Coexpression cluster: Cluster_272 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044444 cytoplasmic part 13.33% (8/60) 2.99 7e-06 0.000752
GO:0003676 nucleic acid binding 21.67% (13/60) 2.16 5e-06 0.001005
GO:1901363 heterocyclic compound binding 28.33% (17/60) 1.31 0.000291 0.002567
GO:0097159 organic cyclic compound binding 28.33% (17/60) 1.31 0.000291 0.002567
GO:0034641 cellular nitrogen compound metabolic process 15.0% (9/60) 2.35 6.2e-05 0.002616
GO:0005198 structural molecule activity 8.33% (5/60) 3.13 0.000266 0.002685
GO:0043228 non-membrane-bounded organelle 8.33% (5/60) 3.15 0.000255 0.002704
GO:0043232 intracellular non-membrane-bounded organelle 8.33% (5/60) 3.15 0.000255 0.002704
GO:1990904 ribonucleoprotein complex 8.33% (5/60) 3.11 0.000285 0.002746
GO:0006518 peptide metabolic process 8.33% (5/60) 3.21 0.000209 0.002764
GO:0043604 amide biosynthetic process 8.33% (5/60) 3.21 0.000209 0.002764
GO:0043603 cellular amide metabolic process 8.33% (5/60) 3.17 0.000241 0.002839
GO:0009059 macromolecule biosynthetic process 10.0% (6/60) 2.78 0.000236 0.002942
GO:0009058 biosynthetic process 13.33% (8/60) 2.31 0.000199 0.003007
GO:0043043 peptide biosynthetic process 8.33% (5/60) 3.24 0.000188 0.003065
GO:0001510 RNA methylation 3.33% (2/60) 7.38 6.1e-05 0.003221
GO:0003735 structural constituent of ribosome 8.33% (5/60) 3.25 0.000185 0.00327
GO:0044424 intracellular part 15.0% (9/60) 1.99 0.000401 0.003396
GO:1901576 organic substance biosynthetic process 13.33% (8/60) 2.46 9.7e-05 0.00341
GO:1901566 organonitrogen compound biosynthetic process 10.0% (6/60) 2.85 0.000184 0.003543
GO:0044249 cellular biosynthetic process 11.67% (7/60) 2.34 0.00045 0.003671
GO:0006412 translation 8.33% (5/60) 3.26 0.000177 0.003749
GO:0034645 cellular macromolecule biosynthetic process 10.0% (6/60) 2.88 0.000166 0.003913
GO:0044271 cellular nitrogen compound biosynthetic process 11.67% (7/60) 2.82 5.8e-05 0.004133
GO:0005840 ribosome 8.33% (5/60) 3.3 0.000159 0.004205
GO:0032991 protein-containing complex 11.67% (7/60) 2.27 0.000605 0.004578
GO:0044464 cell part 15.0% (9/60) 1.91 0.000591 0.004639
GO:0003697 single-stranded DNA binding 3.33% (2/60) 6.72 0.000158 0.004799
GO:0043414 macromolecule methylation 3.33% (2/60) 5.72 0.000657 0.004806
GO:0003674 molecular_function 55.0% (33/60) 0.67 0.000888 0.006275
GO:0032259 methylation 3.33% (2/60) 5.33 0.001147 0.007842
GO:0000154 rRNA modification 1.67% (1/60) 9.18 0.00172 0.008683
GO:0016435 rRNA (guanine) methyltransferase activity 1.67% (1/60) 9.18 0.00172 0.008683
GO:0031167 rRNA methylation 1.67% (1/60) 9.18 0.00172 0.008683
GO:0036265 RNA (guanine-N7)-methylation 1.67% (1/60) 9.18 0.00172 0.008683
GO:0070475 rRNA base methylation 1.67% (1/60) 9.18 0.00172 0.008683
GO:0070476 rRNA (guanine-N7)-methylation 1.67% (1/60) 9.18 0.00172 0.008683
GO:0006784 heme a biosynthetic process 1.67% (1/60) 9.18 0.00172 0.008683
GO:0046160 heme a metabolic process 1.67% (1/60) 9.18 0.00172 0.008683
GO:0043229 intracellular organelle 10.0% (6/60) 2.27 0.001525 0.009511
GO:0043226 organelle 10.0% (6/60) 2.27 0.001525 0.009511
GO:0009451 RNA modification 3.33% (2/60) 5.14 0.001485 0.009836
GO:0044260 cellular macromolecule metabolic process 15.0% (9/60) 1.54 0.003494 0.014246
GO:0033566 gamma-tubulin complex localization 1.67% (1/60) 8.18 0.003438 0.014289
GO:0000931 gamma-tubulin large complex 1.67% (1/60) 8.18 0.003438 0.014289
GO:0140102 catalytic activity, acting on a rRNA 1.67% (1/60) 8.18 0.003438 0.014289
GO:0034629 cellular protein-containing complex localization 1.67% (1/60) 8.18 0.003438 0.014289
GO:0031503 protein-containing complex localization 1.67% (1/60) 8.18 0.003438 0.014289
GO:0044450 microtubule organizing center part 1.67% (1/60) 8.18 0.003438 0.014289
GO:0008274 gamma-tubulin ring complex 1.67% (1/60) 8.18 0.003438 0.014289
GO:0008649 rRNA methyltransferase activity 1.67% (1/60) 8.18 0.003438 0.014289
GO:0000930 gamma-tubulin complex 1.67% (1/60) 8.18 0.003438 0.014289
GO:0005622 intracellular 5.0% (3/60) 3.18 0.004463 0.017851
GO:0031515 tRNA (m1A) methyltransferase complex 1.67% (1/60) 7.6 0.005152 0.018831
GO:0030488 tRNA methylation 1.67% (1/60) 7.6 0.005152 0.018831
GO:0034708 methyltransferase complex 1.67% (1/60) 7.6 0.005152 0.018831
GO:0043527 tRNA methyltransferase complex 1.67% (1/60) 7.6 0.005152 0.018831
GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity 1.67% (1/60) 7.6 0.005152 0.018831
GO:0008168 methyltransferase activity 5.0% (3/60) 3.05 0.005721 0.020557
GO:0016741 transferase activity, transferring one-carbon groups 5.0% (3/60) 2.99 0.006422 0.022692
GO:1901360 organic cyclic compound metabolic process 8.33% (5/60) 1.99 0.008388 0.029152
GO:0003713 transcription coactivator activity 1.67% (1/60) 6.86 0.008572 0.029311
GO:0000049 tRNA binding 1.67% (1/60) 6.6 0.010278 0.033522
GO:0005759 mitochondrial matrix 1.67% (1/60) 6.6 0.010278 0.033522
GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 1.67% (1/60) 6.6 0.010278 0.033522
GO:0003723 RNA binding 5.0% (3/60) 2.69 0.011459 0.036806
GO:0034470 ncRNA processing 3.33% (2/60) 3.61 0.011726 0.037103
GO:0006783 heme biosynthetic process 1.67% (1/60) 6.38 0.011981 0.037352
GO:0006807 nitrogen compound metabolic process 16.67% (10/60) 1.17 0.012326 0.037872
GO:1901362 organic cyclic compound biosynthetic process 5.0% (3/60) 2.58 0.01386 0.040251
GO:0031974 membrane-enclosed lumen 1.67% (1/60) 6.18 0.013681 0.040282
GO:0043233 organelle lumen 1.67% (1/60) 6.18 0.013681 0.040282
GO:0070013 intracellular organelle lumen 1.67% (1/60) 6.18 0.013681 0.040282
GO:0042168 heme metabolic process 1.67% (1/60) 6.01 0.015378 0.043468
GO:0046148 pigment biosynthetic process 1.67% (1/60) 6.01 0.015378 0.043468
GO:0005575 cellular_component 16.67% (10/60) 1.09 0.017432 0.048627
GO:0044237 cellular metabolic process 16.67% (10/60) 1.07 0.018851 0.049955
GO:0043170 macromolecule metabolic process 15.0% (9/60) 1.15 0.019103 0.049999
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_14 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_39 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_61 0.055 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_77 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_85 0.031 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_97 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_135 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.042 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_146 0.031 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_152 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_163 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.068 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_185 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.091 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_204 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_211 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_236 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_245 0.016 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_43 0.023 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.021 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_71 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_110 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_6 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_10 0.027 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_27 0.022 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_64 0.031 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_98 0.022 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_124 0.02 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_152 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_45 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_47 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.067 Gene family Compare
Oryza sativa HCCA cluster Cluster_81 0.047 Gene family Compare
Oryza sativa HCCA cluster Cluster_145 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_161 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_170 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_182 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_196 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_239 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_256 0.055 Gene family Compare
Oryza sativa HCCA cluster Cluster_276 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_283 0.027 Gene family Compare
Oryza sativa HCCA cluster Cluster_284 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_291 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_311 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_335 0.028 Gene family Compare
Picea abies HCCA cluster Cluster_5 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_27 0.027 Gene family Compare
Picea abies HCCA cluster Cluster_64 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_67 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_73 0.043 Gene family Compare
Picea abies HCCA cluster Cluster_175 0.023 Gene family Compare
Picea abies HCCA cluster Cluster_208 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_222 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_258 0.03 Gene family Compare
Picea abies HCCA cluster Cluster_275 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_346 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_380 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_425 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_475 0.028 Gene family Compare
Picea abies HCCA cluster Cluster_482 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_885 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_21 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_26 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_41 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_55 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_64 0.021 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_66 0.028 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_103 0.031 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_110 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_113 0.021 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_120 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_130 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_136 0.027 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_166 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_16 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_100 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_122 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_166 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_231 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_288 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_302 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_10 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.058 Gene family Compare
Vitis vinifera HCCA cluster Cluster_77 0.027 Gene family Compare
Vitis vinifera HCCA cluster Cluster_85 0.051 Gene family Compare
Vitis vinifera HCCA cluster Cluster_104 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_121 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_147 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_149 0.026 Gene family Compare
Vitis vinifera HCCA cluster Cluster_182 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_195 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_207 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_224 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_26 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_43 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_54 0.029 Gene family Compare
Zea mays HCCA cluster Cluster_101 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_119 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_120 0.034 Gene family Compare
Zea mays HCCA cluster Cluster_140 0.027 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_162 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_173 0.03 Gene family Compare
Zea mays HCCA cluster Cluster_209 0.042 Gene family Compare
Zea mays HCCA cluster Cluster_211 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_221 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_257 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_259 0.049 Gene family Compare
Zea mays HCCA cluster Cluster_307 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_331 0.05 Gene family Compare
Zea mays HCCA cluster Cluster_333 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_341 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_345 0.042 Gene family Compare
Zea mays HCCA cluster Cluster_346 0.039 Gene family Compare
Zea mays HCCA cluster Cluster_352 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_354 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_376 0.014 Gene family Compare
Sequences (60) (download table)

InterPro Domains

GO Terms

Family Terms