Coexpression cluster: Cluster_305 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 40.41% (78/193) 0.91 0.0 1e-06
GO:0005488 binding 26.42% (51/193) 1.14 0.0 6e-06
GO:0003676 nucleic acid binding 12.44% (24/193) 1.87 0.0 6e-06
GO:1901363 heterocyclic compound binding 18.13% (35/193) 1.25 1e-06 9.7e-05
GO:0097159 organic cyclic compound binding 18.13% (35/193) 1.25 1e-06 9.7e-05
GO:0003723 RNA binding 7.25% (14/193) 2.25 2e-06 0.000112
GO:0008380 RNA splicing 1.55% (3/193) 4.96 0.000131 0.006554
GO:0006396 RNA processing 2.59% (5/193) 3.33 0.000156 0.006832
GO:0090079 translation regulator activity, nucleic acid binding 2.59% (5/193) 3.16 0.000268 0.007243
GO:0045182 translation regulator activity 2.59% (5/193) 3.16 0.000268 0.007243
GO:0008135 translation factor activity, RNA binding 2.59% (5/193) 3.16 0.000268 0.007243
GO:0003743 translation initiation factor activity 2.07% (4/193) 3.63 0.000334 0.008369
GO:0008150 biological_process 21.24% (41/193) 0.81 0.000249 0.008733
GO:0009987 cellular process 16.58% (32/193) 0.95 0.000239 0.009336
GO:0008235 metalloexopeptidase activity 1.04% (2/193) 5.7 0.000693 0.016222
GO:0000398 mRNA splicing, via spliceosome 1.04% (2/193) 5.35 0.001119 0.020665
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 1.04% (2/193) 5.35 0.001119 0.020665
GO:0000375 RNA splicing, via transesterification reactions 1.04% (2/193) 5.35 0.001119 0.020665
GO:0044237 cellular metabolic process 11.92% (23/193) 1.03 0.000994 0.021801
GO:0008237 metallopeptidase activity 1.55% (3/193) 3.73 0.001592 0.026602
GO:0043170 macromolecule metabolic process 10.36% (20/193) 1.05 0.001781 0.027187
GO:1990904 ribonucleoprotein complex 1.55% (3/193) 3.74 0.001562 0.027414
GO:0016787 hydrolase activity 6.74% (13/193) 1.37 0.001759 0.028061
GO:0008168 methyltransferase activity 2.07% (4/193) 2.91 0.00209 0.029345
GO:0019888 protein phosphatase regulator activity 1.04% (2/193) 4.91 0.002073 0.030318
GO:0019208 phosphatase regulator activity 1.04% (2/193) 4.75 0.002553 0.030896
GO:0032991 protein-containing complex 4.15% (8/193) 1.8 0.002414 0.031381
GO:0006413 translational initiation 1.55% (3/193) 3.53 0.002331 0.031472
GO:0016741 transferase activity, transferring one-carbon groups 2.07% (4/193) 2.84 0.002541 0.031858
GO:0051649 establishment of localization in cell 2.07% (4/193) 2.77 0.003028 0.033215
GO:0046907 intracellular transport 2.07% (4/193) 2.77 0.003028 0.033215
GO:0030289 protein phosphatase 4 complex 0.52% (1/193) 8.4 0.002961 0.034643
GO:0005737 cytoplasm 1.55% (3/193) 3.22 0.004317 0.045915
GO:0140513 nuclear protein-containing complex 1.55% (3/193) 3.2 0.004484 0.046289
GO:0003924 GTPase activity 2.59% (5/193) 2.22 0.00468 0.046935
GO:0048193 Golgi vesicle transport 1.04% (2/193) 4.27 0.004936 0.048122
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_98 0.022 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_4 0.028 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_130 0.017 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_266 0.018 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_280 0.033 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_144 0.023 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_158 0.015 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_98 0.015 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_104 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_234 0.038 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_291 0.017 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_49 0.016 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_35 0.018 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_38 0.026 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_72 0.026 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_89 0.018 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_100 0.022 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_104 0.018 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_155 0.027 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_165 0.016 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_94 0.038 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_176 0.018 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_77 0.015 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_141 0.016 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_58 0.033 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_22 0.017 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_173 0.018 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_74 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_84 0.023 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_195 0.019 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_303 0.04 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_19 0.017 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_97 0.019 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_269 0.015 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_129 0.022 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_196 0.021 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_67 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_93 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_119 0.02 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_129 0.022 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_138 0.018 OrthoFinder output from all 47 species Compare
Sequences (193) (download table)

InterPro Domains

GO Terms

Family Terms