33 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_66 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_113 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_132 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_32 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_51 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_61 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_155 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_223 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_288 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_75 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_82 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_119 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_147 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_35 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_81 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_208 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_263 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_326 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_13 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_148 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_192 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_215 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_247 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_313 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_355 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_480 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_12 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_174 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_56 0.04 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_138 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_164 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_219 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_260 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_135 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_167 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_185 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_187 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_201 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_238 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_104 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_176 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_295 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_335 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_1 0.024 LandPlants Compare
Amborella trichopoda HCCA Cluster_138 0.015 LandPlants Compare
Amborella trichopoda HCCA Cluster_161 0.017 LandPlants Compare
Amborella trichopoda HCCA Cluster_231 0.016 LandPlants Compare
Amborella trichopoda HCCA Cluster_233 0.018 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_33 0.019 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_113 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_132 0.024 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_206 0.014 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_219 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_230 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_249 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_44 0.018 LandPlants Compare
Gingko biloba HCCA Cluster_51 0.021 LandPlants Compare
Gingko biloba HCCA Cluster_59 0.018 LandPlants Compare
Gingko biloba HCCA Cluster_101 0.017 LandPlants Compare
Gingko biloba HCCA Cluster_169 0.017 LandPlants Compare
Gingko biloba HCCA Cluster_194 0.017 LandPlants Compare
Gingko biloba HCCA Cluster_223 0.017 LandPlants Compare
Gingko biloba HCCA Cluster_228 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_247 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_288 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_68 0.018 LandPlants Compare
Marchantia polymorpha HCCA Cluster_82 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_119 0.024 LandPlants Compare
Marchantia polymorpha HCCA Cluster_147 0.025 LandPlants Compare
Oryza sativa HCCA Cluster_35 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_79 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_81 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_263 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_326 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_332 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_339 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_275 0.022 LandPlants Compare
Picea abies HCCA Cluster_24 0.016 LandPlants Compare
Picea abies HCCA Cluster_97 0.015 LandPlants Compare
Picea abies HCCA Cluster_107 0.017 LandPlants Compare
Picea abies HCCA Cluster_192 0.019 LandPlants Compare
Picea abies HCCA Cluster_201 0.021 LandPlants Compare
Picea abies HCCA Cluster_215 0.02 LandPlants Compare
Picea abies HCCA Cluster_247 0.019 LandPlants Compare
Picea abies HCCA Cluster_313 0.019 LandPlants Compare
Picea abies HCCA Cluster_355 0.025 LandPlants Compare
Picea abies HCCA Cluster_362 0.014 LandPlants Compare
Picea abies HCCA Cluster_426 0.015 LandPlants Compare
Picea abies HCCA Cluster_428 0.025 LandPlants Compare
Picea abies HCCA Cluster_446 0.017 LandPlants Compare
Picea abies HCCA Cluster_466 0.015 LandPlants Compare
Picea abies HCCA Cluster_480 0.017 LandPlants Compare
Picea abies HCCA Cluster_499 0.017 LandPlants Compare
Picea abies HCCA Cluster_535 0.018 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_12 0.018 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_109 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_202 0.017 LandPlants Compare
Solanum lycopersicum HCCA Cluster_56 0.019 LandPlants Compare
Solanum lycopersicum HCCA Cluster_111 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_131 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_132 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_161 0.018 LandPlants Compare
Solanum lycopersicum HCCA Cluster_188 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_243 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_71 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_94 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_167 0.026 LandPlants Compare
Vitis vinifera HCCA Cluster_187 0.018 LandPlants Compare
Vitis vinifera HCCA Cluster_205 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_237 0.016 LandPlants Compare
Zea mays HCCA Cluster_46 0.016 LandPlants Compare
Zea mays HCCA Cluster_55 0.015 LandPlants Compare
Zea mays HCCA Cluster_104 0.019 LandPlants Compare
Zea mays HCCA Cluster_201 0.016 LandPlants Compare
Zea mays HCCA Cluster_257 0.018 LandPlants Compare
Zea mays HCCA Cluster_262 0.017 LandPlants Compare
Zea mays HCCA Cluster_350 0.017 LandPlants Compare
Zea mays HCCA Cluster_358 0.017 LandPlants Compare
Amborella trichopoda HCCA Cluster_138 0.015 SeedPlants Compare
Amborella trichopoda HCCA Cluster_231 0.012 SeedPlants Compare
Amborella trichopoda HCCA Cluster_261 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_132 0.015 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_219 0.014 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_230 0.015 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_249 0.015 SeedPlants Compare
Gingko biloba HCCA Cluster_44 0.017 SeedPlants Compare
Gingko biloba HCCA Cluster_169 0.016 SeedPlants Compare
Gingko biloba HCCA Cluster_247 0.015 SeedPlants Compare
Oryza sativa HCCA Cluster_35 0.015 SeedPlants Compare
Oryza sativa HCCA Cluster_81 0.018 SeedPlants Compare
Oryza sativa HCCA Cluster_339 0.015 SeedPlants Compare
Picea abies HCCA Cluster_107 0.017 SeedPlants Compare
Picea abies HCCA Cluster_111 0.012 SeedPlants Compare
Picea abies HCCA Cluster_129 0.012 SeedPlants Compare
Picea abies HCCA Cluster_192 0.018 SeedPlants Compare
Picea abies HCCA Cluster_201 0.013 SeedPlants Compare
Picea abies HCCA Cluster_247 0.018 SeedPlants Compare
Picea abies HCCA Cluster_355 0.016 SeedPlants Compare
Picea abies HCCA Cluster_362 0.014 SeedPlants Compare
Picea abies HCCA Cluster_428 0.024 SeedPlants Compare
Picea abies HCCA Cluster_466 0.015 SeedPlants Compare
Picea abies HCCA Cluster_499 0.016 SeedPlants Compare
Picea abies HCCA Cluster_535 0.017 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_132 0.016 SeedPlants Compare
Vitis vinifera HCCA Cluster_94 0.015 SeedPlants Compare
Vitis vinifera HCCA Cluster_167 0.025 SeedPlants Compare
Vitis vinifera HCCA Cluster_187 0.018 SeedPlants Compare
Zea mays HCCA Cluster_47 0.013 SeedPlants Compare
Zea mays HCCA Cluster_104 0.012 SeedPlants Compare
Zea mays HCCA Cluster_257 0.017 SeedPlants Compare
Zea mays HCCA Cluster_295 0.014 SeedPlants Compare
Zea mays HCCA Cluster_338 0.013 SeedPlants Compare
Zea mays HCCA Cluster_350 0.016 SeedPlants Compare
Zea mays HCCA Cluster_358 0.017 SeedPlants Compare
Sequences (75) (download table)

InterPro Domains

GO Terms

Family Terms