Coexpression cluster: Cluster_14 (HCCA cluster)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006396 RNA processing 5.94% (6/101) 3.49 1.7e-05 0.001919
GO:0016072 rRNA metabolic process 2.97% (3/101) 5.49 4e-05 0.002311
GO:0006364 rRNA processing 2.97% (3/101) 5.49 4e-05 0.002311
GO:0016070 RNA metabolic process 7.92% (8/101) 2.86 1.6e-05 0.003633
GO:0032040 small-subunit processome 1.98% (2/101) 6.85 0.000124 0.004758
GO:0090304 nucleic acid metabolic process 7.92% (8/101) 2.47 0.000106 0.004909
GO:0034470 ncRNA processing 3.96% (4/101) 3.86 0.000172 0.005684
GO:0030684 preribosome 1.98% (2/101) 6.43 0.00023 0.006637
GO:0034660 ncRNA metabolic process 3.96% (4/101) 3.37 0.000637 0.01227
GO:0042254 ribosome biogenesis 1.98% (2/101) 5.73 0.000634 0.013319
GO:0022613 ribonucleoprotein complex biogenesis 1.98% (2/101) 5.73 0.000634 0.013319
GO:0006139 nucleobase-containing compound metabolic process 7.92% (8/101) 2.09 0.00061 0.015657
GO:0006725 cellular aromatic compound metabolic process 7.92% (8/101) 1.96 0.001108 0.017056
GO:0044085 cellular component biogenesis 1.98% (2/101) 5.43 0.00097 0.017241
GO:0046483 heterocycle metabolic process 7.92% (8/101) 1.96 0.001069 0.01763
GO:0005488 binding 32.67% (33/101) 0.73 0.001366 0.018562
GO:1901360 organic cyclic compound metabolic process 7.92% (8/101) 1.92 0.001297 0.018732
GO:0016973 poly(A)+ mRNA export from nucleus 0.99% (1/101) 8.43 0.002896 0.029083
GO:0031417 NatC complex 0.99% (1/101) 8.43 0.002896 0.029083
GO:0031414 N-terminal protein acetyltransferase complex 0.99% (1/101) 8.43 0.002896 0.029083
GO:0018206 peptidyl-methionine modification 0.99% (1/101) 8.43 0.002896 0.029083
GO:0017196 N-terminal peptidyl-methionine acetylation 0.99% (1/101) 8.43 0.002896 0.029083
GO:0006474 N-terminal protein amino acid acetylation 0.99% (1/101) 8.43 0.002896 0.029083
GO:0003676 nucleic acid binding 11.88% (12/101) 1.29 0.003562 0.032913
GO:0044428 nuclear part 2.97% (3/101) 3.32 0.003472 0.033423
GO:0009451 RNA modification 1.98% (2/101) 4.39 0.004134 0.036733
GO:0008270 zinc ion binding 4.95% (5/101) 2.18 0.005155 0.044103
GO:0005685 U1 snRNP 0.99% (1/101) 7.43 0.005783 0.04453
GO:0006376 mRNA splice site selection 0.99% (1/101) 7.43 0.005783 0.04453
GO:0006397 mRNA processing 1.98% (2/101) 4.15 0.005737 0.047332
GO:0050657 nucleic acid transport 0.99% (1/101) 6.85 0.008662 0.048805
GO:0006406 mRNA export from nucleus 0.99% (1/101) 6.85 0.008662 0.048805
GO:0051028 mRNA transport 0.99% (1/101) 6.85 0.008662 0.048805
GO:0050658 RNA transport 0.99% (1/101) 6.85 0.008662 0.048805
GO:0051168 nuclear export 0.99% (1/101) 6.85 0.008662 0.048805
GO:0051236 establishment of RNA localization 0.99% (1/101) 6.85 0.008662 0.048805
GO:0043543 protein acylation 0.99% (1/101) 6.85 0.008662 0.048805
GO:0006473 protein acetylation 0.99% (1/101) 6.85 0.008662 0.048805
GO:0031365 N-terminal protein amino acid modification 0.99% (1/101) 6.85 0.008662 0.048805
GO:0006405 RNA export from nucleus 0.99% (1/101) 6.85 0.008662 0.048805
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_21 0.059 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_28 0.073 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_39 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_48 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_61 0.061 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_92 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_101 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_107 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.038 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.023 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.043 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_224 0.027 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_229 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_244 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_269 0.029 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.06 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_10 0.09 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_69 0.031 Gene family Compare
Oryza sativa HCCA cluster Cluster_45 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.103 Gene family Compare
Oryza sativa HCCA cluster Cluster_148 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_174 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_182 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_276 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_284 0.032 Gene family Compare
Oryza sativa HCCA cluster Cluster_311 0.029 Gene family Compare
Oryza sativa HCCA cluster Cluster_335 0.035 Gene family Compare
Picea abies HCCA cluster Cluster_36 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_64 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_69 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_73 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_114 0.029 Gene family Compare
Picea abies HCCA cluster Cluster_222 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_229 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_258 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_339 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_343 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_434 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_468 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_41 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_55 0.025 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_66 0.042 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_74 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_104 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_140 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_165 0.027 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_197 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_141 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.041 Gene family Compare
Vitis vinifera HCCA cluster Cluster_46 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_58 0.023 Gene family Compare
Vitis vinifera HCCA cluster Cluster_82 0.085 Gene family Compare
Vitis vinifera HCCA cluster Cluster_85 0.072 Gene family Compare
Vitis vinifera HCCA cluster Cluster_149 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_171 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_195 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.029 Gene family Compare
Vitis vinifera HCCA cluster Cluster_226 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_101 0.03 Gene family Compare
Zea mays HCCA cluster Cluster_120 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.035 Gene family Compare
Zea mays HCCA cluster Cluster_173 0.029 Gene family Compare
Zea mays HCCA cluster Cluster_185 0.029 Gene family Compare
Zea mays HCCA cluster Cluster_221 0.048 Gene family Compare
Zea mays HCCA cluster Cluster_259 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_271 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_272 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_307 0.035 Gene family Compare
Zea mays HCCA cluster Cluster_326 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_328 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_330 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_331 0.067 Gene family Compare
Zea mays HCCA cluster Cluster_341 0.049 Gene family Compare
Zea mays HCCA cluster Cluster_352 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_354 0.019 Gene family Compare
Sequences (101) (download table)

InterPro Domains

GO Terms

Family Terms