Coexpression cluster: Cluster_23 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901566 organonitrogen compound biosynthetic process 12.0% (6/50) 3.73 6e-06 0.000585
GO:0009058 biosynthetic process 12.0% (6/50) 3.13 6.1e-05 0.0012
GO:1901576 organic substance biosynthetic process 12.0% (6/50) 3.18 5.1e-05 0.001258
GO:0044249 cellular biosynthetic process 12.0% (6/50) 3.2 4.7e-05 0.001531
GO:0044283 small molecule biosynthetic process 6.0% (3/50) 5.47 4.4e-05 0.002135
GO:0008652 cellular amino acid biosynthetic process 4.0% (2/50) 6.17 0.00035 0.005721
GO:0044237 cellular metabolic process 14.0% (7/50) 2.32 0.000474 0.005807
GO:1901564 organonitrogen compound metabolic process 12.0% (6/50) 2.6 0.000451 0.006315
GO:0071704 organic substance metabolic process 14.0% (7/50) 2.26 0.000604 0.006575
GO:0044281 small molecule metabolic process 6.0% (3/50) 4.01 0.000872 0.008542
GO:0008152 metabolic process 14.0% (7/50) 2.1 0.001133 0.009252
GO:0046394 carboxylic acid biosynthetic process 4.0% (2/50) 5.39 0.001051 0.009363
GO:0006807 nitrogen compound metabolic process 12.0% (6/50) 2.25 0.001555 0.009525
GO:0016053 organic acid biosynthetic process 4.0% (2/50) 5.25 0.001264 0.00953
GO:0009349 riboflavin synthase complex 2.0% (1/50) 9.34 0.00154 0.010064
GO:0004358 glutamate N-acetyltransferase activity 2.0% (1/50) 9.34 0.00154 0.010064
GO:0006520 cellular amino acid metabolic process 4.0% (2/50) 4.82 0.002305 0.011889
GO:0042726 flavin-containing compound metabolic process 2.0% (1/50) 8.34 0.003079 0.012068
GO:0042727 flavin-containing compound biosynthetic process 2.0% (1/50) 8.34 0.003079 0.012068
GO:0000105 histidine biosynthetic process 2.0% (1/50) 8.34 0.003079 0.012068
GO:0006771 riboflavin metabolic process 2.0% (1/50) 8.34 0.003079 0.012068
GO:0006547 histidine metabolic process 2.0% (1/50) 8.34 0.003079 0.012068
GO:0009231 riboflavin biosynthetic process 2.0% (1/50) 8.34 0.003079 0.012068
GO:0044271 cellular nitrogen compound biosynthetic process 8.0% (4/50) 2.86 0.002247 0.012234
GO:0009987 cellular process 14.0% (7/50) 1.94 0.002183 0.012587
GO:0008150 biological_process 14.0% (7/50) 1.63 0.006925 0.014752
GO:0043603 cellular amide metabolic process 6.0% (3/50) 2.96 0.006777 0.01476
GO:0006518 peptide metabolic process 6.0% (3/50) 2.96 0.006777 0.01476
GO:0006082 organic acid metabolic process 4.0% (2/50) 3.98 0.00714 0.014887
GO:0005198 structural molecule activity 6.0% (3/50) 2.92 0.007388 0.015084
GO:0019752 carboxylic acid metabolic process 4.0% (2/50) 4.04 0.006643 0.01514
GO:0043436 oxoacid metabolic process 4.0% (2/50) 4.04 0.006643 0.01514
GO:0003735 structural constituent of ribosome 6.0% (3/50) 2.97 0.00663 0.015846
GO:0043228 non-membrane-bounded organelle 6.0% (3/50) 2.98 0.006556 0.016063
GO:0043232 intracellular non-membrane-bounded organelle 6.0% (3/50) 2.98 0.006556 0.016063
GO:0006525 arginine metabolic process 2.0% (1/50) 7.76 0.004614 0.016748
GO:0006526 arginine biosynthetic process 2.0% (1/50) 7.76 0.004614 0.016748
GO:0034641 cellular nitrogen compound metabolic process 8.0% (4/50) 2.43 0.006499 0.01676
GO:0043043 peptide biosynthetic process 6.0% (3/50) 2.98 0.006484 0.017173
GO:0043604 amide biosynthetic process 6.0% (3/50) 2.98 0.006484 0.017173
GO:0006412 translation 6.0% (3/50) 2.98 0.006484 0.017173
GO:0006767 water-soluble vitamin metabolic process 2.0% (1/50) 7.34 0.006148 0.01772
GO:0006766 vitamin metabolic process 2.0% (1/50) 7.34 0.006148 0.01772
GO:0042364 water-soluble vitamin biosynthetic process 2.0% (1/50) 7.34 0.006148 0.01772
GO:0004751 ribose-5-phosphate isomerase activity 2.0% (1/50) 7.34 0.006148 0.01772
GO:0009052 pentose-phosphate shunt, non-oxidative branch 2.0% (1/50) 7.34 0.006148 0.01772
GO:0009110 vitamin biosynthetic process 2.0% (1/50) 7.34 0.006148 0.01772
GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses 2.0% (1/50) 6.76 0.009208 0.018416
GO:0005840 ribosome 6.0% (3/50) 3.05 0.005716 0.020007
GO:0005622 intracellular anatomical structure 6.0% (3/50) 2.68 0.011526 0.021722
GO:0043226 organelle 6.0% (3/50) 2.68 0.011424 0.021952
GO:0043229 intracellular organelle 6.0% (3/50) 2.69 0.011223 0.021997
GO:0009064 glutamine family amino acid metabolic process 2.0% (1/50) 6.34 0.012259 0.022247
GO:0009084 glutamine family amino acid biosynthetic process 2.0% (1/50) 6.34 0.012259 0.022247
GO:0044238 primary metabolic process 10.0% (5/50) 1.84 0.012759 0.022734
GO:0016860 intramolecular oxidoreductase activity 2.0% (1/50) 6.17 0.013781 0.024116
GO:0015036 disulfide oxidoreductase activity 2.0% (1/50) 6.02 0.0153 0.025414
GO:0015035 protein disulfide oxidoreductase activity 2.0% (1/50) 6.02 0.0153 0.025414
GO:0034645 cellular macromolecule biosynthetic process 6.0% (3/50) 2.54 0.014935 0.025677
GO:0009059 macromolecule biosynthetic process 6.0% (3/50) 2.51 0.015775 0.025766
GO:0019843 rRNA binding 2.0% (1/50) 5.76 0.018333 0.028977
GO:1990234 transferase complex 2.0% (1/50) 5.76 0.018333 0.028977
GO:1901607 alpha-amino acid biosynthetic process 2.0% (1/50) 5.64 0.019845 0.030871
GO:0016407 acetyltransferase activity 2.0% (1/50) 5.54 0.021356 0.032198
GO:0008080 N-acetyltransferase activity 2.0% (1/50) 5.54 0.021356 0.032198
GO:0016410 N-acyltransferase activity 2.0% (1/50) 5.44 0.022864 0.03395
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors 2.0% (1/50) 5.34 0.02437 0.035646
GO:0005575 cellular_component 8.0% (4/50) 1.81 0.026763 0.038571
GO:1901605 alpha-amino acid metabolic process 2.0% (1/50) 5.02 0.030371 0.043136
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_57 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_104 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_184 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_243 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_31 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_71 0.049 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_116 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_130 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_234 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_4 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_22 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_34 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_137 0.029 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_167 0.04 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_38 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_130 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_27 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_238 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_11 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_35 0.039 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_37 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_53 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_143 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_169 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_47 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_106 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_159 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_184 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_186 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_193 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_322 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_349 0.044 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_2 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_221 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_266 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_69 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_190 0.042 Archaeplastida Compare
Picea abies HCCA Cluster_250 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_301 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_340 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_14 0.048 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_115 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_237 0.048 Archaeplastida Compare
Vitis vinifera HCCA Cluster_39 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_158 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_20 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_49 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_55 0.033 Archaeplastida Compare
Zea mays HCCA Cluster_160 0.043 Archaeplastida Compare
Zea mays HCCA Cluster_226 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_256 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_302 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_320 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_57 0.019 LandPlants Compare
Amborella trichopoda HCCA Cluster_84 0.016 LandPlants Compare
Amborella trichopoda HCCA Cluster_104 0.025 LandPlants Compare
Amborella trichopoda HCCA Cluster_105 0.017 LandPlants Compare
Amborella trichopoda HCCA Cluster_184 0.019 LandPlants Compare
Amborella trichopoda HCCA Cluster_241 0.017 LandPlants Compare
Amborella trichopoda HCCA Cluster_243 0.022 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_31 0.021 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_55 0.016 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_71 0.049 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_116 0.02 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_130 0.03 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_141 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_232 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_234 0.019 LandPlants Compare
Gingko biloba HCCA Cluster_27 0.021 LandPlants Compare
Gingko biloba HCCA Cluster_64 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_238 0.02 LandPlants Compare
Gingko biloba HCCA Cluster_251 0.018 LandPlants Compare
Marchantia polymorpha HCCA Cluster_11 0.021 LandPlants Compare
Marchantia polymorpha HCCA Cluster_35 0.038 LandPlants Compare
Marchantia polymorpha HCCA Cluster_37 0.019 LandPlants Compare
Marchantia polymorpha HCCA Cluster_53 0.019 LandPlants Compare
Marchantia polymorpha HCCA Cluster_92 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_143 0.019 LandPlants Compare
Marchantia polymorpha HCCA Cluster_159 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_47 0.019 LandPlants Compare
Oryza sativa HCCA Cluster_82 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_97 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_106 0.019 LandPlants Compare
Oryza sativa HCCA Cluster_159 0.019 LandPlants Compare
Oryza sativa HCCA Cluster_184 0.02 LandPlants Compare
Oryza sativa HCCA Cluster_186 0.029 LandPlants Compare
Oryza sativa HCCA Cluster_197 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_322 0.023 LandPlants Compare
Oryza sativa HCCA Cluster_328 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_349 0.032 LandPlants Compare
Physcomitrella patens HCCA Cluster_2 0.024 LandPlants Compare
Physcomitrella patens HCCA Cluster_229 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_266 0.02 LandPlants Compare
Picea abies HCCA Cluster_69 0.017 LandPlants Compare
Picea abies HCCA Cluster_190 0.04 LandPlants Compare
Picea abies HCCA Cluster_250 0.022 LandPlants Compare
Picea abies HCCA Cluster_301 0.017 LandPlants Compare
Picea abies HCCA Cluster_340 0.027 LandPlants Compare
Solanum lycopersicum HCCA Cluster_14 0.041 LandPlants Compare
Solanum lycopersicum HCCA Cluster_115 0.027 LandPlants Compare
Solanum lycopersicum HCCA Cluster_135 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_158 0.018 LandPlants Compare
Solanum lycopersicum HCCA Cluster_170 0.018 LandPlants Compare
Solanum lycopersicum HCCA Cluster_237 0.039 LandPlants Compare
Solanum lycopersicum HCCA Cluster_263 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_13 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_39 0.017 LandPlants Compare
Vitis vinifera HCCA Cluster_93 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_130 0.017 LandPlants Compare
Vitis vinifera HCCA Cluster_158 0.02 LandPlants Compare
Zea mays HCCA Cluster_14 0.018 LandPlants Compare
Zea mays HCCA Cluster_20 0.02 LandPlants Compare
Zea mays HCCA Cluster_49 0.023 LandPlants Compare
Zea mays HCCA Cluster_55 0.021 LandPlants Compare
Zea mays HCCA Cluster_160 0.043 LandPlants Compare
Zea mays HCCA Cluster_226 0.027 LandPlants Compare
Zea mays HCCA Cluster_256 0.019 LandPlants Compare
Zea mays HCCA Cluster_302 0.022 LandPlants Compare
Zea mays HCCA Cluster_320 0.028 LandPlants Compare
Zea mays HCCA Cluster_341 0.017 LandPlants Compare
Sequences (50) (download table)

InterPro Domains

GO Terms

Family Terms