Coexpression cluster: Cluster_56 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003735 structural constituent of ribosome 26.53% (13/49) 6.32 0.0 0.0
GO:0006412 translation 26.53% (13/49) 6.34 0.0 0.0
GO:0005840 ribosome 26.53% (13/49) 6.37 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 26.53% (13/49) 6.15 0.0 0.0
GO:0043604 amide biosynthetic process 26.53% (13/49) 6.17 0.0 0.0
GO:0006518 peptide metabolic process 26.53% (13/49) 6.14 0.0 0.0
GO:0005198 structural molecule activity 26.53% (13/49) 6.19 0.0 0.0
GO:0043043 peptide biosynthetic process 26.53% (13/49) 6.2 0.0 0.0
GO:0043603 amide metabolic process 26.53% (13/49) 6.09 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 26.53% (13/49) 6.02 0.0 0.0
GO:0043228 non-membrane-bounded organelle 26.53% (13/49) 6.02 0.0 0.0
GO:0043229 intracellular organelle 28.57% (14/49) 5.19 0.0 0.0
GO:0043226 organelle 28.57% (14/49) 5.18 0.0 0.0
GO:0009059 macromolecule biosynthetic process 26.53% (13/49) 5.37 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 26.53% (13/49) 5.09 0.0 0.0
GO:0005622 intracellular anatomical structure 18.37% (9/49) 6.04 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 26.53% (13/49) 4.3 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 26.53% (13/49) 4.19 0.0 0.0
GO:0110165 cellular anatomical entity 30.61% (15/49) 3.7 0.0 0.0
GO:0044249 cellular biosynthetic process 26.53% (13/49) 3.95 0.0 0.0
GO:1901576 organic substance biosynthetic process 26.53% (13/49) 3.86 0.0 0.0
GO:0005575 cellular_component 32.65% (16/49) 3.22 0.0 0.0
GO:0009058 biosynthetic process 26.53% (13/49) 3.73 0.0 0.0
GO:0019538 protein metabolic process 28.57% (14/49) 3.39 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 28.57% (14/49) 2.98 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 26.53% (13/49) 3.06 0.0 0.0
GO:0043170 macromolecule metabolic process 28.57% (14/49) 2.63 0.0 0.0
GO:0006807 nitrogen compound metabolic process 28.57% (14/49) 2.29 1e-06 2e-06
GO:0009987 cellular process 34.69% (17/49) 1.96 1e-06 2e-06
GO:0008150 biological_process 38.78% (19/49) 1.71 1e-06 5e-06
GO:0044238 primary metabolic process 28.57% (14/49) 2.17 1e-06 5e-06
GO:0044237 cellular metabolic process 26.53% (13/49) 2.3 1e-06 5e-06
GO:0071704 organic substance metabolic process 28.57% (14/49) 2.1 2e-06 8e-06
GO:0008152 metabolic process 28.57% (14/49) 1.98 6e-06 1.9e-05
GO:0042254 ribosome biogenesis 4.08% (2/49) 6.52 0.00021 0.000623
GO:0022613 ribonucleoprotein complex biogenesis 4.08% (2/49) 6.52 0.00021 0.000623
GO:0044085 cellular component biogenesis 4.08% (2/49) 6.39 0.000251 0.000726
GO:0003674 molecular_function 42.86% (21/49) 1.04 0.00042 0.001184
GO:0071840 cellular component organization or biogenesis 6.12% (3/49) 3.72 0.001549 0.004251
GO:0006334 nucleosome assembly 2.04% (1/49) 6.98 0.007911 0.019687
GO:0065004 protein-DNA complex assembly 2.04% (1/49) 6.98 0.007911 0.019687
GO:0034728 nucleosome organization 2.04% (1/49) 6.98 0.007911 0.019687
GO:0071824 protein-DNA complex subunit organization 2.04% (1/49) 6.98 0.007911 0.019687
GO:0006338 chromatin remodeling 2.04% (1/49) 6.39 0.011844 0.028163
GO:0035091 phosphatidylinositol binding 2.04% (1/49) 6.39 0.011844 0.028163
GO:0005543 phospholipid binding 2.04% (1/49) 6.17 0.013805 0.031428
GO:0006325 chromatin organization 2.04% (1/49) 6.17 0.013805 0.031428
GO:0006357 regulation of transcription by RNA polymerase II 2.04% (1/49) 5.52 0.021609 0.047188
GO:0016592 mediator complex 2.04% (1/49) 5.52 0.021609 0.047188
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_11 0.026 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_150 0.04 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_71 0.025 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_182 0.031 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_233 0.015 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_235 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_321 0.019 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_353 0.031 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_367 0.037 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_394 0.031 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_7 0.015 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_54 0.054 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_22 0.029 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_77 0.017 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_109 0.028 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_134 0.048 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_18 0.017 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_59 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_107 0.028 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_109 0.021 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_134 0.018 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_158 0.022 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_170 0.055 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_222 0.033 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_417 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_6 0.04 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_13 0.037 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_66 0.047 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_230 0.015 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_337 0.024 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_85 0.026 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_165 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_191 0.022 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_194 0.05 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_219 0.016 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_2 0.026 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_5 0.019 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_9 0.019 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_11 0.023 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_20 0.019 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_35 0.022 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_46 0.019 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_61 0.026 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_84 0.023 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_40 0.056 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_10 0.019 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_127 0.063 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_152 0.023 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_24 0.028 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_58 0.024 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_70 0.071 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_94 0.04 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_33 0.03 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_72 0.032 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_117 0.019 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_128 0.015 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_131 0.035 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_156 0.081 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_42 0.017 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_102 0.046 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_31 0.017 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_161 0.085 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_138 0.016 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_174 0.044 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_49 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_73 0.024 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_108 0.022 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_110 0.018 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_120 0.023 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_159 0.021 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_1 0.033 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_33 0.054 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_83 0.024 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_22 0.029 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_62 0.082 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_12 0.027 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_118 0.023 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_119 0.019 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_130 0.099 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_110 0.096 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_27 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_51 0.019 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_98 0.021 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_176 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_200 0.023 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_379 0.019 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_47 0.02 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_108 0.089 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_7 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_10 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_87 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_93 0.02 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_123 0.023 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_149 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_153 0.027 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_155 0.028 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_206 0.043 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_10 0.037 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_13 0.037 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_28 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_45 0.016 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_67 0.03 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_105 0.022 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_145 0.055 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_170 0.028 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_61 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_47 0.015 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_135 0.083 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_141 0.022 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_144 0.037 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_42 0.028 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_49 0.044 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_47 0.053 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_61 0.049 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_99 0.021 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_51 0.076 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_100 0.018 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_106 0.021 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_5 0.017 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_62 0.092 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_46 0.022 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_132 0.095 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_180 0.024 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_4 0.043 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_49 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_121 0.017 OrthoFinder output from all 47 species Compare
Sequences (49) (download table)

InterPro Domains

GO Terms

Family Terms