Coexpression cluster: Cluster_4 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0031334 positive regulation of protein-containing complex assembly 1.27% (1/79) 8.68 0.002434 0.010412
GO:0010638 positive regulation of organelle organization 1.27% (1/79) 8.68 0.002434 0.010412
GO:0015629 actin cytoskeleton 1.27% (1/79) 8.68 0.002434 0.010412
GO:0051495 positive regulation of cytoskeleton organization 1.27% (1/79) 8.68 0.002434 0.010412
GO:0030838 positive regulation of actin filament polymerization 1.27% (1/79) 8.68 0.002434 0.010412
GO:0032273 positive regulation of protein polymerization 1.27% (1/79) 8.68 0.002434 0.010412
GO:0051130 positive regulation of cellular component organization 1.27% (1/79) 8.68 0.002434 0.010412
GO:0034314 Arp2/3 complex-mediated actin nucleation 1.27% (1/79) 8.68 0.002434 0.010412
GO:0044089 positive regulation of cellular component biogenesis 1.27% (1/79) 8.68 0.002434 0.010412
GO:0097435 supramolecular fiber organization 1.27% (1/79) 8.68 0.002434 0.010412
GO:0045010 actin nucleation 1.27% (1/79) 8.68 0.002434 0.010412
GO:0000818 nuclear MIS12/MIND complex 1.27% (1/79) 8.68 0.002434 0.010412
GO:0007015 actin filament organization 1.27% (1/79) 8.68 0.002434 0.010412
GO:0005885 Arp2/3 protein complex 1.27% (1/79) 8.68 0.002434 0.010412
GO:0005856 cytoskeleton 1.27% (1/79) 8.68 0.002434 0.010412
GO:1902905 positive regulation of supramolecular fiber organization 1.27% (1/79) 8.68 0.002434 0.010412
GO:0000444 MIS12/MIND type complex 1.27% (1/79) 8.68 0.002434 0.010412
GO:0072546 EMC complex 1.27% (1/79) 8.68 0.002434 0.010412
GO:0110053 regulation of actin filament organization 1.27% (1/79) 7.1 0.007284 0.016997
GO:0043254 regulation of protein-containing complex assembly 1.27% (1/79) 7.1 0.007284 0.016997
GO:0044087 regulation of cellular component biogenesis 1.27% (1/79) 7.1 0.007284 0.016997
GO:0032970 regulation of actin filament-based process 1.27% (1/79) 7.1 0.007284 0.016997
GO:0032956 regulation of actin cytoskeleton organization 1.27% (1/79) 7.1 0.007284 0.016997
GO:0032535 regulation of cellular component size 1.27% (1/79) 7.1 0.007284 0.016997
GO:0090066 regulation of anatomical structure size 1.27% (1/79) 7.1 0.007284 0.016997
GO:0030832 regulation of actin filament length 1.27% (1/79) 7.1 0.007284 0.016997
GO:0030833 regulation of actin filament polymerization 1.27% (1/79) 7.1 0.007284 0.016997
GO:1902903 regulation of supramolecular fiber organization 1.27% (1/79) 7.1 0.007284 0.016997
GO:0008064 regulation of actin polymerization or depolymerization 1.27% (1/79) 7.1 0.007284 0.016997
GO:0051493 regulation of cytoskeleton organization 1.27% (1/79) 7.1 0.007284 0.016997
GO:0032271 regulation of protein polymerization 1.27% (1/79) 7.1 0.007284 0.016997
GO:0048522 positive regulation of cellular process 1.27% (1/79) 7.68 0.004862 0.018719
GO:0048518 positive regulation of biological process 1.27% (1/79) 7.68 0.004862 0.018719
GO:0051128 regulation of cellular component organization 1.27% (1/79) 6.36 0.012111 0.026645
GO:0033043 regulation of organelle organization 1.27% (1/79) 6.36 0.012111 0.026645
GO:0032991 protein-containing complex 3.8% (3/79) 2.48 0.016855 0.03605
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_192 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_288 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_253 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_379 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_402 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_304 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_192 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_69 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_161 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_288 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_320 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_350 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_174 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_176 0.015 LandPlants Compare
Picea abies HCCA Cluster_402 0.02 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_195 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_190 0.014 LandPlants Compare
Sequences (79) (download table)

InterPro Domains

GO Terms

Family Terms