Coexpression cluster: Cluster_312 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034660 ncRNA metabolic process 8.11% (6/74) 4.4 0.0 0.000102
GO:0034470 ncRNA processing 6.76% (5/74) 4.63 2e-06 0.000223
GO:0006399 tRNA metabolic process 6.76% (5/74) 4.42 4e-06 0.000306
GO:0090304 nucleic acid metabolic process 10.81% (8/74) 2.91 1.1e-05 0.00066
GO:0016070 RNA metabolic process 9.46% (7/74) 3.11 1.7e-05 0.000669
GO:0008033 tRNA processing 5.41% (4/74) 4.73 1.6e-05 0.000775
GO:0006396 RNA processing 6.76% (5/74) 3.68 4.6e-05 0.001227
GO:0002098 tRNA wobble uridine modification 2.7% (2/74) 7.56 4.4e-05 0.001316
GO:0002097 tRNA wobble base modification 2.7% (2/74) 7.56 4.4e-05 0.001316
GO:0034641 cellular nitrogen compound metabolic process 13.51% (10/74) 2.2 6.1e-05 0.001455
GO:0006139 nucleobase-containing compound metabolic process 10.81% (8/74) 2.54 7e-05 0.001524
GO:0006725 cellular aromatic compound metabolic process 10.81% (8/74) 2.4 0.000133 0.002443
GO:0046483 heterocycle metabolic process 10.81% (8/74) 2.41 0.000128 0.002547
GO:1901360 organic cyclic compound metabolic process 10.81% (8/74) 2.37 0.000158 0.00269
GO:0006400 tRNA modification 2.7% (2/74) 6.3 0.000289 0.004587
GO:0043170 macromolecule metabolic process 18.92% (14/74) 1.48 0.0004 0.00595
GO:0006807 nitrogen compound metabolic process 18.92% (14/74) 1.35 0.000983 0.013757
GO:0140098 catalytic activity, acting on RNA 5.41% (4/74) 3.11 0.001213 0.016041
GO:0000213 tRNA-intron endonuclease activity 1.35% (1/74) 8.88 0.002122 0.020198
GO:0051383 kinetochore organization 1.35% (1/74) 8.88 0.002122 0.020198
GO:0051382 kinetochore assembly 1.35% (1/74) 8.88 0.002122 0.020198
GO:0004549 tRNA-specific ribonuclease activity 1.35% (1/74) 8.88 0.002122 0.020198
GO:0043189 H4/H2A histone acetyltransferase complex 1.35% (1/74) 8.88 0.002122 0.020198
GO:1902562 H4 histone acetyltransferase complex 1.35% (1/74) 8.88 0.002122 0.020198
GO:0009451 RNA modification 2.7% (2/74) 4.84 0.002247 0.020567
GO:0032259 methylation 2.7% (2/74) 5.02 0.001737 0.021761
GO:0006480 N-terminal protein amino acid methylation 1.35% (1/74) 7.88 0.004239 0.032543
GO:0034227 tRNA thio-modification 1.35% (1/74) 7.88 0.004239 0.032543
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation 1.35% (1/74) 7.88 0.004239 0.032543
GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation 1.35% (1/74) 7.88 0.004239 0.032543
GO:0044451 nucleoplasm part 2.7% (2/74) 4.42 0.003965 0.034954
GO:0044237 cellular metabolic process 17.57% (13/74) 1.15 0.005144 0.038257
GO:0031365 N-terminal protein amino acid modification 1.35% (1/74) 7.3 0.006352 0.045808
GO:0044238 primary metabolic process 18.92% (14/74) 1.05 0.006548 0.045836
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_21 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_25 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_117 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_139 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_152 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_185 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_225 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_237 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_244 0.023 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_261 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_201 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_101 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_101 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_182 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_271 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_306 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_311 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_328 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_164 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_234 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_432 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_184 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_205 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_247 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_281 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_283 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_300 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_313 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_49 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_77 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_145 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_149 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_202 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_210 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_231 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_74 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_259 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_294 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_304 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_333 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_347 0.015 Gene family Compare
Sequences (74) (download table)

InterPro Domains

GO Terms

Family Terms