Coexpression cluster: Cluster_1 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0000226 microtubule cytoskeleton organization 2.41% (2/83) 8.33 1.5e-05 0.001142
GO:0007051 spindle organization 2.41% (2/83) 8.33 1.5e-05 0.001142
GO:0051225 spindle assembly 2.41% (2/83) 8.33 1.5e-05 0.001142
GO:0007010 cytoskeleton organization 2.41% (2/83) 6.74 0.000159 0.008919
GO:1901576 organic substance biosynthetic process 8.43% (7/83) 2.44 0.000324 0.00908
GO:0070925 organelle assembly 2.41% (2/83) 6.56 0.000206 0.009227
GO:0022402 cell cycle process 2.41% (2/83) 6.4 0.000259 0.009653
GO:0140513 nuclear protein-containing complex 3.61% (3/83) 4.53 0.00031 0.009917
GO:0009058 biosynthetic process 8.43% (7/83) 2.29 0.000593 0.013273
GO:1901360 organic cyclic compound metabolic process 7.23% (6/83) 2.56 0.000562 0.013983
GO:0044249 cellular biosynthetic process 7.23% (6/83) 2.32 0.001317 0.016395
GO:1901362 organic cyclic compound biosynthetic process 4.82% (4/83) 3.28 0.000807 0.016432
GO:0022607 cellular component assembly 3.61% (3/83) 3.84 0.001247 0.016437
GO:0000469 cleavage involved in rRNA processing 1.2% (1/83) 9.65 0.001246 0.017439
GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly 1.2% (1/83) 9.65 0.001246 0.017439
GO:0070070 proton-transporting V-type ATPase complex assembly 1.2% (1/83) 9.65 0.001246 0.017439
GO:0090501 RNA phosphodiester bond hydrolysis 1.2% (1/83) 9.65 0.001246 0.017439
GO:0090305 nucleic acid phosphodiester bond hydrolysis 1.2% (1/83) 9.65 0.001246 0.017439
GO:0034641 cellular nitrogen compound metabolic process 7.23% (6/83) 2.22 0.001903 0.022439
GO:0070652 HAUS complex 1.2% (1/83) 8.65 0.00249 0.024248
GO:0004725 protein tyrosine phosphatase activity 1.2% (1/83) 8.65 0.00249 0.024248
GO:0006470 protein dephosphorylation 1.2% (1/83) 8.65 0.00249 0.024248
GO:0046483 heterocycle metabolic process 6.02% (5/83) 2.43 0.002442 0.027352
GO:0006996 organelle organization 2.41% (2/83) 4.58 0.003216 0.030015
GO:0003725 double-stranded RNA binding 1.2% (1/83) 8.06 0.003732 0.030965
GO:0031023 microtubule organizing center organization 1.2% (1/83) 8.06 0.003732 0.030965
GO:0070071 proton-transporting two-sector ATPase complex assembly 1.2% (1/83) 8.06 0.003732 0.030965
GO:1901566 organonitrogen compound biosynthetic process 4.82% (4/83) 2.63 0.004061 0.031366
GO:0007017 microtubule-based process 2.41% (2/83) 4.38 0.004222 0.031522
GO:0018130 heterocycle biosynthetic process 3.61% (3/83) 3.25 0.003974 0.031788
GO:0044271 cellular nitrogen compound biosynthetic process 4.82% (4/83) 2.58 0.004611 0.033316
GO:0000062 fatty-acyl-CoA binding 1.2% (1/83) 7.33 0.006213 0.040932
GO:1901567 fatty acid derivative binding 1.2% (1/83) 7.33 0.006213 0.040932
GO:0120227 acyl-CoA binding 1.2% (1/83) 7.33 0.006213 0.040932
GO:0090407 organophosphate biosynthetic process 2.41% (2/83) 4.01 0.007011 0.044871
GO:0006777 Mo-molybdopterin cofactor biosynthetic process 1.2% (1/83) 7.06 0.007451 0.045108
GO:0019720 Mo-molybdopterin cofactor metabolic process 1.2% (1/83) 7.06 0.007451 0.045108
GO:0030418 nicotianamine biosynthetic process 1.2% (1/83) 6.65 0.009922 0.04729
GO:0030417 nicotianamine metabolic process 1.2% (1/83) 6.65 0.009922 0.04729
GO:0072351 tricarboxylic acid biosynthetic process 1.2% (1/83) 6.65 0.009922 0.04729
GO:0005875 microtubule associated complex 1.2% (1/83) 6.65 0.009922 0.04729
GO:0072350 tricarboxylic acid metabolic process 1.2% (1/83) 6.65 0.009922 0.04729
GO:0030410 nicotianamine synthase activity 1.2% (1/83) 6.65 0.009922 0.04729
GO:0032991 protein-containing complex 4.82% (4/83) 2.31 0.00889 0.048571
GO:0005669 transcription factor TFIID complex 1.2% (1/83) 6.84 0.008687 0.048649
GO:0097526 spliceosomal tri-snRNP complex 1.2% (1/83) 6.84 0.008687 0.048649
GO:0046540 U4/U6 x U5 tri-snRNP complex 1.2% (1/83) 6.84 0.008687 0.048649
GO:0051189 prosthetic group metabolic process 1.2% (1/83) 6.48 0.011156 0.049978
GO:0043545 molybdopterin cofactor metabolic process 1.2% (1/83) 6.48 0.011156 0.049978
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_1 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_169 0.031 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_187 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_190 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_92 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_107 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_112 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_166 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_201 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_214 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_119 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_6 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_137 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_60 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_197 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_277 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_294 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_357 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_373 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_381 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_42 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_129 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_198 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_277 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_289 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_111 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_281 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_78 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_190 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_161 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_225 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_31 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_71 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_73 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_235 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_304 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_354 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_355 0.046 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_1 0.021 LandPlants Compare
Amborella trichopoda HCCA Cluster_15 0.017 LandPlants Compare
Amborella trichopoda HCCA Cluster_97 0.018 LandPlants Compare
Amborella trichopoda HCCA Cluster_119 0.015 LandPlants Compare
Amborella trichopoda HCCA Cluster_169 0.022 LandPlants Compare
Amborella trichopoda HCCA Cluster_183 0.015 LandPlants Compare
Amborella trichopoda HCCA Cluster_187 0.019 LandPlants Compare
Amborella trichopoda HCCA Cluster_190 0.024 LandPlants Compare
Amborella trichopoda HCCA Cluster_259 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_92 0.024 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_112 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_118 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_140 0.018 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_210 0.016 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_214 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_224 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_176 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_183 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_220 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_340 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_6 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_31 0.018 LandPlants Compare
Marchantia polymorpha HCCA Cluster_68 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_137 0.022 LandPlants Compare
Marchantia polymorpha HCCA Cluster_164 0.016 LandPlants Compare
Marchantia polymorpha HCCA Cluster_175 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_60 0.023 LandPlants Compare
Oryza sativa HCCA Cluster_171 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_277 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_288 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_291 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_294 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_357 0.019 LandPlants Compare
Oryza sativa HCCA Cluster_370 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_381 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_129 0.021 LandPlants Compare
Physcomitrella patens HCCA Cluster_198 0.018 LandPlants Compare
Physcomitrella patens HCCA Cluster_202 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_277 0.019 LandPlants Compare
Physcomitrella patens HCCA Cluster_289 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_301 0.016 LandPlants Compare
Picea abies HCCA Cluster_15 0.016 LandPlants Compare
Picea abies HCCA Cluster_111 0.017 LandPlants Compare
Picea abies HCCA Cluster_321 0.015 LandPlants Compare
Picea abies HCCA Cluster_534 0.015 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_78 0.021 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_119 0.018 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_190 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_116 0.017 LandPlants Compare
Solanum lycopersicum HCCA Cluster_161 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_225 0.023 LandPlants Compare
Solanum lycopersicum HCCA Cluster_270 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_274 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_283 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_31 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_74 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_159 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_193 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_234 0.016 LandPlants Compare
Zea mays HCCA Cluster_87 0.015 LandPlants Compare
Zea mays HCCA Cluster_101 0.016 LandPlants Compare
Zea mays HCCA Cluster_145 0.016 LandPlants Compare
Zea mays HCCA Cluster_149 0.014 LandPlants Compare
Zea mays HCCA Cluster_232 0.017 LandPlants Compare
Zea mays HCCA Cluster_235 0.021 LandPlants Compare
Zea mays HCCA Cluster_257 0.015 LandPlants Compare
Zea mays HCCA Cluster_267 0.016 LandPlants Compare
Zea mays HCCA Cluster_278 0.017 LandPlants Compare
Zea mays HCCA Cluster_354 0.023 LandPlants Compare
Zea mays HCCA Cluster_355 0.032 LandPlants Compare
Zea mays HCCA Cluster_356 0.014 LandPlants Compare
Amborella trichopoda HCCA Cluster_1 0.015 SeedPlants Compare
Amborella trichopoda HCCA Cluster_15 0.017 SeedPlants Compare
Amborella trichopoda HCCA Cluster_97 0.017 SeedPlants Compare
Amborella trichopoda HCCA Cluster_119 0.015 SeedPlants Compare
Amborella trichopoda HCCA Cluster_169 0.015 SeedPlants Compare
Amborella trichopoda HCCA Cluster_176 0.013 SeedPlants Compare
Amborella trichopoda HCCA Cluster_187 0.019 SeedPlants Compare
Amborella trichopoda HCCA Cluster_190 0.024 SeedPlants Compare
Amborella trichopoda HCCA Cluster_246 0.014 SeedPlants Compare
Amborella trichopoda HCCA Cluster_259 0.015 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_92 0.018 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_112 0.015 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_118 0.015 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_140 0.018 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_143 0.014 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_185 0.014 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_197 0.012 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_201 0.012 SeedPlants Compare
Gingko biloba HCCA Cluster_183 0.015 SeedPlants Compare
Gingko biloba HCCA Cluster_208 0.014 SeedPlants Compare
Gingko biloba HCCA Cluster_218 0.013 SeedPlants Compare
Gingko biloba HCCA Cluster_220 0.015 SeedPlants Compare
Gingko biloba HCCA Cluster_270 0.014 SeedPlants Compare
Gingko biloba HCCA Cluster_316 0.013 SeedPlants Compare
Gingko biloba HCCA Cluster_323 0.012 SeedPlants Compare
Gingko biloba HCCA Cluster_340 0.015 SeedPlants Compare
Oryza sativa HCCA Cluster_10 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_50 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_97 0.013 SeedPlants Compare
Oryza sativa HCCA Cluster_171 0.015 SeedPlants Compare
Oryza sativa HCCA Cluster_197 0.013 SeedPlants Compare
Oryza sativa HCCA Cluster_272 0.014 SeedPlants Compare
Oryza sativa HCCA Cluster_277 0.016 SeedPlants Compare
Oryza sativa HCCA Cluster_288 0.014 SeedPlants Compare
Oryza sativa HCCA Cluster_293 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_294 0.016 SeedPlants Compare
Oryza sativa HCCA Cluster_308 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_342 0.013 SeedPlants Compare
Oryza sativa HCCA Cluster_351 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_357 0.013 SeedPlants Compare
Oryza sativa HCCA Cluster_370 0.015 SeedPlants Compare
Oryza sativa HCCA Cluster_381 0.016 SeedPlants Compare
Picea abies HCCA Cluster_222 0.012 SeedPlants Compare
Picea abies HCCA Cluster_321 0.015 SeedPlants Compare
Picea abies HCCA Cluster_376 0.013 SeedPlants Compare
Picea abies HCCA Cluster_488 0.013 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_9 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_116 0.017 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_161 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_192 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_225 0.023 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_236 0.012 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_270 0.016 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_274 0.015 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_283 0.015 SeedPlants Compare
Vitis vinifera HCCA Cluster_71 0.013 SeedPlants Compare
Vitis vinifera HCCA Cluster_74 0.015 SeedPlants Compare
Vitis vinifera HCCA Cluster_190 0.014 SeedPlants Compare
Vitis vinifera HCCA Cluster_234 0.016 SeedPlants Compare
Vitis vinifera HCCA Cluster_239 0.014 SeedPlants Compare
Zea mays HCCA Cluster_87 0.015 SeedPlants Compare
Zea mays HCCA Cluster_90 0.014 SeedPlants Compare
Zea mays HCCA Cluster_145 0.016 SeedPlants Compare
Zea mays HCCA Cluster_149 0.015 SeedPlants Compare
Zea mays HCCA Cluster_263 0.013 SeedPlants Compare
Zea mays HCCA Cluster_267 0.016 SeedPlants Compare
Zea mays HCCA Cluster_278 0.017 SeedPlants Compare
Zea mays HCCA Cluster_304 0.013 SeedPlants Compare
Zea mays HCCA Cluster_351 0.014 SeedPlants Compare
Zea mays HCCA Cluster_354 0.023 SeedPlants Compare
Zea mays HCCA Cluster_355 0.039 SeedPlants Compare
Sequences (83) (download table)

InterPro Domains

GO Terms

Family Terms