Coexpression cluster: Cluster_309 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044451 nucleoplasm part 8.47% (5/59) 6.07 0.0 3e-06
GO:0044428 nuclear part 10.17% (6/59) 5.09 0.0 3e-06
GO:0044422 organelle part 13.56% (8/59) 3.75 0.0 1e-05
GO:0044446 intracellular organelle part 13.56% (8/59) 3.75 0.0 1e-05
GO:0016043 cellular component organization 8.47% (5/59) 3.51 8e-05 0.004518
GO:0071840 cellular component organization or biogenesis 8.47% (5/59) 3.42 0.000106 0.004983
GO:0016570 histone modification 3.39% (2/59) 6.4 0.000253 0.008938
GO:0016569 covalent chromatin modification 3.39% (2/59) 6.4 0.000253 0.008938
GO:0044424 intracellular part 15.25% (9/59) 2.01 0.000352 0.011072
GO:0032991 protein-containing complex 11.86% (7/59) 2.29 0.000545 0.012862
GO:0044464 cell part 15.25% (9/59) 1.93 0.00052 0.013388
GO:0016592 mediator complex 3.39% (2/59) 5.75 0.000636 0.013841
GO:0003676 nucleic acid binding 16.95% (10/59) 1.81 0.000497 0.014071
GO:0031228 intrinsic component of Golgi membrane 1.69% (1/59) 9.21 0.001692 0.025195
GO:0030173 integral component of Golgi membrane 1.69% (1/59) 9.21 0.001692 0.025195
GO:0032774 RNA biosynthetic process 5.08% (3/59) 3.83 0.001262 0.025505
GO:0090304 nucleic acid metabolic process 8.47% (5/59) 2.56 0.001572 0.026166
GO:0009987 cellular process 23.73% (14/59) 1.26 0.001539 0.027212
GO:0003712 transcription coregulator activity 3.39% (2/59) 5.12 0.001524 0.028754
GO:0008290 F-actin capping protein complex 1.69% (1/59) 7.62 0.005066 0.034137
GO:0030834 regulation of actin filament depolymerization 1.69% (1/59) 7.62 0.005066 0.034137
GO:0043242 negative regulation of protein complex disassembly 1.69% (1/59) 7.62 0.005066 0.034137
GO:0031333 negative regulation of protein complex assembly 1.69% (1/59) 7.62 0.005066 0.034137
GO:0098657 import into cell 1.69% (1/59) 7.62 0.005066 0.034137
GO:0051016 barbed-end actin filament capping 1.69% (1/59) 7.62 0.005066 0.034137
GO:0008023 transcription elongation factor complex 1.69% (1/59) 7.62 0.005066 0.034137
GO:1902904 negative regulation of supramolecular fiber organization 1.69% (1/59) 7.62 0.005066 0.034137
GO:1901880 negative regulation of protein depolymerization 1.69% (1/59) 7.62 0.005066 0.034137
GO:1901879 regulation of protein depolymerization 1.69% (1/59) 7.62 0.005066 0.034137
GO:0030837 negative regulation of actin filament polymerization 1.69% (1/59) 7.62 0.005066 0.034137
GO:0032272 negative regulation of protein polymerization 1.69% (1/59) 7.62 0.005066 0.034137
GO:0051693 actin filament capping 1.69% (1/59) 7.62 0.005066 0.034137
GO:0030835 negative regulation of actin filament depolymerization 1.69% (1/59) 7.62 0.005066 0.034137
GO:0006897 endocytosis 1.69% (1/59) 7.62 0.005066 0.034137
GO:0051494 negative regulation of cytoskeleton organization 1.69% (1/59) 7.62 0.005066 0.034137
GO:0097159 organic cyclic compound binding 23.73% (14/59) 1.05 0.005851 0.036797
GO:1901363 heterocyclic compound binding 23.73% (14/59) 1.05 0.005851 0.036797
GO:0005575 cellular_component 18.64% (11/59) 1.25 0.005593 0.036813
GO:0008079 translation termination factor activity 1.69% (1/59) 7.21 0.006749 0.037452
GO:0003747 translation release factor activity 1.69% (1/59) 7.21 0.006749 0.037452
GO:0005669 transcription factor TFIID complex 1.69% (1/59) 7.21 0.006749 0.037452
GO:0010639 negative regulation of organelle organization 1.69% (1/59) 7.21 0.006749 0.037452
GO:0051129 negative regulation of cellular component organization 1.69% (1/59) 7.21 0.006749 0.037452
GO:0046483 heterocycle metabolic process 8.47% (5/59) 2.06 0.006899 0.037547
GO:0006725 cellular aromatic compound metabolic process 8.47% (5/59) 2.05 0.007061 0.037701
GO:0034654 nucleobase-containing compound biosynthetic process 5.08% (3/59) 3.0 0.006284 0.038663
GO:0008150 biological_process 35.59% (21/59) 0.75 0.007432 0.038947
GO:0006891 intra-Golgi vesicle-mediated transport 1.69% (1/59) 8.21 0.00338 0.039859
GO:0016593 Cdc73/Paf1 complex 1.69% (1/59) 8.21 0.00338 0.039859
GO:0006368 transcription elongation from RNA polymerase II promoter 1.69% (1/59) 8.21 0.00338 0.039859
GO:0006354 DNA-templated transcription, elongation 1.69% (1/59) 8.21 0.00338 0.039859
GO:1901360 organic cyclic compound metabolic process 8.47% (5/59) 2.02 0.007821 0.040241
GO:0070461 SAGA-type complex 1.69% (1/59) 6.89 0.00843 0.041853
GO:0043933 protein-containing complex subunit organization 3.39% (2/59) 3.87 0.008365 0.042274
GO:0006325 chromatin organization 3.39% (2/59) 4.62 0.003018 0.042708
GO:0090066 regulation of anatomical structure size 1.69% (1/59) 6.21 0.013454 0.043764
GO:0051493 regulation of cytoskeleton organization 1.69% (1/59) 6.21 0.013454 0.043764
GO:0043624 cellular protein complex disassembly 1.69% (1/59) 6.21 0.013454 0.043764
GO:0110053 regulation of actin filament organization 1.69% (1/59) 6.21 0.013454 0.043764
GO:0017056 structural constituent of nuclear pore 1.69% (1/59) 6.21 0.013454 0.043764
GO:1902903 regulation of supramolecular fiber organization 1.69% (1/59) 6.21 0.013454 0.043764
GO:0006415 translational termination 1.69% (1/59) 6.21 0.013454 0.043764
GO:0022411 cellular component disassembly 1.69% (1/59) 6.21 0.013454 0.043764
GO:0032984 protein-containing complex disassembly 1.69% (1/59) 6.21 0.013454 0.043764
GO:0032535 regulation of cellular component size 1.69% (1/59) 6.21 0.013454 0.043764
GO:0031248 protein acetyltransferase complex 1.69% (1/59) 6.21 0.013454 0.043764
GO:0030832 regulation of actin filament length 1.69% (1/59) 6.21 0.013454 0.043764
GO:1902493 acetyltransferase complex 1.69% (1/59) 6.21 0.013454 0.043764
GO:0032970 regulation of actin filament-based process 1.69% (1/59) 6.21 0.013454 0.043764
GO:0043244 regulation of protein complex disassembly 1.69% (1/59) 6.21 0.013454 0.043764
GO:0008064 regulation of actin polymerization or depolymerization 1.69% (1/59) 6.21 0.013454 0.043764
GO:0051260 protein homooligomerization 1.69% (1/59) 6.21 0.013454 0.043764
GO:0051259 protein complex oligomerization 1.69% (1/59) 6.21 0.013454 0.043764
GO:0043254 regulation of protein complex assembly 1.69% (1/59) 6.21 0.013454 0.043764
GO:0032956 regulation of actin cytoskeleton organization 1.69% (1/59) 6.21 0.013454 0.043764
GO:0032271 regulation of protein polymerization 1.69% (1/59) 6.21 0.013454 0.043764
GO:0030833 regulation of actin filament polymerization 1.69% (1/59) 6.21 0.013454 0.043764
GO:0016070 RNA metabolic process 6.78% (4/59) 2.63 0.003975 0.044994
GO:0034968 histone lysine methylation 1.69% (1/59) 6.04 0.015123 0.04602
GO:0090575 RNA polymerase II transcription factor complex 1.69% (1/59) 6.04 0.015123 0.04602
GO:0044087 regulation of cellular component biogenesis 1.69% (1/59) 6.04 0.015123 0.04602
GO:0018022 peptidyl-lysine methylation 1.69% (1/59) 6.04 0.015123 0.04602
GO:0016571 histone methylation 1.69% (1/59) 6.04 0.015123 0.04602
GO:0044798 nuclear transcription factor complex 1.69% (1/59) 6.04 0.015123 0.04602
GO:0051649 establishment of localization in cell 3.39% (2/59) 3.37 0.016049 0.047808
GO:0046907 intracellular transport 3.39% (2/59) 3.37 0.016049 0.047808
GO:0018130 heterocycle biosynthetic process 5.08% (3/59) 2.74 0.010412 0.04911
GO:0019438 aromatic compound biosynthetic process 5.08% (3/59) 2.74 0.010412 0.04911
GO:0044237 cellular metabolic process 16.95% (10/59) 1.1 0.016873 0.049226
GO:0031683 G-protein beta/gamma-subunit complex binding 1.69% (1/59) 6.62 0.010107 0.049316
GO:0033043 regulation of organelle organization 1.69% (1/59) 5.89 0.01679 0.049494
GO:0043170 macromolecule metabolic process 15.25% (9/59) 1.17 0.017243 0.049794
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_9 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_32 0.027 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_47 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_48 0.039 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_59 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_70 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_93 0.06 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_103 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_117 0.031 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_122 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_126 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_139 0.023 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_152 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_176 0.027 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_185 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_187 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_197 0.032 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_205 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_228 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_229 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_234 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_235 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_240 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_244 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_248 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_262 0.033 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_48 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_197 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_199 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_99 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_120 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_127 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_156 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_2 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_26 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_173 0.025 Gene family Compare
Oryza sativa HCCA cluster Cluster_175 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_189 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_234 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_248 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_258 0.026 Gene family Compare
Oryza sativa HCCA cluster Cluster_273 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_276 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_289 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_297 0.034 Gene family Compare
Oryza sativa HCCA cluster Cluster_311 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_317 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_68 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_69 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_218 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_229 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_247 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_374 0.035 Gene family Compare
Picea abies HCCA cluster Cluster_388 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_390 0.027 Gene family Compare
Picea abies HCCA cluster Cluster_397 0.031 Gene family Compare
Picea abies HCCA cluster Cluster_415 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_439 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_82 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_91 0.021 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_120 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_131 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_133 0.02 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_158 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_192 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_45 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_109 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_129 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_140 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_217 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_218 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_228 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_275 0.028 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_289 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_290 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_302 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_308 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_10 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_31 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_70 0.032 Gene family Compare
Vitis vinifera HCCA cluster Cluster_72 0.026 Gene family Compare
Vitis vinifera HCCA cluster Cluster_103 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_127 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_128 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_165 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_170 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_189 0.029 Gene family Compare
Vitis vinifera HCCA cluster Cluster_204 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_210 0.035 Gene family Compare
Vitis vinifera HCCA cluster Cluster_213 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_216 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_224 0.028 Gene family Compare
Vitis vinifera HCCA cluster Cluster_226 0.027 Gene family Compare
Vitis vinifera HCCA cluster Cluster_228 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_230 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_232 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_234 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_235 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_8 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_16 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_23 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_38 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_99 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_110 0.047 Gene family Compare
Zea mays HCCA cluster Cluster_160 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_162 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_166 0.028 Gene family Compare
Zea mays HCCA cluster Cluster_170 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_172 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_178 0.036 Gene family Compare
Zea mays HCCA cluster Cluster_186 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_191 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_200 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_224 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_231 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_266 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_270 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_271 0.031 Gene family Compare
Zea mays HCCA cluster Cluster_281 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_286 0.025 Gene family Compare
Zea mays HCCA cluster Cluster_307 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_322 0.034 Gene family Compare
Zea mays HCCA cluster Cluster_338 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_341 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_355 0.016 Gene family Compare
Sequences (59) (download table)

InterPro Domains

GO Terms

Family Terms