Coexpression cluster: Cluster_172 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044281 small molecule metabolic process 9.72% (7/72) 4.7 0.0 2e-06
GO:0006082 organic acid metabolic process 8.33% (6/72) 5.04 0.0 2e-06
GO:0006520 cellular amino acid metabolic process 6.94% (5/72) 5.61 0.0 3e-06
GO:0019752 carboxylic acid metabolic process 6.94% (5/72) 4.83 1e-06 2.9e-05
GO:0043436 oxoacid metabolic process 6.94% (5/72) 4.83 1e-06 2.9e-05
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 4.17% (3/72) 5.94 1.6e-05 0.000414
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 4.17% (3/72) 5.82 2e-05 0.000465
GO:0003824 catalytic activity 15.28% (11/72) 2.08 5.2e-05 0.001028
GO:0016053 organic acid biosynthetic process 4.17% (3/72) 5.31 6e-05 0.001053
GO:0006807 nitrogen compound metabolic process 12.5% (9/72) 2.31 8.1e-05 0.001285
GO:1901564 organonitrogen compound metabolic process 11.11% (8/72) 2.49 9e-05 0.001302
GO:0008152 metabolic process 13.89% (10/72) 2.09 0.000112 0.001487
GO:0044283 small molecule biosynthetic process 4.17% (3/72) 4.94 0.00013 0.001588
GO:0003674 molecular_function 20.83% (15/72) 1.55 0.000141 0.001607
GO:0044237 cellular metabolic process 12.5% (9/72) 2.15 0.000185 0.001958
GO:0071704 organic substance metabolic process 12.5% (9/72) 2.09 0.00025 0.002482
GO:0009058 biosynthetic process 8.33% (6/72) 2.6 0.000467 0.004372
GO:1901566 organonitrogen compound biosynthetic process 6.94% (5/72) 2.94 0.000502 0.004437
GO:0008652 cellular amino acid biosynthetic process 2.78% (2/72) 5.65 0.000726 0.006072
GO:0044238 primary metabolic process 11.11% (8/72) 1.99 0.000902 0.006832
GO:1901605 alpha-amino acid metabolic process 2.78% (2/72) 5.49 0.000898 0.007142
GO:0009987 cellular process 12.5% (9/72) 1.77 0.001228 0.008875
GO:0055114 obsolete oxidation-reduction process 5.56% (4/72) 3.06 0.001378 0.009523
GO:0008150 biological_process 13.89% (10/72) 1.62 0.001441 0.009544
GO:0009098 leucine biosynthetic process 1.39% (1/72) 8.82 0.002218 0.009797
GO:0009081 branched-chain amino acid metabolic process 1.39% (1/72) 8.82 0.002218 0.009797
GO:0004834 tryptophan synthase activity 1.39% (1/72) 8.82 0.002218 0.009797
GO:0009082 branched-chain amino acid biosynthetic process 1.39% (1/72) 8.82 0.002218 0.009797
GO:0004455 ketol-acid reductoisomerase activity 1.39% (1/72) 8.82 0.002218 0.009797
GO:0003852 2-isopropylmalate synthase activity 1.39% (1/72) 8.82 0.002218 0.009797
GO:0006551 leucine metabolic process 1.39% (1/72) 8.82 0.002218 0.009797
GO:0016491 oxidoreductase activity 5.56% (4/72) 2.84 0.002379 0.010225
GO:0044249 cellular biosynthetic process 6.94% (5/72) 2.41 0.002537 0.010615
GO:1901360 organic cyclic compound metabolic process 5.56% (4/72) 2.93 0.001933 0.010977
GO:1901576 organic substance biosynthetic process 6.94% (5/72) 2.39 0.002722 0.011097
GO:0016829 lyase activity 2.78% (2/72) 4.96 0.001895 0.011161
GO:0006725 cellular aromatic compound metabolic process 5.56% (4/72) 2.95 0.001846 0.011286
GO:0046483 heterocycle metabolic process 5.56% (4/72) 2.95 0.001817 0.011556
GO:0046394 carboxylic acid biosynthetic process 2.78% (2/72) 4.86 0.002164 0.011867
GO:0036094 small molecule binding 6.94% (5/72) 2.22 0.004453 0.012874
GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer 1.39% (1/72) 7.82 0.004432 0.013049
GO:0009112 nucleobase metabolic process 1.39% (1/72) 7.82 0.004432 0.013049
GO:0006586 indolalkylamine metabolic process 1.39% (1/72) 7.82 0.004432 0.013049
GO:0044106 cellular amine metabolic process 1.39% (1/72) 7.82 0.004432 0.013049
GO:0006206 pyrimidine nucleobase metabolic process 1.39% (1/72) 7.82 0.004432 0.013049
GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process 1.39% (1/72) 7.82 0.004432 0.013049
GO:0019856 pyrimidine nucleobase biosynthetic process 1.39% (1/72) 7.82 0.004432 0.013049
GO:0046112 nucleobase biosynthetic process 1.39% (1/72) 7.82 0.004432 0.013049
GO:0006576 cellular biogenic amine metabolic process 1.39% (1/72) 7.82 0.004432 0.013049
GO:0042430 indole-containing compound metabolic process 1.39% (1/72) 7.82 0.004432 0.013049
GO:0006568 tryptophan metabolic process 1.39% (1/72) 7.82 0.004432 0.013049
GO:0004590 orotidine-5'-phosphate decarboxylase activity 1.39% (1/72) 7.82 0.004432 0.013049
GO:0008168 methyltransferase activity 2.78% (2/72) 4.53 0.00341 0.013554
GO:0034641 cellular nitrogen compound metabolic process 6.94% (5/72) 2.22 0.004415 0.016713
GO:0016741 transferase activity, transferring one-carbon groups 2.78% (2/72) 4.36 0.004322 0.016761
GO:0009308 amine metabolic process 1.39% (1/72) 7.23 0.00664 0.017895
GO:0008173 RNA methyltransferase activity 1.39% (1/72) 7.23 0.00664 0.017895
GO:0009086 methionine biosynthetic process 1.39% (1/72) 7.23 0.00664 0.017895
GO:0000097 sulfur amino acid biosynthetic process 1.39% (1/72) 7.23 0.00664 0.017895
GO:0005488 binding 11.11% (8/72) 1.49 0.007607 0.020157
GO:0072527 pyrimidine-containing compound metabolic process 1.39% (1/72) 6.82 0.008844 0.020988
GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity 1.39% (1/72) 6.82 0.008844 0.020988
GO:0008172 S-methyltransferase activity 1.39% (1/72) 6.82 0.008844 0.020988
GO:0072528 pyrimidine-containing compound biosynthetic process 1.39% (1/72) 6.82 0.008844 0.020988
GO:0009072 aromatic amino acid family metabolic process 1.39% (1/72) 6.82 0.008844 0.020988
GO:0016831 carboxy-lyase activity 1.39% (1/72) 6.82 0.008844 0.020988
GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity 1.39% (1/72) 6.82 0.008844 0.020988
GO:0016836 hydro-lyase activity 1.39% (1/72) 6.49 0.011043 0.025083
GO:0009067 aspartate family amino acid biosynthetic process 1.39% (1/72) 6.49 0.011043 0.025083
GO:0006555 methionine metabolic process 1.39% (1/72) 6.49 0.011043 0.025083
GO:0006139 nucleobase-containing compound metabolic process 4.17% (3/72) 2.61 0.013317 0.027861
GO:1901363 heterocyclic compound binding 8.33% (6/72) 1.62 0.013274 0.02814
GO:0097159 organic cyclic compound binding 8.33% (6/72) 1.62 0.013274 0.02814
GO:1901657 glycosyl compound metabolic process 1.39% (1/72) 6.23 0.013237 0.028831
GO:0009116 nucleoside metabolic process 1.39% (1/72) 6.23 0.013237 0.028831
GO:0043167 ion binding 6.94% (5/72) 1.83 0.013222 0.02961
GO:0050661 NADP binding 1.39% (1/72) 6.01 0.015426 0.03066
GO:0016830 carbon-carbon lyase activity 1.39% (1/72) 6.01 0.015426 0.03066
GO:0044272 sulfur compound biosynthetic process 1.39% (1/72) 6.01 0.015426 0.03066
GO:0009066 aspartate family amino acid metabolic process 1.39% (1/72) 6.01 0.015426 0.03066
GO:0000096 sulfur amino acid metabolic process 1.39% (1/72) 5.82 0.017611 0.034569
GO:0043168 anion binding 5.56% (4/72) 2.0 0.018028 0.034957
GO:0000166 nucleotide binding 5.56% (4/72) 1.95 0.02034 0.0385
GO:1901265 nucleoside phosphate binding 5.56% (4/72) 1.95 0.02034 0.0385
GO:0140098 catalytic activity, acting on RNA 2.78% (2/72) 3.17 0.020883 0.039064
GO:0070279 vitamin B6 binding 1.39% (1/72) 5.49 0.021965 0.039688
GO:0030170 pyridoxal phosphate binding 1.39% (1/72) 5.49 0.021965 0.039688
GO:0016835 carbon-oxygen lyase activity 1.39% (1/72) 5.49 0.021965 0.039688
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_178 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_7 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_31 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_40 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_62 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_71 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_78 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_113 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_130 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_141 0.068 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_161 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_191 0.033 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_196 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_4 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_10 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_48 0.027 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_66 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_111 0.034 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_137 0.032 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_167 0.042 Archaeplastida Compare
Gingko biloba HCCA Cluster_81 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_192 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_251 0.039 Archaeplastida Compare
Gingko biloba HCCA Cluster_331 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_10 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_25 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_37 0.048 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_53 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_92 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_98 0.046 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_123 0.034 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_143 0.033 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_165 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_16 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_78 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_82 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_142 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_176 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_186 0.053 Archaeplastida Compare
Oryza sativa HCCA Cluster_197 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_379 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_1 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_94 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_150 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_69 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_83 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_236 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_237 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_362 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_389 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_410 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_52 0.028 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_65 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_170 0.042 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_55 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_115 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_135 0.064 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_197 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_237 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_39 0.036 Archaeplastida Compare
Vitis vinifera HCCA Cluster_48 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_98 0.034 Archaeplastida Compare
Vitis vinifera HCCA Cluster_154 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_161 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_188 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_1 0.04 Archaeplastida Compare
Zea mays HCCA Cluster_20 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_59 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_160 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_219 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_226 0.037 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_355 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_176 0.015 LandPlants Compare
Amborella trichopoda HCCA Cluster_178 0.026 LandPlants Compare
Amborella trichopoda HCCA Cluster_184 0.017 LandPlants Compare
Amborella trichopoda HCCA Cluster_246 0.015 LandPlants Compare
Amborella trichopoda HCCA Cluster_248 0.017 LandPlants Compare
Amborella trichopoda HCCA Cluster_259 0.016 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_7 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_31 0.023 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_33 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_40 0.016 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_62 0.026 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_71 0.016 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_78 0.023 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_113 0.021 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_130 0.025 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_141 0.068 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_161 0.023 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_191 0.033 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_196 0.021 LandPlants Compare
Gingko biloba HCCA Cluster_62 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_75 0.017 LandPlants Compare
Gingko biloba HCCA Cluster_161 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_192 0.024 LandPlants Compare
Gingko biloba HCCA Cluster_220 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_251 0.031 LandPlants Compare
Gingko biloba HCCA Cluster_331 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_10 0.02 LandPlants Compare
Marchantia polymorpha HCCA Cluster_25 0.019 LandPlants Compare
Marchantia polymorpha HCCA Cluster_37 0.048 LandPlants Compare
Marchantia polymorpha HCCA Cluster_53 0.023 LandPlants Compare
Marchantia polymorpha HCCA Cluster_64 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_92 0.026 LandPlants Compare
Marchantia polymorpha HCCA Cluster_98 0.045 LandPlants Compare
Marchantia polymorpha HCCA Cluster_123 0.034 LandPlants Compare
Marchantia polymorpha HCCA Cluster_143 0.033 LandPlants Compare
Marchantia polymorpha HCCA Cluster_165 0.021 LandPlants Compare
Oryza sativa HCCA Cluster_16 0.028 LandPlants Compare
Oryza sativa HCCA Cluster_26 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_78 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_82 0.024 LandPlants Compare
Oryza sativa HCCA Cluster_127 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_142 0.025 LandPlants Compare
Oryza sativa HCCA Cluster_176 0.026 LandPlants Compare
Oryza sativa HCCA Cluster_186 0.047 LandPlants Compare
Oryza sativa HCCA Cluster_203 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_210 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_379 0.019 LandPlants Compare
Physcomitrella patens HCCA Cluster_1 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_93 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_94 0.019 LandPlants Compare
Physcomitrella patens HCCA Cluster_150 0.027 LandPlants Compare
Physcomitrella patens HCCA Cluster_227 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_272 0.014 LandPlants Compare
Picea abies HCCA Cluster_69 0.015 LandPlants Compare
Picea abies HCCA Cluster_83 0.018 LandPlants Compare
Picea abies HCCA Cluster_234 0.017 LandPlants Compare
Picea abies HCCA Cluster_237 0.025 LandPlants Compare
Picea abies HCCA Cluster_362 0.02 LandPlants Compare
Picea abies HCCA Cluster_389 0.025 LandPlants Compare
Picea abies HCCA Cluster_410 0.019 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_52 0.024 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_65 0.029 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_97 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_128 0.017 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_170 0.033 LandPlants Compare
Solanum lycopersicum HCCA Cluster_14 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_55 0.021 LandPlants Compare
Solanum lycopersicum HCCA Cluster_115 0.024 LandPlants Compare
Solanum lycopersicum HCCA Cluster_135 0.063 LandPlants Compare
Solanum lycopersicum HCCA Cluster_197 0.031 LandPlants Compare
Solanum lycopersicum HCCA Cluster_210 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_225 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_39 0.036 LandPlants Compare
Vitis vinifera HCCA Cluster_48 0.029 LandPlants Compare
Vitis vinifera HCCA Cluster_98 0.034 LandPlants Compare
Vitis vinifera HCCA Cluster_154 0.021 LandPlants Compare
Vitis vinifera HCCA Cluster_161 0.031 LandPlants Compare
Vitis vinifera HCCA Cluster_188 0.025 LandPlants Compare
Vitis vinifera HCCA Cluster_208 0.017 LandPlants Compare
Zea mays HCCA Cluster_1 0.04 LandPlants Compare
Zea mays HCCA Cluster_20 0.025 LandPlants Compare
Zea mays HCCA Cluster_71 0.017 LandPlants Compare
Zea mays HCCA Cluster_145 0.017 LandPlants Compare
Zea mays HCCA Cluster_160 0.036 LandPlants Compare
Zea mays HCCA Cluster_162 0.015 LandPlants Compare
Zea mays HCCA Cluster_199 0.015 LandPlants Compare
Zea mays HCCA Cluster_210 0.015 LandPlants Compare
Zea mays HCCA Cluster_226 0.03 LandPlants Compare
Zea mays HCCA Cluster_267 0.018 LandPlants Compare
Zea mays HCCA Cluster_279 0.017 LandPlants Compare
Zea mays HCCA Cluster_320 0.016 LandPlants Compare
Zea mays HCCA Cluster_345 0.017 LandPlants Compare
Zea mays HCCA Cluster_355 0.02 LandPlants Compare
Sequences (72) (download table)

InterPro Domains

GO Terms

Family Terms