Coexpression cluster: Cluster_110 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0010262 somatic embryogenesis 5.56% (4/72) 7.25 0.0 4e-06
GO:0051173 positive regulation of nitrogen compound metabolic process 11.11% (8/72) 2.62 4.7e-05 0.001525
GO:2001141 regulation of RNA biosynthetic process 22.22% (16/72) 1.63 4.1e-05 0.001554
GO:0006355 regulation of transcription, DNA-templated 22.22% (16/72) 1.63 4.1e-05 0.001554
GO:1903506 regulation of nucleic acid-templated transcription 22.22% (16/72) 1.63 4.1e-05 0.001554
GO:0010604 positive regulation of macromolecule metabolic process 11.11% (8/72) 2.6 5.2e-05 0.001571
GO:0051252 regulation of RNA metabolic process 22.22% (16/72) 1.62 4.5e-05 0.001572
GO:0031325 positive regulation of cellular metabolic process 11.11% (8/72) 2.58 5.7e-05 0.001622
GO:0019219 regulation of nucleobase-containing compound metabolic process 22.22% (16/72) 1.54 8.5e-05 0.002037
GO:0031328 positive regulation of cellular biosynthetic process 11.11% (8/72) 2.65 4.1e-05 0.002055
GO:0010557 positive regulation of macromolecule biosynthetic process 11.11% (8/72) 2.67 3.7e-05 0.002086
GO:0010556 regulation of macromolecule biosynthetic process 22.22% (16/72) 1.55 8.2e-05 0.00209
GO:2000112 regulation of cellular macromolecule biosynthetic process 22.22% (16/72) 1.55 8.2e-05 0.00209
GO:0003700 DNA-binding transcription factor activity 19.44% (14/72) 1.68 9.6e-05 0.002192
GO:0051254 positive regulation of RNA metabolic process 11.11% (8/72) 2.75 2.5e-05 0.002245
GO:1903508 positive regulation of nucleic acid-templated transcription 11.11% (8/72) 2.75 2.5e-05 0.002245
GO:1902680 positive regulation of RNA biosynthetic process 11.11% (8/72) 2.75 2.5e-05 0.002245
GO:0045893 positive regulation of transcription, DNA-templated 11.11% (8/72) 2.75 2.5e-05 0.002245
GO:0010628 positive regulation of gene expression 11.11% (8/72) 2.68 3.5e-05 0.002281
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 11.11% (8/72) 2.71 3e-05 0.002289
GO:0140110 transcription regulator activity 19.44% (14/72) 1.65 0.000113 0.002334
GO:0031326 regulation of cellular biosynthetic process 22.22% (16/72) 1.51 0.000108 0.002341
GO:0009891 positive regulation of biosynthetic process 11.11% (8/72) 2.37 0.000153 0.003024
GO:0010468 regulation of gene expression 22.22% (16/72) 1.46 0.000162 0.003078
GO:0009889 regulation of biosynthetic process 22.22% (16/72) 1.44 0.000191 0.003487
GO:0009893 positive regulation of metabolic process 11.11% (8/72) 2.29 0.000228 0.003857
GO:0051171 regulation of nitrogen compound metabolic process 22.22% (16/72) 1.42 0.00022 0.003865
GO:0060255 regulation of macromolecule metabolic process 22.22% (16/72) 1.34 0.000413 0.006726
GO:0009790 embryo development 9.72% (7/72) 2.33 0.000476 0.006777
GO:0009793 embryo development ending in seed dormancy 9.72% (7/72) 2.33 0.000476 0.006777
GO:0080090 regulation of primary metabolic process 22.22% (16/72) 1.33 0.000443 0.00696
GO:0016101 diterpenoid metabolic process 4.17% (3/72) 4.25 0.000536 0.006979
GO:0016602 CCAAT-binding factor complex 2.78% (2/72) 5.87 0.000522 0.007
GO:0009685 gibberellin metabolic process 4.17% (3/72) 4.32 0.000461 0.007002
GO:0031323 regulation of cellular metabolic process 22.22% (16/72) 1.32 0.000508 0.007013
GO:0009785 blue light signaling pathway 2.78% (2/72) 5.57 0.000799 0.009846
GO:0030522 intracellular receptor signaling pathway 2.78% (2/72) 5.57 0.000799 0.009846
GO:0048522 positive regulation of cellular process 11.11% (8/72) 1.99 0.000893 0.010717
GO:0071483 cellular response to blue light 2.78% (2/72) 5.18 0.001386 0.016209
GO:0090575 RNA polymerase II transcription factor complex 2.78% (2/72) 5.11 0.001522 0.017354
GO:0019222 regulation of metabolic process 22.22% (16/72) 1.15 0.001689 0.018339
GO:0044798 nuclear transcription factor complex 2.78% (2/72) 5.05 0.001664 0.018512
GO:0005667 transcription factor complex 2.78% (2/72) 4.99 0.001813 0.019223
GO:0007275 multicellular organism development 11.11% (8/72) 1.8 0.002058 0.021327
GO:0097577 sequestering of iron ion 1.39% (1/72) 8.57 0.002629 0.023981
GO:0006880 intracellular sequestering of iron ion 1.39% (1/72) 8.57 0.002629 0.023981
GO:0060867 fruit abscission 1.39% (1/72) 8.57 0.002629 0.023981
GO:0010081 regulation of inflorescence meristem growth 1.39% (1/72) 8.57 0.002629 0.023981
GO:0001076 obsolete transcription factor activity, RNA polymerase II transcription factor binding 1.39% (1/72) 8.57 0.002629 0.023981
GO:0009738 abscisic acid-activated signaling pathway 5.56% (4/72) 2.84 0.002423 0.02455
GO:0003677 DNA binding 13.89% (10/72) 1.49 0.002836 0.025354
GO:0051235 maintenance of location 4.17% (3/72) 3.31 0.003486 0.029995
GO:0003676 nucleic acid binding 18.06% (13/72) 1.21 0.003444 0.030199
GO:0048518 positive regulation of biological process 11.11% (8/72) 1.62 0.004344 0.036686
GO:0060860 regulation of floral organ abscission 1.39% (1/72) 7.57 0.005252 0.039916
GO:0060862 negative regulation of floral organ abscission 1.39% (1/72) 7.57 0.005252 0.039916
GO:0010080 regulation of floral meristem growth 1.39% (1/72) 7.57 0.005252 0.039916
GO:2000692 negative regulation of seed maturation 1.39% (1/72) 7.57 0.005252 0.039916
GO:0033613 activating transcription factor binding 1.39% (1/72) 7.57 0.005252 0.039916
GO:0016752 sinapoyltransferase activity 1.39% (1/72) 7.57 0.005252 0.039916
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_11 0.032 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_23 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_24 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_25 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_29 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_35 0.035 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_41 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_52 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_54 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_57 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_62 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_65 0.032 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_74 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_81 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_90 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_91 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_104 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_106 0.039 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_107 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_113 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_117 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_121 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_136 0.034 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_147 0.044 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_148 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_154 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_162 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_163 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_169 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_170 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_173 0.029 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_174 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_183 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_196 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_207 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_222 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_258 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_273 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_174 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_19 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_42 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_44 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_54 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_96 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_127 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_175 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_197 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_206 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_207 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_260 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_313 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_446 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_78 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_90 0.023 Gene family Compare
Picea abies HCCA cluster Cluster_91 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_104 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_107 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_135 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_216 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_359 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_365 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_377 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_398 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_427 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_742 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_27 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_39 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_129 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_143 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_150 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_187 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_8 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_12 0.031 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_49 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_89 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_95 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_101 0.032 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_102 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_111 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_112 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_114 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_133 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_134 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_135 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_158 0.022 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_159 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_161 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_174 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_176 0.044 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_181 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_190 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_193 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_216 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_242 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_264 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_284 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_292 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_299 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_311 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_1 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_5 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_9 0.038 Gene family Compare
Vitis vinifera HCCA cluster Cluster_21 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_23 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_51 0.028 Gene family Compare
Vitis vinifera HCCA cluster Cluster_65 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_71 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_89 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_94 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_97 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_111 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_112 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_118 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_130 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_150 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_151 0.027 Gene family Compare
Vitis vinifera HCCA cluster Cluster_153 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_179 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_183 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_192 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_202 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_214 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_216 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_247 0.029 Gene family Compare
Vitis vinifera HCCA cluster Cluster_285 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_46 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_56 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_64 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_131 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_197 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_210 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_255 0.025 Gene family Compare
Zea mays HCCA cluster Cluster_260 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_284 0.026 Gene family Compare
Sequences (72) (download table)

InterPro Domains

GO Terms

Family Terms