Coexpression cluster: Cluster_302 (HCCA cluster)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006725 cellular aromatic compound metabolic process 10.45% (7/67) 2.36 0.000431 0.0072
GO:0003690 double-stranded DNA binding 4.48% (3/67) 5.36 5.4e-05 0.007271
GO:0140097 catalytic activity, acting on DNA 4.48% (3/67) 5.02 0.00011 0.007352
GO:0005488 binding 41.79% (28/67) 1.09 2.8e-05 0.007355
GO:1901360 organic cyclic compound metabolic process 10.45% (7/67) 2.32 0.000501 0.007424
GO:0046483 heterocycle metabolic process 10.45% (7/67) 2.36 0.000417 0.007427
GO:0006643 membrane lipid metabolic process 2.99% (2/67) 5.94 0.000485 0.007621
GO:0090304 nucleic acid metabolic process 8.96% (6/67) 2.64 0.000401 0.007652
GO:0006259 DNA metabolic process 5.97% (4/67) 4.11 8.9e-05 0.007939
GO:1901363 heterocyclic compound binding 26.87% (18/67) 1.23 0.000401 0.00824
GO:0097159 organic cyclic compound binding 26.87% (18/67) 1.23 0.000401 0.00824
GO:0003674 molecular_function 56.72% (38/67) 0.72 0.00016 0.008535
GO:0009987 cellular process 23.88% (16/67) 1.27 0.000681 0.009086
GO:0009247 glycolipid biosynthetic process 2.99% (2/67) 6.12 0.000376 0.009116
GO:1903509 liposaccharide metabolic process 2.99% (2/67) 6.12 0.000376 0.009116
GO:0006664 glycolipid metabolic process 2.99% (2/67) 6.12 0.000376 0.009116
GO:0046467 membrane lipid biosynthetic process 2.99% (2/67) 6.12 0.000376 0.009116
GO:0044237 cellular metabolic process 20.9% (14/67) 1.4 0.000668 0.009383
GO:1901137 carbohydrate derivative biosynthetic process 4.48% (3/67) 4.05 0.000801 0.009726
GO:0006364 rRNA processing 2.99% (2/67) 5.5 0.000896 0.009968
GO:0016072 rRNA metabolic process 2.99% (2/67) 5.5 0.000896 0.009968
GO:0017111 nucleoside-triphosphatase activity 7.46% (5/67) 2.79 0.000801 0.010185
GO:0016817 hydrolase activity, acting on acid anhydrides 7.46% (5/67) 2.69 0.001078 0.01028
GO:0036094 small molecule binding 16.42% (11/67) 1.54 0.001246 0.010396
GO:0008654 phospholipid biosynthetic process 2.99% (2/67) 5.38 0.00106 0.01048
GO:0016787 hydrolase activity 14.93% (10/67) 1.65 0.001226 0.010557
GO:0008144 drug binding 13.43% (9/67) 1.77 0.001187 0.010565
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 7.46% (5/67) 2.71 0.001031 0.010592
GO:0006807 nitrogen compound metabolic process 19.4% (13/67) 1.39 0.001153 0.010616
GO:0016462 pyrophosphatase activity 7.46% (5/67) 2.71 0.00102 0.010893
GO:0017076 purine nucleotide binding 14.93% (10/67) 1.63 0.001359 0.010993
GO:0006139 nucleobase-containing compound metabolic process 10.45% (7/67) 2.49 0.000247 0.011005
GO:0090407 organophosphate biosynthetic process 4.48% (3/67) 3.73 0.001544 0.012128
GO:0043170 macromolecule metabolic process 17.91% (12/67) 1.4 0.001669 0.012735
GO:0003676 nucleic acid binding 16.42% (11/67) 1.76 0.000352 0.013423
GO:0035639 purine ribonucleoside triphosphate binding 13.43% (9/67) 1.68 0.001849 0.013714
GO:0008915 lipid-A-disaccharide synthase activity 1.49% (1/67) 9.02 0.001921 0.013862
GO:0004386 helicase activity 2.99% (2/67) 4.85 0.002195 0.015426
GO:1901265 nucleoside phosphate binding 14.93% (10/67) 1.49 0.002741 0.017424
GO:0000166 nucleotide binding 14.93% (10/67) 1.49 0.002741 0.017424
GO:0044238 primary metabolic process 20.9% (14/67) 1.2 0.002563 0.017549
GO:0005524 ATP binding 11.94% (8/67) 1.73 0.002732 0.018235
GO:0004175 endopeptidase activity 4.48% (3/67) 3.37 0.003111 0.019318
GO:0034641 cellular nitrogen compound metabolic process 10.45% (7/67) 1.83 0.003523 0.020901
GO:1901135 carbohydrate derivative metabolic process 4.48% (3/67) 3.31 0.003471 0.021063
GO:0043168 anion binding 14.93% (10/67) 1.43 0.00368 0.02136
GO:0071704 organic substance metabolic process 20.9% (14/67) 1.13 0.003881 0.021589
GO:0006189 'de novo' IMP biosynthetic process 1.49% (1/67) 8.02 0.003838 0.021804
GO:0006796 phosphate-containing compound metabolic process 10.45% (7/67) 1.78 0.00425 0.022697
GO:0006793 phosphorus metabolic process 10.45% (7/67) 1.78 0.00425 0.022697
GO:0032555 purine ribonucleotide binding 13.43% (9/67) 1.48 0.00463 0.022894
GO:0070011 peptidase activity, acting on L-amino acid peptides 5.97% (4/67) 2.6 0.004373 0.022897
GO:0006644 phospholipid metabolic process 2.99% (2/67) 4.32 0.00453 0.023262
GO:0006188 IMP biosynthetic process 1.49% (1/67) 7.44 0.005752 0.023269
GO:0016886 ligase activity, forming phosphoric ester bonds 1.49% (1/67) 7.44 0.005752 0.023269
GO:0003909 DNA ligase activity 1.49% (1/67) 7.44 0.005752 0.023269
GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity 1.49% (1/67) 7.44 0.005752 0.023269
GO:0046040 IMP metabolic process 1.49% (1/67) 7.44 0.005752 0.023269
GO:0003910 DNA ligase (ATP) activity 1.49% (1/67) 7.44 0.005752 0.023269
GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity 1.49% (1/67) 7.44 0.005752 0.023269
GO:0019637 organophosphate metabolic process 4.48% (3/67) 3.17 0.004626 0.023304
GO:0032553 ribonucleotide binding 13.43% (9/67) 1.47 0.004868 0.023631
GO:0043167 ion binding 19.4% (13/67) 1.13 0.005413 0.024497
GO:0097367 carbohydrate derivative binding 13.43% (9/67) 1.46 0.005173 0.024664
GO:0140096 catalytic activity, acting on a protein 11.94% (8/67) 1.57 0.005388 0.024802
GO:0008233 peptidase activity 5.97% (4/67) 2.51 0.005385 0.025226
GO:0061505 DNA topoisomerase II activity 1.49% (1/67) 7.02 0.007662 0.026568
GO:0044093 positive regulation of molecular function 1.49% (1/67) 7.02 0.007662 0.026568
GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity 1.49% (1/67) 7.02 0.007662 0.026568
GO:0043085 positive regulation of catalytic activity 1.49% (1/67) 7.02 0.007662 0.026568
GO:0046493 lipid A metabolic process 1.49% (1/67) 7.02 0.007662 0.026568
GO:1901269 lipooligosaccharide metabolic process 1.49% (1/67) 7.02 0.007662 0.026568
GO:1901271 lipooligosaccharide biosynthetic process 1.49% (1/67) 7.02 0.007662 0.026568
GO:0009245 lipid A biosynthetic process 1.49% (1/67) 7.02 0.007662 0.026568
GO:0006281 DNA repair 2.99% (2/67) 3.92 0.007849 0.026868
GO:0032559 adenyl ribonucleotide binding 11.94% (8/67) 1.5 0.007048 0.028085
GO:0030554 adenyl nucleotide binding 11.94% (8/67) 1.5 0.007159 0.028111
GO:0044260 cellular macromolecule metabolic process 13.43% (9/67) 1.38 0.007332 0.028371
GO:0051716 cellular response to stimulus 2.99% (2/67) 3.8 0.009216 0.030379
GO:0033554 cellular response to stress 2.99% (2/67) 3.8 0.009216 0.030379
GO:0006974 cellular response to DNA damage stimulus 2.99% (2/67) 3.8 0.009216 0.030379
GO:0003677 DNA binding 8.96% (6/67) 1.7 0.010431 0.033966
GO:0031683 G-protein beta/gamma-subunit complex binding 1.49% (1/67) 6.44 0.011471 0.035614
GO:0008094 DNA-dependent ATPase activity 1.49% (1/67) 6.44 0.011471 0.035614
GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 1.49% (1/67) 6.44 0.011471 0.035614
GO:0016021 integral component of membrane 7.46% (5/67) 1.89 0.011409 0.0367
GO:0031224 intrinsic component of membrane 7.46% (5/67) 1.85 0.012613 0.038709
GO:0034470 ncRNA processing 2.99% (2/67) 3.45 0.014469 0.043899
GO:0006265 DNA topological change 1.49% (1/67) 6.02 0.015266 0.044305
GO:0003916 DNA topoisomerase activity 1.49% (1/67) 6.02 0.015266 0.044305
GO:0006310 DNA recombination 1.49% (1/67) 6.02 0.015266 0.044305
GO:0004252 serine-type endopeptidase activity 2.99% (2/67) 3.42 0.01505 0.045151
GO:0006661 phosphatidylinositol biosynthetic process 1.49% (1/67) 5.85 0.017158 0.046275
GO:0006505 GPI anchor metabolic process 1.49% (1/67) 5.85 0.017158 0.046275
GO:0006497 protein lipidation 1.49% (1/67) 5.85 0.017158 0.046275
GO:0016485 protein processing 1.49% (1/67) 5.85 0.017158 0.046275
GO:0071103 DNA conformation change 1.49% (1/67) 5.85 0.017158 0.046275
GO:0006506 GPI anchor biosynthetic process 1.49% (1/67) 5.85 0.017158 0.046275
GO:0008194 UDP-glycosyltransferase activity 2.99% (2/67) 3.37 0.016244 0.046636
GO:0016769 transferase activity, transferring nitrogenous groups 1.49% (1/67) 5.7 0.019047 0.049857
GO:0008483 transaminase activity 1.49% (1/67) 5.7 0.019047 0.049857
GO:0030983 mismatched DNA binding 1.49% (1/67) 5.7 0.019047 0.049857
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_21 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_24 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_39 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_56 0.023 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_71 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_97 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_101 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_107 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_112 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_117 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_132 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_135 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_148 0.03 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_156 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_171 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_197 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_214 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_229 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_256 0.039 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_260 0.034 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_262 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_269 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_44 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_52 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_66 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_123 0.027 Gene family Compare
Oryza sativa HCCA cluster Cluster_142 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_148 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_174 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_182 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_183 0.033 Gene family Compare
Oryza sativa HCCA cluster Cluster_196 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_199 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_234 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_263 0.022 Gene family Compare
Oryza sativa HCCA cluster Cluster_266 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_276 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_306 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_311 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_321 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_335 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_269 0.025 Gene family Compare
Picea abies HCCA cluster Cluster_362 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_369 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_375 0.025 Gene family Compare
Picea abies HCCA cluster Cluster_380 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_434 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_439 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_55 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_82 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_104 0.02 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_110 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_120 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_138 0.021 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_140 0.022 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_147 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_149 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_156 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_158 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_15 0.022 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_30 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_99 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_105 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_172 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_174 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_185 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_205 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_207 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_217 0.029 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_224 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_228 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_231 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_244 0.04 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_249 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_272 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_275 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_290 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_301 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_309 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_346 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_16 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_74 0.031 Gene family Compare
Vitis vinifera HCCA cluster Cluster_107 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_117 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_145 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_165 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_172 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_186 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_195 0.027 Gene family Compare
Vitis vinifera HCCA cluster Cluster_201 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.029 Gene family Compare
Vitis vinifera HCCA cluster Cluster_208 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_216 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_224 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_226 0.026 Gene family Compare
Vitis vinifera HCCA cluster Cluster_228 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_243 0.027 Gene family Compare
Zea mays HCCA cluster Cluster_27 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_37 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_43 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_59 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_86 0.03 Gene family Compare
Zea mays HCCA cluster Cluster_101 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_110 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_140 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_166 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_175 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_178 0.025 Gene family Compare
Zea mays HCCA cluster Cluster_196 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_197 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_200 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_209 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_221 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_233 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_260 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_266 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_271 0.03 Gene family Compare
Zea mays HCCA cluster Cluster_275 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_286 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_295 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_333 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_341 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_354 0.025 Gene family Compare
Sequences (67) (download table)

InterPro Domains

GO Terms

Family Terms