Coexpression cluster: Cluster_176 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0033554 cellular response to stress 7.14% (4/56) 5.05 7e-06 0.000224
GO:0051716 cellular response to stimulus 7.14% (4/56) 5.05 7e-06 0.000224
GO:0006974 cellular response to DNA damage stimulus 7.14% (4/56) 5.05 7e-06 0.000224
GO:0006259 DNA metabolic process 8.93% (5/56) 4.69 2e-06 0.000258
GO:0006281 DNA repair 7.14% (4/56) 5.17 5e-06 0.0004
GO:0090304 nucleic acid metabolic process 12.5% (7/56) 3.12 1.5e-05 0.000422
GO:0008094 DNA-dependent ATPase activity 3.57% (2/56) 7.7 3.8e-05 0.000908
GO:0140097 catalytic activity, acting on DNA 5.36% (3/56) 5.28 6.4e-05 0.001353
GO:0006139 nucleobase-containing compound metabolic process 12.5% (7/56) 2.75 7.9e-05 0.001468
GO:0016458 gene silencing 3.57% (2/56) 6.7 0.000165 0.001852
GO:0031047 gene silencing by RNA 3.57% (2/56) 6.7 0.000165 0.001852
GO:0006950 response to stress 8.93% (5/56) 3.4 0.000112 0.001886
GO:0006725 cellular aromatic compound metabolic process 12.5% (7/56) 2.61 0.00014 0.001954
GO:0046483 heterocycle metabolic process 12.5% (7/56) 2.62 0.000135 0.002059
GO:1901360 organic cyclic compound metabolic process 12.5% (7/56) 2.58 0.000163 0.002103
GO:0010629 negative regulation of gene expression 3.57% (2/56) 5.96 0.000472 0.004958
GO:0050896 response to stimulus 8.93% (5/56) 2.87 0.000601 0.005318
GO:0010605 negative regulation of macromolecule metabolic process 3.57% (2/56) 5.82 0.000573 0.005347
GO:0009892 negative regulation of metabolic process 3.57% (2/56) 5.82 0.000573 0.005347
GO:0051276 chromosome organization 3.57% (2/56) 5.38 0.00107 0.008988
GO:0048519 negative regulation of biological process 3.57% (2/56) 5.07 0.001626 0.009759
GO:0010468 regulation of gene expression 10.71% (6/56) 2.31 0.001279 0.009767
GO:0034641 cellular nitrogen compound metabolic process 12.5% (7/56) 2.09 0.001241 0.009926
GO:0043140 ATP-dependent 3'-5' DNA helicase activity 1.79% (1/56) 9.28 0.001606 0.00999
GO:0043138 3'-5' DNA helicase activity 1.79% (1/56) 9.28 0.001606 0.00999
GO:0003676 nucleic acid binding 16.07% (9/56) 1.73 0.001391 0.010162
GO:0060255 regulation of macromolecule metabolic process 10.71% (6/56) 2.28 0.001452 0.010165
GO:0019222 regulation of metabolic process 10.71% (6/56) 2.26 0.00154 0.010349
GO:0042623 ATPase activity, coupled 3.57% (2/56) 4.67 0.002837 0.016433
GO:0004003 ATP-dependent DNA helicase activity 1.79% (1/56) 8.28 0.003209 0.017968
GO:0006996 organelle organization 3.57% (2/56) 4.4 0.004085 0.022138
GO:0016886 ligase activity, forming phosphoric ester bonds 1.79% (1/56) 7.7 0.004809 0.023762
GO:0003910 DNA ligase (ATP) activity 1.79% (1/56) 7.7 0.004809 0.023762
GO:0003909 DNA ligase activity 1.79% (1/56) 7.7 0.004809 0.023762
GO:0061505 DNA topoisomerase II activity 1.79% (1/56) 7.28 0.006407 0.029899
GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity 1.79% (1/56) 7.28 0.006407 0.029899
GO:0050789 regulation of biological process 10.71% (6/56) 1.82 0.006951 0.031563
GO:0065007 biological regulation 10.71% (6/56) 1.77 0.008096 0.035791
GO:0008026 ATP-dependent helicase activity 1.79% (1/56) 6.7 0.009595 0.040301
GO:0070035 purine NTP-dependent helicase activity 1.79% (1/56) 6.7 0.009595 0.040301
GO:0006310 DNA recombination 1.79% (1/56) 6.28 0.012774 0.048772
GO:0003684 damaged DNA binding 1.79% (1/56) 6.28 0.012774 0.048772
GO:0006265 DNA topological change 1.79% (1/56) 6.28 0.012774 0.048772
GO:0003916 DNA topoisomerase activity 1.79% (1/56) 6.28 0.012774 0.048772
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_21 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_25 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_42 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_47 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_58 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_66 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_90 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_106 0.028 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_110 0.044 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_127 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_136 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_157 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_173 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_187 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_196 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_197 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_200 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_202 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_224 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_244 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_260 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_26 0.019 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_126 0.018 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_130 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_2 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_26 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_123 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_161 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_182 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_205 0.026 Gene family Compare
Oryza sativa HCCA cluster Cluster_263 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_311 0.023 Gene family Compare
Picea abies HCCA cluster Cluster_19 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_69 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_201 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_343 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_390 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_395 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_407 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_439 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_453 0.027 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_5 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_12 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_28 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_37 0.022 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_45 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_101 0.028 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_198 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_231 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_233 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_261 0.03 Gene family Compare
Vitis vinifera HCCA cluster Cluster_46 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_71 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_82 0.03 Gene family Compare
Vitis vinifera HCCA cluster Cluster_172 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_179 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_182 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_204 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_224 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_228 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_15 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_86 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_172 0.029 Gene family Compare
Zea mays HCCA cluster Cluster_228 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_272 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_289 0.019 Gene family Compare
Sequences (56) (download table)

InterPro Domains

GO Terms

Family Terms