Coexpression cluster: Cluster_52 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034062 5'-3' RNA polymerase activity 5.95% (5/84) 4.87 1e-06 3.4e-05
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 5.95% (5/84) 4.87 1e-06 3.4e-05
GO:0097747 RNA polymerase activity 5.95% (5/84) 4.87 1e-06 3.4e-05
GO:0097659 nucleic acid-templated transcription 5.95% (5/84) 4.67 2e-06 4.1e-05
GO:0006351 transcription, DNA-templated 5.95% (5/84) 4.67 2e-06 4.1e-05
GO:0016779 nucleotidyltransferase activity 5.95% (5/84) 4.61 2e-06 4.2e-05
GO:0032774 RNA biosynthetic process 5.95% (5/84) 4.54 3e-06 4.6e-05
GO:0034654 nucleobase-containing compound biosynthetic process 5.95% (5/84) 4.26 7e-06 9.3e-05
GO:0140098 catalytic activity, acting on RNA 5.95% (5/84) 4.27 6e-06 0.0001
GO:0018130 heterocycle biosynthetic process 5.95% (5/84) 4.11 1.1e-05 0.000116
GO:0003677 DNA binding 7.14% (6/84) 3.59 1.1e-05 0.000125
GO:1901362 organic cyclic compound biosynthetic process 5.95% (5/84) 4.06 1.3e-05 0.000127
GO:0019438 aromatic compound biosynthetic process 5.95% (5/84) 4.13 1e-05 0.000127
GO:0016070 RNA metabolic process 5.95% (5/84) 3.79 3.3e-05 0.000291
GO:0090304 nucleic acid metabolic process 5.95% (5/84) 3.43 0.000105 0.000818
GO:0016772 transferase activity, transferring phosphorus-containing groups 7.14% (6/84) 3.02 0.0001 0.00083
GO:0003824 catalytic activity 13.1% (11/84) 1.86 0.000215 0.001578
GO:0034645 cellular macromolecule biosynthetic process 7.14% (6/84) 2.79 0.000239 0.001659
GO:0009059 macromolecule biosynthetic process 7.14% (6/84) 2.76 0.000267 0.001756
GO:0006139 nucleobase-containing compound metabolic process 5.95% (5/84) 3.12 0.000285 0.00178
GO:0006725 cellular aromatic compound metabolic process 5.95% (5/84) 3.05 0.000363 0.00197
GO:1901360 organic cyclic compound metabolic process 5.95% (5/84) 3.03 0.000384 0.002001
GO:0046483 heterocycle metabolic process 5.95% (5/84) 3.05 0.000355 0.00202
GO:0044271 cellular nitrogen compound biosynthetic process 7.14% (6/84) 2.7 0.00034 0.002027
GO:0043170 macromolecule metabolic process 9.52% (8/84) 2.06 0.000662 0.003181
GO:0003676 nucleic acid binding 7.14% (6/84) 2.52 0.000643 0.003215
GO:0016740 transferase activity 7.14% (6/84) 2.49 0.000712 0.003297
GO:0044249 cellular biosynthetic process 7.14% (6/84) 2.45 0.000826 0.003689
GO:1901576 organic substance biosynthetic process 7.14% (6/84) 2.43 0.000899 0.003876
GO:0009058 biosynthetic process 7.14% (6/84) 2.38 0.00106 0.004416
GO:0044260 cellular macromolecule metabolic process 8.33% (7/84) 2.09 0.001309 0.005112
GO:0006807 nitrogen compound metabolic process 9.52% (8/84) 1.92 0.00127 0.00512
GO:0034641 cellular nitrogen compound metabolic process 7.14% (6/84) 2.26 0.001608 0.00609
GO:0044238 primary metabolic process 9.52% (8/84) 1.77 0.002453 0.009017
GO:0045454 cell redox homeostasis 1.19% (1/84) 8.59 0.002588 0.009243
GO:0071704 organic substance metabolic process 9.52% (8/84) 1.7 0.003231 0.011218
GO:0009987 cellular process 10.71% (9/84) 1.55 0.003602 0.012169
GO:0016491 oxidoreductase activity 4.76% (4/84) 2.62 0.004153 0.01366
GO:0008150 biological_process 11.9% (10/84) 1.4 0.004562 0.014623
GO:0008152 metabolic process 9.52% (8/84) 1.55 0.006125 0.019139
GO:0003674 molecular_function 15.48% (13/84) 1.12 0.006336 0.019318
GO:1901363 heterocyclic compound binding 8.33% (7/84) 1.62 0.007737 0.02249
GO:0097159 organic cyclic compound binding 8.33% (7/84) 1.62 0.007737 0.02249
GO:0003954 NADH dehydrogenase activity 1.19% (1/84) 6.59 0.010312 0.026855
GO:0003955 NAD(P)H dehydrogenase (quinone) activity 1.19% (1/84) 6.59 0.010312 0.026855
GO:0008137 NADH dehydrogenase (ubiquinone) activity 1.19% (1/84) 6.59 0.010312 0.026855
GO:0050136 NADH dehydrogenase (quinone) activity 1.19% (1/84) 6.59 0.010312 0.026855
GO:0044237 cellular metabolic process 8.33% (7/84) 1.57 0.009475 0.026917
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 1.19% (1/84) 6.27 0.012874 0.032184
GO:0019725 cellular homeostasis 1.19% (1/84) 6.27 0.012874 0.032184
GO:0055114 obsolete oxidation-reduction process 3.57% (3/84) 2.42 0.018665 0.045747
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Physcomitrella patens HCCA Cluster_19 0.04 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_30 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_38 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_50 0.041 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_69 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_196 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_217 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_328 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.047 LandPlants Compare
Physcomitrella patens HCCA Cluster_20 0.031 LandPlants Compare
Physcomitrella patens HCCA Cluster_24 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_30 0.033 LandPlants Compare
Physcomitrella patens HCCA Cluster_38 0.024 LandPlants Compare
Physcomitrella patens HCCA Cluster_48 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_50 0.047 LandPlants Compare
Physcomitrella patens HCCA Cluster_69 0.027 LandPlants Compare
Physcomitrella patens HCCA Cluster_76 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_86 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_88 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_90 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_100 0.018 LandPlants Compare
Physcomitrella patens HCCA Cluster_127 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_152 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_196 0.027 LandPlants Compare
Physcomitrella patens HCCA Cluster_217 0.024 LandPlants Compare
Physcomitrella patens HCCA Cluster_328 0.021 LandPlants Compare
Picea abies HCCA Cluster_130 0.016 LandPlants Compare
Sequences (84) (download table)

InterPro Domains

GO Terms

Family Terms