Coexpression cluster: Cluster_254 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 16.84% (16/95) 1.8 1.3e-05 0.002032
GO:0003743 translation initiation factor activity 3.16% (3/95) 5.46 4.3e-05 0.00347
GO:0008135 translation factor activity, RNA binding 3.16% (3/95) 4.75 0.000194 0.006233
GO:0005634 nucleus 6.32% (6/95) 2.87 0.000179 0.007222
GO:0006396 RNA processing 5.26% (5/95) 3.32 0.000153 0.008194
GO:0006325 chromatin organization 3.16% (3/95) 4.52 0.00031 0.008312
GO:0005643 nuclear pore 2.11% (2/95) 5.94 0.000476 0.010947
GO:0071840 cellular component organization or biogenesis 5.26% (5/95) 2.73 0.000971 0.013021
GO:0044424 intracellular part 11.58% (11/95) 1.61 0.000927 0.013566
GO:0043231 intracellular membrane-bounded organelle 6.32% (6/95) 2.47 0.000786 0.014068
GO:0043227 membrane-bounded organelle 6.32% (6/95) 2.47 0.000786 0.014068
GO:0003723 RNA binding 5.26% (5/95) 2.76 0.000895 0.014403
GO:0006413 translational initiation 2.11% (2/95) 5.13 0.00149 0.017139
GO:0044422 organelle part 5.26% (5/95) 2.38 0.002808 0.017391
GO:0044446 intracellular organelle part 5.26% (5/95) 2.38 0.002808 0.017391
GO:0044464 cell part 11.58% (11/95) 1.54 0.001428 0.017681
GO:0006476 protein deacetylation 1.05% (1/95) 8.52 0.002724 0.018271
GO:0098732 macromolecule deacylation 1.05% (1/95) 8.52 0.002724 0.018271
GO:0019905 syntaxin binding 1.05% (1/95) 8.52 0.002724 0.018271
GO:0035601 protein deacylation 1.05% (1/95) 8.52 0.002724 0.018271
GO:0016575 histone deacetylation 1.05% (1/95) 8.52 0.002724 0.018271
GO:0000149 SNARE binding 1.05% (1/95) 8.52 0.002724 0.018271
GO:0065004 protein-DNA complex assembly 2.11% (2/95) 4.82 0.002286 0.021652
GO:0034728 nucleosome organization 2.11% (2/95) 4.82 0.002286 0.021652
GO:0071824 protein-DNA complex subunit organization 2.11% (2/95) 4.77 0.002465 0.022046
GO:0006334 nucleosome assembly 2.11% (2/95) 4.88 0.002114 0.022691
GO:0016070 RNA metabolic process 5.26% (5/95) 2.27 0.003932 0.023448
GO:0006397 mRNA processing 2.11% (2/95) 4.23 0.005094 0.029291
GO:0016043 cellular component organization 4.21% (4/95) 2.5 0.005652 0.03138
GO:0016071 mRNA metabolic process 2.11% (2/95) 3.97 0.007327 0.039323
GO:0007031 peroxisome organization 1.05% (1/95) 6.94 0.008149 0.042323
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_9 0.035 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_21 0.04 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_42 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_48 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_51 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_61 0.045 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_93 0.032 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_117 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_122 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_197 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_202 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_215 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_228 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_240 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_272 0.022 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_31 0.027 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.019 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_81 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_194 0.035 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_6 0.025 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_10 0.04 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_99 0.024 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_133 0.031 Gene family Compare
Oryza sativa HCCA cluster Cluster_13 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_26 0.039 Gene family Compare
Oryza sativa HCCA cluster Cluster_28 0.022 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.043 Gene family Compare
Oryza sativa HCCA cluster Cluster_173 0.039 Gene family Compare
Oryza sativa HCCA cluster Cluster_182 0.026 Gene family Compare
Oryza sativa HCCA cluster Cluster_276 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_297 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_311 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_317 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_258 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_326 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_334 0.024 Gene family Compare
Picea abies HCCA cluster Cluster_376 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_390 0.022 Gene family Compare
Picea abies HCCA cluster Cluster_432 0.029 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_66 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_70 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_91 0.041 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_102 0.039 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_138 0.036 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_147 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_180 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_190 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_207 0.021 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_210 0.022 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_121 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_217 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_270 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_70 0.026 Gene family Compare
Vitis vinifera HCCA cluster Cluster_85 0.038 Gene family Compare
Vitis vinifera HCCA cluster Cluster_154 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_161 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_171 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_172 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_186 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_189 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_195 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_202 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_207 0.026 Gene family Compare
Vitis vinifera HCCA cluster Cluster_224 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_232 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_15 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_16 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_67 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_79 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_172 0.103 Gene family Compare
Zea mays HCCA cluster Cluster_214 0.028 Gene family Compare
Zea mays HCCA cluster Cluster_257 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_259 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_272 0.061 Gene family Compare
Zea mays HCCA cluster Cluster_278 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_281 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_286 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_307 0.037 Gene family Compare
Zea mays HCCA cluster Cluster_322 0.033 Gene family Compare
Zea mays HCCA cluster Cluster_338 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_346 0.037 Gene family Compare
Sequences (95) (download table)

InterPro Domains

GO Terms

Family Terms