Coexpression cluster: Cluster_121 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003723 RNA binding 6.17% (10/162) 2.99 1e-06 0.00014
GO:0016072 rRNA metabolic process 2.47% (4/162) 5.23 4e-06 0.000278
GO:0006364 rRNA processing 2.47% (4/162) 5.23 4e-06 0.000278
GO:0005634 nucleus 5.56% (9/162) 2.69 1.3e-05 0.000707
GO:0031369 translation initiation factor binding 1.23% (2/162) 7.17 6.4e-05 0.002886
GO:0016070 RNA metabolic process 5.56% (9/162) 2.35 7.8e-05 0.002944
GO:0003676 nucleic acid binding 12.35% (20/162) 1.35 0.000119 0.002972
GO:0043227 membrane-bounded organelle 5.56% (9/162) 2.28 0.000109 0.003071
GO:0043231 intracellular membrane-bounded organelle 5.56% (9/162) 2.28 0.000109 0.003071
GO:0043229 intracellular organelle 7.41% (12/162) 1.83 0.000157 0.003206
GO:0043226 organelle 7.41% (12/162) 1.83 0.000157 0.003206
GO:0006396 RNA processing 3.7% (6/162) 2.81 0.00023 0.004311
GO:0044464 cell part 10.49% (17/162) 1.39 0.000276 0.004775
GO:0005852 eukaryotic translation initiation factor 3 complex 1.23% (2/162) 6.17 0.000318 0.005106
GO:0030684 preribosome 1.23% (2/162) 5.75 0.000589 0.008288
GO:0090304 nucleic acid metabolic process 5.56% (9/162) 1.95 0.000581 0.008721
GO:0034470 ncRNA processing 2.47% (4/162) 3.18 0.001028 0.013604
GO:0044424 intracellular part 9.26% (15/162) 1.29 0.0013 0.016255
GO:0008380 RNA splicing 1.23% (2/162) 4.75 0.002465 0.029191
GO:0005732 small nucleolar ribonucleoprotein complex 0.62% (1/162) 7.75 0.004645 0.031668
GO:0004004 ATP-dependent RNA helicase activity 0.62% (1/162) 7.75 0.004645 0.031668
GO:0003724 RNA helicase activity 0.62% (1/162) 7.75 0.004645 0.031668
GO:0008186 RNA-dependent ATPase activity 0.62% (1/162) 7.75 0.004645 0.031668
GO:0080009 mRNA methylation 0.62% (1/162) 7.75 0.004645 0.031668
GO:0016556 mRNA modification 0.62% (1/162) 7.75 0.004645 0.031668
GO:0034457 Mpp10 complex 0.62% (1/162) 7.75 0.004645 0.031668
GO:0044452 nucleolar part 0.62% (1/162) 7.75 0.004645 0.031668
GO:0000350 generation of catalytic spliceosome for second transesterification step 0.62% (1/162) 7.75 0.004645 0.031668
GO:0035145 exon-exon junction complex 0.62% (1/162) 7.75 0.004645 0.031668
GO:0034641 cellular nitrogen compound metabolic process 7.41% (12/162) 1.33 0.003177 0.035736
GO:0034660 ncRNA metabolic process 2.47% (4/162) 2.68 0.003606 0.036881
GO:0006139 nucleobase-containing compound metabolic process 5.56% (9/162) 1.58 0.003456 0.037026
GO:0046483 heterocycle metabolic process 5.56% (9/162) 1.45 0.006039 0.038825
GO:0006725 cellular aromatic compound metabolic process 5.56% (9/162) 1.44 0.006257 0.039109
GO:0003743 translation initiation factor activity 1.23% (2/162) 4.11 0.005996 0.039681
GO:0006413 translational initiation 1.23% (2/162) 4.36 0.004249 0.041563
GO:1901360 organic cyclic compound metabolic process 5.56% (9/162) 1.41 0.007314 0.044478
GO:0032259 methylation 1.23% (2/162) 3.89 0.008017 0.047468
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_21 0.044 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_28 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_39 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_47 0.04 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_48 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_61 0.067 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_85 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_93 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_124 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.044 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_204 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_215 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_224 0.021 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_31 0.023 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.049 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_148 0.016 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_166 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_183 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_10 0.094 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_60 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_99 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_114 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_124 0.021 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_165 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_26 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_28 0.048 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.065 Gene family Compare
Oryza sativa HCCA cluster Cluster_81 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_119 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_148 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_182 0.055 Gene family Compare
Oryza sativa HCCA cluster Cluster_205 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_283 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_284 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_297 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_306 0.023 Gene family Compare
Picea abies HCCA cluster Cluster_63 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_73 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_248 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_258 0.032 Gene family Compare
Picea abies HCCA cluster Cluster_276 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_283 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_326 0.03 Gene family Compare
Picea abies HCCA cluster Cluster_339 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_425 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_432 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_465 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_41 0.028 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_55 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_66 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_91 0.025 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_102 0.036 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_103 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_138 0.041 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_148 0.026 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_16 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_59 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_152 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_254 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.047 Gene family Compare
Vitis vinifera HCCA cluster Cluster_47 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_85 0.03 Gene family Compare
Vitis vinifera HCCA cluster Cluster_96 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_99 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_121 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_149 0.041 Gene family Compare
Vitis vinifera HCCA cluster Cluster_155 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_171 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_172 0.033 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_228 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_236 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_245 0.031 Gene family Compare
Zea mays HCCA cluster Cluster_15 0.035 Gene family Compare
Zea mays HCCA cluster Cluster_80 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.03 Gene family Compare
Zea mays HCCA cluster Cluster_162 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_172 0.086 Gene family Compare
Zea mays HCCA cluster Cluster_173 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_191 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_211 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_221 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_257 0.027 Gene family Compare
Zea mays HCCA cluster Cluster_262 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_272 0.043 Gene family Compare
Zea mays HCCA cluster Cluster_281 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_294 0.031 Gene family Compare
Zea mays HCCA cluster Cluster_307 0.06 Gene family Compare
Zea mays HCCA cluster Cluster_346 0.055 Gene family Compare
Sequences (162) (download table)

InterPro Domains

GO Terms

Family Terms