Coexpression cluster: Cluster_15 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901566 organonitrogen compound biosynthetic process 15.74% (17/108) 2.74 0.0 0.0
GO:0009058 biosynthetic process 18.52% (20/108) 2.47 0.0 0.0
GO:1901576 organic substance biosynthetic process 17.59% (19/108) 2.48 0.0 0.0
GO:0044237 cellular metabolic process 23.15% (25/108) 1.98 0.0 0.0
GO:0005575 cellular_component 23.15% (25/108) 1.98 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 17.59% (19/108) 2.43 0.0 0.0
GO:0044249 cellular biosynthetic process 17.59% (19/108) 2.56 0.0 0.0
GO:0009987 cellular process 27.78% (30/108) 1.7 0.0 0.0
GO:0008152 metabolic process 26.85% (29/108) 1.74 0.0 0.0
GO:0043603 amide metabolic process 13.89% (15/108) 2.8 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 14.81% (16/108) 2.6 0.0 0.0
GO:0008150 biological_process 32.41% (35/108) 1.42 0.0 1e-06
GO:0006518 peptide metabolic process 12.96% (14/108) 2.73 0.0 1e-06
GO:0071704 organic substance metabolic process 24.07% (26/108) 1.73 0.0 1e-06
GO:1901564 organonitrogen compound metabolic process 19.44% (21/108) 2.02 0.0 1e-06
GO:0034645 cellular macromolecule biosynthetic process 12.96% (14/108) 2.65 0.0 1e-06
GO:0043604 amide biosynthetic process 12.04% (13/108) 2.66 0.0 2e-06
GO:0006807 nitrogen compound metabolic process 20.37% (22/108) 1.85 0.0 2e-06
GO:0003735 structural constituent of ribosome 12.04% (13/108) 2.66 0.0 2e-06
GO:0043043 peptide biosynthetic process 12.04% (13/108) 2.66 0.0 2e-06
GO:0006412 translation 12.04% (13/108) 2.67 0.0 2e-06
GO:0110165 cellular anatomical entity 18.52% (20/108) 1.94 0.0 3e-06
GO:0043226 organelle 12.96% (14/108) 2.49 0.0 3e-06
GO:0005198 structural molecule activity 12.04% (13/108) 2.61 0.0 3e-06
GO:0044238 primary metabolic process 22.22% (24/108) 1.7 0.0 3e-06
GO:0043229 intracellular organelle 12.96% (14/108) 2.49 0.0 3e-06
GO:0009059 macromolecule biosynthetic process 12.96% (14/108) 2.49 0.0 3e-06
GO:0044260 cellular macromolecule metabolic process 12.96% (14/108) 2.4 0.0 5e-06
GO:0005840 ribosome 11.11% (12/108) 2.61 1e-06 7e-06
GO:0043232 intracellular non-membrane-bounded organelle 11.11% (12/108) 2.57 1e-06 9e-06
GO:0043228 non-membrane-bounded organelle 11.11% (12/108) 2.57 1e-06 9e-06
GO:0098800 inner mitochondrial membrane protein complex 4.63% (5/108) 4.52 3e-06 2.8e-05
GO:0098798 mitochondrial protein-containing complex 4.63% (5/108) 4.42 4e-06 3.8e-05
GO:0003674 molecular_function 40.74% (44/108) 0.92 5e-06 4.2e-05
GO:0006458 'de novo' protein folding 1.85% (2/108) 8.65 1e-05 8.5e-05
GO:0019637 organophosphate metabolic process 5.56% (6/108) 3.5 1.7e-05 0.000138
GO:0098796 membrane protein complex 5.56% (6/108) 3.44 2.1e-05 0.000169
GO:0072521 purine-containing compound metabolic process 4.63% (5/108) 3.68 5e-05 0.000372
GO:0006163 purine nucleotide metabolic process 4.63% (5/108) 3.68 4.9e-05 0.000374
GO:0009117 nucleotide metabolic process 4.63% (5/108) 3.6 6.4e-05 0.000467
GO:0006753 nucleoside phosphate metabolic process 4.63% (5/108) 3.58 7e-05 0.000495
GO:0055086 nucleobase-containing small molecule metabolic process 4.63% (5/108) 3.52 8.3e-05 0.00058
GO:0019538 protein metabolic process 12.96% (14/108) 1.71 9.8e-05 0.000651
GO:0043170 macromolecule metabolic process 14.81% (16/108) 1.56 9.8e-05 0.000662
GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) 2.78% (3/108) 5.08 0.000103 0.00067
GO:1901135 carbohydrate derivative metabolic process 4.63% (5/108) 3.43 0.000112 0.000709
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 2.78% (3/108) 5.01 0.000118 0.000735
GO:0046034 ATP metabolic process 3.7% (4/108) 3.79 0.000218 0.001223
GO:0009205 purine ribonucleoside triphosphate metabolic process 3.7% (4/108) 3.79 0.000218 0.001223
GO:0009199 ribonucleoside triphosphate metabolic process 3.7% (4/108) 3.79 0.000218 0.001223
GO:0009144 purine nucleoside triphosphate metabolic process 3.7% (4/108) 3.79 0.000218 0.001223
GO:0044281 small molecule metabolic process 6.48% (7/108) 2.56 0.000206 0.001253
GO:0009141 nucleoside triphosphate metabolic process 3.7% (4/108) 3.75 0.00024 0.001322
GO:0090407 organophosphate biosynthetic process 3.7% (4/108) 3.63 0.000332 0.001793
GO:0009150 purine ribonucleotide metabolic process 3.7% (4/108) 3.52 0.000446 0.002245
GO:0009259 ribonucleotide metabolic process 3.7% (4/108) 3.52 0.000446 0.002245
GO:0019693 ribose phosphate metabolic process 3.7% (4/108) 3.52 0.000446 0.002245
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 2.78% (3/108) 4.39 0.000424 0.002252
GO:0046483 heterocycle metabolic process 6.48% (7/108) 2.26 0.000702 0.003153
GO:0009201 ribonucleoside triphosphate biosynthetic process 2.78% (3/108) 4.14 0.000694 0.003167
GO:0009145 purine nucleoside triphosphate biosynthetic process 2.78% (3/108) 4.14 0.000694 0.003167
GO:0006754 ATP biosynthetic process 2.78% (3/108) 4.14 0.000694 0.003167
GO:0009142 nucleoside triphosphate biosynthetic process 2.78% (3/108) 4.14 0.000694 0.003167
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 2.78% (3/108) 4.14 0.000694 0.003167
GO:0015986 proton motive force-driven ATP synthesis 2.78% (3/108) 4.15 0.000684 0.003387
GO:1901360 organic cyclic compound metabolic process 6.48% (7/108) 2.2 0.000899 0.003979
GO:0046390 ribose phosphate biosynthetic process 2.78% (3/108) 3.99 0.000943 0.003992
GO:0009152 purine ribonucleotide biosynthetic process 2.78% (3/108) 3.99 0.000943 0.003992
GO:0009260 ribonucleotide biosynthetic process 2.78% (3/108) 3.99 0.000943 0.003992
GO:0045275 respiratory chain complex III 1.85% (2/108) 5.24 0.001328 0.005238
GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c 1.85% (2/108) 5.24 0.001328 0.005238
GO:0005750 mitochondrial respiratory chain complex III 1.85% (2/108) 5.24 0.001328 0.005238
GO:0006164 purine nucleotide biosynthetic process 2.78% (3/108) 3.83 0.001286 0.005364
GO:0072522 purine-containing compound biosynthetic process 2.78% (3/108) 3.82 0.001315 0.005408
GO:1901293 nucleoside phosphate biosynthetic process 2.78% (3/108) 3.69 0.001698 0.006523
GO:0009165 nucleotide biosynthetic process 2.78% (3/108) 3.69 0.001698 0.006523
GO:1901137 carbohydrate derivative biosynthetic process 2.78% (3/108) 3.68 0.00175 0.006636
GO:0032991 protein-containing complex 5.56% (6/108) 2.22 0.001958 0.007329
GO:1990351 transporter complex 1.85% (2/108) 4.9 0.002114 0.007621
GO:1902495 transmembrane transporter complex 1.85% (2/108) 4.9 0.002114 0.007621
GO:0015078 proton transmembrane transporter activity 2.78% (3/108) 3.59 0.002065 0.007632
GO:0006091 generation of precursor metabolites and energy 2.78% (3/108) 3.51 0.002413 0.008592
GO:0006139 nucleobase-containing compound metabolic process 5.56% (6/108) 2.15 0.00245 0.008618
GO:0005783 endoplasmic reticulum 1.85% (2/108) 4.68 0.002832 0.009845
GO:1990204 oxidoreductase complex 1.85% (2/108) 4.58 0.00326 0.010941
GO:0097159 organic cyclic compound binding 15.74% (17/108) 1.05 0.00324 0.011001
GO:1901363 heterocyclic compound binding 15.74% (17/108) 1.05 0.00324 0.011001
GO:0006725 cellular aromatic compound metabolic process 5.56% (6/108) 2.02 0.00385 0.012776
GO:0009060 aerobic respiration 1.85% (2/108) 4.32 0.004636 0.014876
GO:0045333 cellular respiration 1.85% (2/108) 4.32 0.004636 0.014876
GO:0019646 aerobic electron transport chain 1.85% (2/108) 4.33 0.004562 0.014967
GO:0022904 respiratory electron transport chain 1.85% (2/108) 4.21 0.005328 0.016912
GO:0070069 cytochrome complex 1.85% (2/108) 4.19 0.005488 0.017232
GO:0022900 electron transport chain 1.85% (2/108) 4.11 0.00615 0.019104
GO:0098803 respiratory chain complex 1.85% (2/108) 4.08 0.006407 0.019693
GO:0003746 translation elongation factor activity 1.85% (2/108) 4.02 0.006935 0.021095
GO:0016491 oxidoreductase activity 6.48% (7/108) 1.64 0.007483 0.022295
GO:0022890 inorganic cation transmembrane transporter activity 2.78% (3/108) 2.93 0.007411 0.022309
GO:0015980 energy derivation by oxidation of organic compounds 1.85% (2/108) 3.95 0.007576 0.022346
GO:0006021 inositol biosynthetic process 0.93% (1/108) 6.91 0.00826 0.023647
GO:0004512 inositol-3-phosphate synthase activity 0.93% (1/108) 6.91 0.00826 0.023647
GO:0008324 monoatomic cation transmembrane transporter activity 2.78% (3/108) 2.88 0.008109 0.02368
GO:0015318 inorganic molecular entity transmembrane transporter activity 2.78% (3/108) 2.83 0.008988 0.02548
GO:0006796 phosphate-containing compound metabolic process 5.56% (6/108) 1.74 0.009491 0.026146
GO:0006793 phosphorus metabolic process 5.56% (6/108) 1.74 0.009491 0.026146
GO:1902494 catalytic complex 2.78% (3/108) 2.8 0.009374 0.026319
GO:0015075 monoatomic ion transmembrane transporter activity 2.78% (3/108) 2.74 0.010484 0.028611
GO:0004455 ketol-acid reductoisomerase activity 0.93% (1/108) 6.54 0.010725 0.028997
GO:0009055 electron transfer activity 1.85% (2/108) 3.65 0.01127 0.030192
GO:0009081 branched-chain amino acid metabolic process 0.93% (1/108) 6.33 0.012365 0.032527
GO:0009082 branched-chain amino acid biosynthetic process 0.93% (1/108) 6.33 0.012365 0.032527
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 1.85% (2/108) 3.57 0.012528 0.032663
GO:0022857 transmembrane transporter activity 4.63% (5/108) 1.86 0.012757 0.032966
GO:0034654 nucleobase-containing compound biosynthetic process 2.78% (3/108) 2.61 0.013342 0.034173
GO:0005215 transporter activity 4.63% (5/108) 1.83 0.013908 0.035315
GO:0004601 peroxidase activity 1.85% (2/108) 3.38 0.015991 0.039909
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor 1.85% (2/108) 3.38 0.015991 0.039909
GO:0000255 allantoin metabolic process 0.93% (1/108) 5.91 0.016453 0.040035
GO:0000256 allantoin catabolic process 0.93% (1/108) 5.91 0.016453 0.040035
GO:0050385 ureidoglycolate lyase activity 0.93% (1/108) 5.91 0.016453 0.040035
GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity 0.93% (1/108) 5.84 0.017268 0.040338
GO:0006098 pentose-phosphate shunt 0.93% (1/108) 5.84 0.017268 0.040338
GO:0006740 NADPH regeneration 0.93% (1/108) 5.84 0.017268 0.040338
GO:0043605 amide catabolic process 0.93% (1/108) 5.84 0.017268 0.040338
GO:0051156 glucose 6-phosphate metabolic process 0.93% (1/108) 5.84 0.017268 0.040338
GO:0046173 polyol biosynthetic process 0.93% (1/108) 5.71 0.018897 0.043793
GO:0019438 aromatic compound biosynthetic process 2.78% (3/108) 2.4 0.019815 0.045559
GO:0018130 heterocycle biosynthetic process 2.78% (3/108) 2.39 0.020116 0.04589
GO:0006020 inositol metabolic process 0.93% (1/108) 5.59 0.020524 0.046099
GO:0051920 peroxiredoxin activity 0.93% (1/108) 5.59 0.020524 0.046099
GO:0005787 signal peptidase complex 0.93% (1/108) 5.54 0.021336 0.046843
GO:0046906 tetrapyrrole binding 2.78% (3/108) 2.36 0.02119 0.046875
GO:0020037 heme binding 2.78% (3/108) 2.36 0.021035 0.046886
GO:0006457 protein folding 1.85% (2/108) 3.13 0.022302 0.048238
GO:0016872 intramolecular lyase activity 0.93% (1/108) 5.48 0.022147 0.048261
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_26 0.016 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_27 0.016 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_101 0.016 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_169 0.019 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_4 0.022 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_70 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_80 0.02 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_88 0.039 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_104 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_129 0.017 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_139 0.018 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_239 0.018 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_279 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_317 0.021 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_321 0.022 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_328 0.022 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_396 0.017 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_31 0.019 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_55 0.016 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_91 0.015 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_51 0.023 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_108 0.017 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_10 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_75 0.017 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_105 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_124 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_162 0.018 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_237 0.02 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_241 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_247 0.018 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_76 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_107 0.018 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_199 0.018 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_46 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_230 0.033 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_132 0.029 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_157 0.015 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_46 0.015 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_112 0.016 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_142 0.018 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_145 0.022 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_156 0.027 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_205 0.02 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_493 0.018 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_95 0.019 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_138 0.018 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_172 0.023 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_176 0.015 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_343 0.019 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_99 0.017 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_102 0.028 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_4 0.019 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_26 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_68 0.022 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_77 0.018 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_160 0.02 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_176 0.016 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_62 0.024 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_31 0.016 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_41 0.017 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_50 0.017 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_55 0.016 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_60 0.015 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_177 0.02 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_14 0.015 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_130 0.018 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_135 0.015 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_60 0.019 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_110 0.017 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_170 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_90 0.017 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_135 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_173 0.021 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_97 0.016 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_108 0.02 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_51 0.015 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_249 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_300 0.047 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_65 0.016 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_145 0.018 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_170 0.019 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_144 0.015 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_150 0.022 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_170 0.016 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_66 0.017 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_101 0.02 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_41 0.016 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_132 0.019 OrthoFinder output from all 47 species Compare
Sequences (108) (download table)

InterPro Domains

GO Terms

Family Terms