Coexpression cluster: Cluster_140 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 46.54% (74/159) 1.0 0.0 0.0
GO:0005488 binding 27.04% (43/159) 0.99 6e-06 0.000691
GO:0034645 cellular macromolecule biosynthetic process 7.55% (12/159) 2.08 3.1e-05 0.00122
GO:1901363 heterocyclic compound binding 18.24% (29/159) 1.17 3e-05 0.001418
GO:0097159 organic cyclic compound binding 18.24% (29/159) 1.17 3e-05 0.001418
GO:0019538 protein metabolic process 11.95% (19/159) 1.51 4.4e-05 0.001465
GO:0017111 ribonucleoside triphosphate phosphatase activity 5.66% (9/159) 2.44 5e-05 0.001475
GO:0003824 catalytic activity 20.75% (33/159) 1.03 5.7e-05 0.001476
GO:0016817 hydrolase activity, acting on acid anhydrides 5.66% (9/159) 2.36 7.6e-05 0.001494
GO:0071704 organic substance metabolic process 16.35% (26/159) 1.17 8.5e-05 0.00153
GO:0009059 macromolecule biosynthetic process 7.55% (12/159) 1.92 9.4e-05 0.001576
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 5.66% (9/159) 2.36 7.5e-05 0.001596
GO:0044238 primary metabolic process 15.72% (25/159) 1.18 0.000103 0.001621
GO:0016462 pyrophosphatase activity 5.66% (9/159) 2.37 7.2e-05 0.001682
GO:0043170 macromolecule metabolic process 13.84% (22/159) 1.42 2.7e-05 0.002127
GO:1901564 organonitrogen compound metabolic process 12.58% (20/159) 1.32 0.000157 0.00231
GO:0044260 cellular macromolecule metabolic process 7.55% (12/159) 1.79 0.000212 0.002935
GO:0043604 amide biosynthetic process 6.29% (10/159) 1.92 0.00035 0.003739
GO:0008152 metabolic process 16.35% (26/159) 1.03 0.000383 0.003751
GO:0006518 peptide metabolic process 6.29% (10/159) 1.88 0.000434 0.003781
GO:0110165 cellular anatomical entity 11.32% (18/159) 1.31 0.000371 0.003796
GO:0043043 peptide biosynthetic process 6.29% (10/159) 1.93 0.00034 0.003804
GO:0044249 cellular biosynthetic process 8.18% (13/159) 1.59 0.000423 0.003821
GO:0008150 biological_process 22.64% (36/159) 0.85 0.000294 0.003844
GO:0006807 nitrogen compound metabolic process 13.21% (21/159) 1.18 0.000413 0.003879
GO:1901566 organonitrogen compound biosynthetic process 6.92% (11/159) 1.74 0.000503 0.00394
GO:0003735 structural constituent of ribosome 6.29% (10/159) 1.93 0.000337 0.003965
GO:0043603 amide metabolic process 6.29% (10/159) 1.86 0.0005 0.004048
GO:0006412 translation 6.29% (10/159) 1.93 0.000328 0.004052
GO:0005198 structural molecule activity 6.29% (10/159) 1.86 0.000489 0.004106
GO:0044237 cellular metabolic process 13.21% (21/159) 1.14 0.000554 0.004198
GO:1901576 organic substance biosynthetic process 8.18% (13/159) 1.52 0.000681 0.005004
GO:0016787 hydrolase activity 8.18% (13/159) 1.5 0.000749 0.005332
GO:0003700 DNA-binding transcription factor activity 3.77% (6/159) 2.42 0.000978 0.006763
GO:0005575 cellular_component 11.95% (19/159) 1.13 0.001101 0.00719
GO:0009058 biosynthetic process 8.18% (13/159) 1.44 0.001139 0.007235
GO:0005840 ribosome 5.66% (9/159) 1.83 0.001095 0.007354
GO:0140110 transcription regulator activity 3.77% (6/159) 2.36 0.001194 0.007382
GO:0043232 intracellular non-membrane-bounded organelle 5.66% (9/159) 1.79 0.001327 0.007796
GO:0043228 non-membrane-bounded organelle 5.66% (9/159) 1.79 0.001327 0.007796
GO:0043168 anion binding 10.06% (16/159) 1.23 0.001413 0.008099
GO:0032555 purine ribonucleotide binding 9.43% (15/159) 1.26 0.001671 0.00913
GO:0043226 organelle 6.29% (10/159) 1.61 0.001758 0.009183
GO:0043167 ion binding 13.21% (21/159) 1.02 0.001646 0.009211
GO:0043229 intracellular organelle 6.29% (10/159) 1.62 0.001749 0.00934
GO:0032553 ribonucleotide binding 9.43% (15/159) 1.23 0.002 0.01022
GO:0097367 carbohydrate derivative binding 9.43% (15/159) 1.22 0.00213 0.010648
GO:0003924 GTPase activity 3.14% (5/159) 2.45 0.002375 0.011165
GO:0003676 nucleic acid binding 8.18% (13/159) 1.31 0.002428 0.011188
GO:0044271 cellular nitrogen compound biosynthetic process 6.29% (10/159) 1.56 0.002361 0.011325
GO:0036094 small molecule binding 10.06% (16/159) 1.16 0.002333 0.01142
GO:0016740 transferase activity 8.81% (14/159) 1.25 0.002549 0.011521
GO:0009987 cellular process 15.72% (25/159) 0.85 0.002796 0.012167
GO:0017076 purine nucleotide binding 9.43% (15/159) 1.18 0.002785 0.01235
GO:0035639 purine ribonucleoside triphosphate binding 8.81% (14/159) 1.2 0.003432 0.014663
GO:0016829 lyase activity 2.52% (4/159) 2.68 0.003683 0.015456
GO:0000166 nucleotide binding 9.43% (15/159) 1.12 0.00415 0.016814
GO:1901265 nucleoside phosphate binding 9.43% (15/159) 1.12 0.00415 0.016814
GO:0003723 RNA binding 4.4% (7/159) 1.77 0.004756 0.018945
GO:0016759 cellulose synthase activity 1.26% (2/159) 4.14 0.005863 0.021871
GO:0016836 hydro-lyase activity 1.26% (2/159) 4.14 0.005863 0.021871
GO:0030244 cellulose biosynthetic process 1.26% (2/159) 4.14 0.005863 0.021871
GO:0016760 cellulose synthase (UDP-forming) activity 1.26% (2/159) 4.14 0.005863 0.021871
GO:0016758 hexosyltransferase activity 1.89% (3/159) 3.02 0.006169 0.022652
GO:0030243 cellulose metabolic process 1.26% (2/159) 4.07 0.00637 0.023029
GO:0016887 ATP hydrolysis activity 2.52% (4/159) 2.43 0.00686 0.024424
GO:0016835 carbon-oxygen lyase activity 1.26% (2/159) 3.93 0.007719 0.027073
GO:0034641 cellular nitrogen compound metabolic process 6.92% (11/159) 1.23 0.007859 0.02716
GO:0051252 regulation of RNA metabolic process 3.77% (6/159) 1.7 0.011003 0.032322
GO:2001141 regulation of RNA biosynthetic process 3.77% (6/159) 1.7 0.01087 0.032334
GO:0006355 regulation of DNA-templated transcription 3.77% (6/159) 1.7 0.01087 0.032334
GO:1903506 regulation of nucleic acid-templated transcription 3.77% (6/159) 1.7 0.01087 0.032334
GO:0043565 sequence-specific DNA binding 1.89% (3/159) 2.74 0.010481 0.032408
GO:0016598 protein arginylation 0.63% (1/159) 6.66 0.009861 0.03264
GO:0004057 arginyltransferase activity 0.63% (1/159) 6.66 0.009861 0.03264
GO:0009250 glucan biosynthetic process 1.26% (2/159) 3.7 0.01044 0.032711
GO:0000271 polysaccharide biosynthetic process 1.26% (2/159) 3.7 0.01044 0.032711
GO:0033692 cellular polysaccharide biosynthetic process 1.26% (2/159) 3.7 0.01044 0.032711
GO:0051273 beta-glucan metabolic process 1.26% (2/159) 3.7 0.01044 0.032711
GO:0005525 GTP binding 3.14% (5/159) 1.9 0.011464 0.032854
GO:0032561 guanyl ribonucleotide binding 3.14% (5/159) 1.9 0.011464 0.032854
GO:0035251 UDP-glucosyltransferase activity 1.26% (2/159) 3.61 0.011766 0.032917
GO:0019219 regulation of nucleobase-containing compound metabolic process 3.77% (6/159) 1.68 0.011687 0.033089
GO:0051274 beta-glucan biosynthetic process 1.26% (2/159) 3.75 0.009803 0.033388
GO:0019001 guanyl nucleotide binding 3.14% (5/159) 1.87 0.012326 0.03368
GO:0004764 shikimate 3-dehydrogenase (NADP+) activity 0.63% (1/159) 6.34 0.012312 0.034038
GO:0010556 regulation of macromolecule biosynthetic process 3.77% (6/159) 1.63 0.013527 0.035716
GO:0031326 regulation of cellular biosynthetic process 3.77% (6/159) 1.63 0.013527 0.035716
GO:0009889 regulation of biosynthetic process 3.77% (6/159) 1.63 0.013527 0.035716
GO:0008194 UDP-glycosyltransferase activity 1.89% (3/159) 2.59 0.014057 0.036705
GO:0044042 glucan metabolic process 1.26% (2/159) 3.41 0.015383 0.037269
GO:0006073 cellular glucan metabolic process 1.26% (2/159) 3.41 0.015383 0.037269
GO:0044264 cellular polysaccharide metabolic process 1.26% (2/159) 3.41 0.015383 0.037269
GO:0004781 sulfate adenylyltransferase (ATP) activity 0.63% (1/159) 6.07 0.014756 0.037286
GO:0004779 sulfate adenylyltransferase activity 0.63% (1/159) 6.07 0.014756 0.037286
GO:0010468 regulation of gene expression 3.77% (6/159) 1.61 0.014723 0.038021
GO:0036211 protein modification process 5.03% (8/159) 1.33 0.015246 0.038115
GO:0016755 aminoacyltransferase activity 0.63% (1/159) 5.85 0.017194 0.039229
GO:0008964 phosphoenolpyruvate carboxylase activity 0.63% (1/159) 5.85 0.017194 0.039229
GO:0080090 regulation of primary metabolic process 3.77% (6/159) 1.56 0.016878 0.03927
GO:0051171 regulation of nitrogen compound metabolic process 3.77% (6/159) 1.56 0.016878 0.03927
GO:0031323 regulation of cellular metabolic process 3.77% (6/159) 1.56 0.016878 0.03927
GO:0046527 glucosyltransferase activity 1.26% (2/159) 3.35 0.01655 0.039687
GO:0043412 macromolecule modification 5.03% (8/159) 1.29 0.017892 0.04043
GO:0060255 regulation of macromolecule metabolic process 3.77% (6/159) 1.54 0.01808 0.040465
GO:0019222 regulation of metabolic process 3.77% (6/159) 1.54 0.01827 0.040504
GO:0015977 carbon fixation 0.63% (1/159) 5.66 0.019626 0.043104
GO:0005976 polysaccharide metabolic process 1.26% (2/159) 3.15 0.021578 0.046952
GO:0016757 glycosyltransferase activity 2.52% (4/159) 1.91 0.022554 0.048183
GO:0003677 DNA binding 3.77% (6/159) 1.47 0.022473 0.048451
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_121 0.022 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_34 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_318 0.05 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_177 0.022 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_75 0.026 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_113 0.091 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_38 0.02 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_63 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_19 0.022 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_170 0.032 OrthoFinder output from all 47 species Compare
Sequences (159) (download table)

InterPro Domains

GO Terms

Family Terms