Coexpression cluster: Cluster_285 (HCCA cluster)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016874 ligase activity 5.22% (6/115) 4.45 0.0 0.000101
GO:0043038 amino acid activation 3.48% (4/115) 4.96 8e-06 0.000205
GO:0043039 tRNA aminoacylation 3.48% (4/115) 4.96 8e-06 0.000205
GO:0016875 ligase activity, forming carbon-oxygen bonds 3.48% (4/115) 5.0 8e-06 0.000221
GO:0004812 aminoacyl-tRNA ligase activity 3.48% (4/115) 5.0 8e-06 0.000221
GO:0006139 nucleobase-containing compound metabolic process 9.57% (11/115) 2.36 1.1e-05 0.000236
GO:1901360 organic cyclic compound metabolic process 10.43% (12/115) 2.32 6e-06 0.00027
GO:0090304 nucleic acid metabolic process 8.7% (10/115) 2.6 7e-06 0.000271
GO:0005488 binding 37.39% (43/115) 0.93 8e-06 0.000274
GO:0016070 RNA metabolic process 7.83% (9/115) 2.84 5e-06 0.000298
GO:0006725 cellular aromatic compound metabolic process 10.43% (12/115) 2.35 4e-06 0.000315
GO:0006418 tRNA aminoacylation for protein translation 3.48% (4/115) 5.2 4e-06 0.000413
GO:0006520 cellular amino acid metabolic process 4.35% (5/115) 3.88 2.4e-05 0.000502
GO:0046483 heterocycle metabolic process 10.43% (12/115) 2.36 4e-06 0.000595
GO:0034641 cellular nitrogen compound metabolic process 11.3% (13/115) 1.94 3.5e-05 0.000687
GO:0140101 catalytic activity, acting on a tRNA 3.48% (4/115) 4.24 6.1e-05 0.001112
GO:0005634 nucleus 6.09% (7/115) 2.82 6.6e-05 0.001126
GO:0140098 catalytic activity, acting on RNA 5.22% (6/115) 3.06 8.9e-05 0.001436
GO:0005515 protein binding 15.65% (18/115) 1.44 0.000102 0.001562
GO:0003674 molecular_function 51.3% (59/115) 0.57 0.000152 0.002213
GO:0004386 helicase activity 2.61% (3/115) 4.66 0.00023 0.003191
GO:0003723 RNA binding 5.22% (6/115) 2.75 0.000289 0.003818
GO:0043227 membrane-bounded organelle 6.09% (7/115) 2.42 0.000364 0.004414
GO:0043231 intracellular membrane-bounded organelle 6.09% (7/115) 2.42 0.000364 0.004414
GO:0003676 nucleic acid binding 13.04% (15/115) 1.43 0.000449 0.005222
GO:0006399 tRNA metabolic process 3.48% (4/115) 3.46 0.000495 0.005536
GO:0006082 organic acid metabolic process 4.35% (5/115) 2.69 0.001119 0.010854
GO:0043436 oxoacid metabolic process 4.35% (5/115) 2.7 0.001098 0.011018
GO:0019752 carboxylic acid metabolic process 4.35% (5/115) 2.7 0.001098 0.011018
GO:0034660 ncRNA metabolic process 3.48% (4/115) 3.18 0.001036 0.011161
GO:0044281 small molecule metabolic process 5.22% (6/115) 2.29 0.00152 0.014272
GO:0018130 heterocycle biosynthetic process 4.35% (5/115) 2.51 0.001928 0.017003
GO:0019438 aromatic compound biosynthetic process 4.35% (5/115) 2.51 0.001928 0.017003
GO:1901362 organic cyclic compound biosynthetic process 4.35% (5/115) 2.38 0.002841 0.022965
GO:0017070 U6 snRNA binding 0.87% (1/115) 8.24 0.003297 0.023401
GO:0017069 snRNA binding 0.87% (1/115) 8.24 0.003297 0.023401
GO:0004057 arginyltransferase activity 0.87% (1/115) 8.24 0.003297 0.023401
GO:0016598 protein arginylation 0.87% (1/115) 8.24 0.003297 0.023401
GO:0031023 microtubule organizing center organization 0.87% (1/115) 8.24 0.003297 0.023401
GO:0043226 organelle 6.96% (8/115) 1.74 0.002826 0.023499
GO:0043229 intracellular organelle 6.96% (8/115) 1.74 0.002826 0.023499
GO:0044424 intracellular part 9.57% (11/115) 1.34 0.004276 0.029627
GO:0006807 nitrogen compound metabolic process 14.78% (17/115) 0.99 0.004868 0.032946
GO:0004019 adenylosuccinate synthase activity 0.87% (1/115) 7.24 0.006583 0.040761
GO:0004003 ATP-dependent DNA helicase activity 0.87% (1/115) 7.24 0.006583 0.040761
GO:0044464 cell part 9.57% (11/115) 1.26 0.006347 0.041043
GO:0034654 nucleobase-containing compound biosynthetic process 3.48% (4/115) 2.46 0.006269 0.041464
GO:0006397 mRNA processing 1.74% (2/115) 3.96 0.007374 0.044706
GO:0032774 RNA biosynthetic process 2.61% (3/115) 2.86 0.008288 0.04922
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_6 0.03 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_8 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_9 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_28 0.046 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_48 0.039 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_61 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_93 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_101 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_103 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_150 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_156 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_171 0.023 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_176 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_187 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_217 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_228 0.031 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_229 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_236 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_272 0.02 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_130 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_199 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_6 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_7 0.021 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_38 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_40 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_64 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_99 0.026 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_165 0.025 Gene family Compare
Oryza sativa HCCA cluster Cluster_2 0.033 Gene family Compare
Oryza sativa HCCA cluster Cluster_26 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.04 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_148 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_174 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_189 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_228 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_236 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_273 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_283 0.051 Gene family Compare
Oryza sativa HCCA cluster Cluster_284 0.036 Gene family Compare
Oryza sativa HCCA cluster Cluster_317 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_323 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_57 0.023 Gene family Compare
Picea abies HCCA cluster Cluster_68 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_69 0.029 Gene family Compare
Picea abies HCCA cluster Cluster_114 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_209 0.027 Gene family Compare
Picea abies HCCA cluster Cluster_229 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_247 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_252 0.023 Gene family Compare
Picea abies HCCA cluster Cluster_339 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_362 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_395 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_397 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_399 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_434 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_439 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_462 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_497 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_64 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_66 0.026 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_102 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_104 0.046 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_106 0.02 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_140 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_172 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_189 0.026 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_197 0.029 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_37 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_115 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_217 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_270 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_275 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_16 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_72 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_82 0.06 Gene family Compare
Vitis vinifera HCCA cluster Cluster_85 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_96 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_99 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_121 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_128 0.034 Gene family Compare
Vitis vinifera HCCA cluster Cluster_135 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_136 0.034 Gene family Compare
Vitis vinifera HCCA cluster Cluster_165 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_171 0.028 Gene family Compare
Vitis vinifera HCCA cluster Cluster_172 0.026 Gene family Compare
Vitis vinifera HCCA cluster Cluster_195 0.031 Gene family Compare
Vitis vinifera HCCA cluster Cluster_197 0.029 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.044 Gene family Compare
Vitis vinifera HCCA cluster Cluster_216 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_220 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_224 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_226 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_228 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_16 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_86 0.047 Gene family Compare
Zea mays HCCA cluster Cluster_110 0.033 Gene family Compare
Zea mays HCCA cluster Cluster_120 0.048 Gene family Compare
Zea mays HCCA cluster Cluster_139 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.044 Gene family Compare
Zea mays HCCA cluster Cluster_168 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_178 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_185 0.033 Gene family Compare
Zea mays HCCA cluster Cluster_186 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_189 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_191 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_221 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_271 0.034 Gene family Compare
Zea mays HCCA cluster Cluster_281 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_286 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_307 0.026 Gene family Compare
Zea mays HCCA cluster Cluster_326 0.027 Gene family Compare
Zea mays HCCA cluster Cluster_341 0.022 Gene family Compare
Sequences (115) (download table)

InterPro Domains

GO Terms

Family Terms