Coexpression cluster: Cluster_3 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0031224 intrinsic component of membrane 13.43% (18/134) 2.7 0.0 0.0
GO:0016021 integral component of membrane 13.43% (18/134) 2.73 0.0 0.0
GO:0044425 membrane part 13.43% (18/134) 2.38 0.0 1e-06
GO:0005575 cellular_component 20.9% (28/134) 1.42 1e-06 4.8e-05
GO:0043604 amide biosynthetic process 5.97% (8/134) 2.73 3.1e-05 0.000339
GO:0006518 peptide metabolic process 5.97% (8/134) 2.73 3.1e-05 0.000339
GO:0005198 structural molecule activity 5.97% (8/134) 2.65 4.5e-05 0.000369
GO:0043228 non-membrane-bounded organelle 5.97% (8/134) 2.67 4.2e-05 0.000369
GO:0043232 intracellular non-membrane-bounded organelle 5.97% (8/134) 2.67 4.2e-05 0.000369
GO:0009059 macromolecule biosynthetic process 7.46% (10/134) 2.36 2.8e-05 0.000372
GO:0043043 peptide biosynthetic process 5.97% (8/134) 2.76 2.6e-05 0.000385
GO:1990904 ribonucleoprotein complex 5.97% (8/134) 2.63 5e-05 0.000386
GO:0043603 cellular amide metabolic process 5.97% (8/134) 2.68 3.8e-05 0.00039
GO:0003735 structural constituent of ribosome 5.97% (8/134) 2.77 2.6e-05 0.000423
GO:0034645 cellular macromolecule biosynthetic process 7.46% (10/134) 2.45 1.6e-05 0.000427
GO:0005840 ribosome 5.97% (8/134) 2.81 2e-05 0.000445
GO:0006412 translation 5.97% (8/134) 2.78 2.4e-05 0.000451
GO:0044271 cellular nitrogen compound biosynthetic process 7.46% (10/134) 2.18 8.2e-05 0.000599
GO:0044444 cytoplasmic part 7.46% (10/134) 2.15 9.3e-05 0.000644
GO:0048038 quinone binding 2.24% (3/134) 4.97 0.00012 0.000791
GO:0016651 oxidoreductase activity, acting on NAD(P)H 2.24% (3/134) 4.25 0.000531 0.003048
GO:0043226 organelle 7.46% (10/134) 1.84 0.000512 0.003072
GO:0043229 intracellular organelle 7.46% (10/134) 1.84 0.000512 0.003072
GO:1901566 organonitrogen compound biosynthetic process 5.97% (8/134) 2.11 0.000589 0.003239
GO:0051287 NAD binding 2.24% (3/134) 3.88 0.001129 0.00573
GO:0044249 cellular biosynthetic process 7.46% (10/134) 1.69 0.001124 0.005933
GO:1901576 organic substance biosynthetic process 7.46% (10/134) 1.62 0.001624 0.007939
GO:0009058 biosynthetic process 7.46% (10/134) 1.47 0.003466 0.01634
GO:0034641 cellular nitrogen compound metabolic process 7.46% (10/134) 1.34 0.006428 0.02926
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_79 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_80 0.071 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_165 0.021 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_35 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_83 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_91 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_139 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_243 0.032 Gene family Compare
Oryza sativa HCCA cluster Cluster_326 0.026 Gene family Compare
Picea abies HCCA cluster Cluster_110 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_28 0.051 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_2 0.034 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_4 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_29 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_54 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_74 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_107 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_114 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_191 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_220 0.032 Gene family Compare
Vitis vinifera HCCA cluster Cluster_12 0.027 Gene family Compare
Vitis vinifera HCCA cluster Cluster_64 0.016 Gene family Compare
Sequences (134) (download table)

InterPro Domains

GO Terms

Family Terms