Coexpression cluster: Cluster_19 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0097747 RNA polymerase activity 5.63% (4/71) 4.79 1.4e-05 0.000337
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 5.63% (4/71) 4.79 1.4e-05 0.000337
GO:0034062 5'-3' RNA polymerase activity 5.63% (4/71) 4.79 1.4e-05 0.000337
GO:0016779 nucleotidyltransferase activity 5.63% (4/71) 4.53 2.8e-05 0.000344
GO:0006351 transcription, DNA-templated 5.63% (4/71) 4.59 2.4e-05 0.000354
GO:0097659 nucleic acid-templated transcription 5.63% (4/71) 4.59 2.4e-05 0.000354
GO:0032774 RNA biosynthetic process 5.63% (4/71) 4.46 3.4e-05 0.000358
GO:0090304 nucleic acid metabolic process 7.04% (5/71) 3.67 4.7e-05 0.000433
GO:0034654 nucleobase-containing compound biosynthetic process 5.63% (4/71) 4.18 7.3e-05 0.000541
GO:0140098 catalytic activity, acting on RNA 5.63% (4/71) 4.19 7e-05 0.000578
GO:0018130 heterocycle biosynthetic process 5.63% (4/71) 4.03 0.000109 0.000674
GO:0006139 nucleobase-containing compound metabolic process 7.04% (5/71) 3.36 0.000129 0.000682
GO:0019438 aromatic compound biosynthetic process 5.63% (4/71) 4.06 0.000102 0.000685
GO:1901362 organic cyclic compound biosynthetic process 5.63% (4/71) 3.98 0.000125 0.000712
GO:1901360 organic cyclic compound metabolic process 7.04% (5/71) 3.27 0.000175 0.000762
GO:0006725 cellular aromatic compound metabolic process 7.04% (5/71) 3.29 0.000165 0.000763
GO:0046483 heterocycle metabolic process 7.04% (5/71) 3.29 0.000162 0.000798
GO:0016070 RNA metabolic process 5.63% (4/71) 3.71 0.000257 0.001058
GO:0003677 DNA binding 5.63% (4/71) 3.25 0.000846 0.003296
GO:0016772 transferase activity, transferring phosphorus-containing groups 5.63% (4/71) 2.68 0.003565 0.013191
GO:0034641 cellular nitrogen compound metabolic process 7.04% (5/71) 2.24 0.004158 0.014652
GO:0034645 cellular macromolecule biosynthetic process 5.63% (4/71) 2.45 0.006294 0.021169
GO:0009059 macromolecule biosynthetic process 5.63% (4/71) 2.42 0.006761 0.021754
GO:0044271 cellular nitrogen compound biosynthetic process 5.63% (4/71) 2.35 0.007916 0.024408
GO:0060249 anatomical structure homeostasis 1.41% (1/71) 6.25 0.013054 0.0322
GO:0032200 telomere organization 1.41% (1/71) 6.25 0.013054 0.0322
GO:0000723 telomere maintenance 1.41% (1/71) 6.25 0.013054 0.0322
GO:1901576 organic substance biosynthetic process 5.63% (4/71) 2.08 0.014817 0.032248
GO:0044249 cellular biosynthetic process 5.63% (4/71) 2.11 0.014032 0.032449
GO:0044238 primary metabolic process 8.45% (6/71) 1.59 0.014549 0.032626
GO:0003824 catalytic activity 9.86% (7/71) 1.45 0.014005 0.033431
GO:0009058 biosynthetic process 5.63% (4/71) 2.04 0.016468 0.034819
GO:0016740 transferase activity 5.63% (4/71) 2.15 0.01275 0.034944
GO:0003676 nucleic acid binding 5.63% (4/71) 2.18 0.011938 0.035337
GO:0071704 organic substance metabolic process 8.45% (6/71) 1.53 0.017783 0.035566
GO:0051276 chromosome organization 1.41% (1/71) 5.84 0.017368 0.035701
GO:0044260 cellular macromolecule metabolic process 7.04% (5/71) 1.85 0.012735 0.036246
GO:0003678 DNA helicase activity 1.41% (1/71) 5.38 0.023804 0.044038
GO:0042592 homeostatic process 1.41% (1/71) 5.38 0.023804 0.044038
GO:0043170 macromolecule metabolic process 7.04% (5/71) 1.63 0.022924 0.044641
GO:0008152 metabolic process 8.45% (6/71) 1.37 0.028303 0.049867
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Physcomitrella patens HCCA Cluster_20 0.065 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_30 0.039 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_38 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_48 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_49 0.05 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_50 0.041 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_52 0.04 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_69 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_76 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_79 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_80 0.037 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_84 0.038 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_85 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_86 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_88 0.042 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_100 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_101 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_110 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_115 0.065 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_127 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_156 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_162 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_174 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_175 0.04 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_181 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_196 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_217 0.068 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_243 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_259 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_316 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_292 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_20 0.058 LandPlants Compare
Physcomitrella patens HCCA Cluster_30 0.039 LandPlants Compare
Physcomitrella patens HCCA Cluster_35 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_38 0.034 LandPlants Compare
Physcomitrella patens HCCA Cluster_48 0.025 LandPlants Compare
Physcomitrella patens HCCA Cluster_49 0.05 LandPlants Compare
Physcomitrella patens HCCA Cluster_50 0.046 LandPlants Compare
Physcomitrella patens HCCA Cluster_52 0.047 LandPlants Compare
Physcomitrella patens HCCA Cluster_69 0.027 LandPlants Compare
Physcomitrella patens HCCA Cluster_76 0.025 LandPlants Compare
Physcomitrella patens HCCA Cluster_80 0.036 LandPlants Compare
Physcomitrella patens HCCA Cluster_84 0.022 LandPlants Compare
Physcomitrella patens HCCA Cluster_86 0.022 LandPlants Compare
Physcomitrella patens HCCA Cluster_88 0.042 LandPlants Compare
Physcomitrella patens HCCA Cluster_96 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_100 0.027 LandPlants Compare
Physcomitrella patens HCCA Cluster_101 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_104 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_108 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_110 0.024 LandPlants Compare
Physcomitrella patens HCCA Cluster_115 0.065 LandPlants Compare
Physcomitrella patens HCCA Cluster_127 0.022 LandPlants Compare
Physcomitrella patens HCCA Cluster_154 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_156 0.019 LandPlants Compare
Physcomitrella patens HCCA Cluster_162 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_174 0.024 LandPlants Compare
Physcomitrella patens HCCA Cluster_175 0.04 LandPlants Compare
Physcomitrella patens HCCA Cluster_181 0.034 LandPlants Compare
Physcomitrella patens HCCA Cluster_196 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_217 0.067 LandPlants Compare
Physcomitrella patens HCCA Cluster_242 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_243 0.022 LandPlants Compare
Physcomitrella patens HCCA Cluster_259 0.019 LandPlants Compare
Physcomitrella patens HCCA Cluster_316 0.021 LandPlants Compare
Picea abies HCCA Cluster_189 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_61 0.015 LandPlants Compare
Sequences (71) (download table)

InterPro Domains

GO Terms

Family Terms