Coexpression cluster: Cluster_110 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034062 5'-3' RNA polymerase activity 7.46% (5/67) 5.39 0.0 4e-06
GO:0097747 RNA polymerase activity 7.46% (5/67) 5.39 0.0 4e-06
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 7.46% (5/67) 5.54 0.0 8e-06
GO:0006351 transcription, DNA-templated 7.46% (5/67) 4.81 1e-06 2e-05
GO:0097659 nucleic acid-templated transcription 7.46% (5/67) 4.81 1e-06 2e-05
GO:0016779 nucleotidyltransferase activity 7.46% (5/67) 4.49 3e-06 5e-05
GO:0032774 RNA biosynthetic process 7.46% (5/67) 4.38 4e-06 6.2e-05
GO:0034654 nucleobase-containing compound biosynthetic process 7.46% (5/67) 3.56 6.8e-05 0.000753
GO:0140098 catalytic activity, acting on RNA 7.46% (5/67) 3.58 6.4e-05 0.000794
GO:0018130 heterocycle biosynthetic process 7.46% (5/67) 3.29 0.000163 0.001468
GO:0019438 aromatic compound biosynthetic process 7.46% (5/67) 3.29 0.000163 0.001468
GO:0009536 plastid 4.48% (3/67) 4.59 0.000272 0.001922
GO:0009507 chloroplast 4.48% (3/67) 4.59 0.000272 0.001922
GO:1901362 organic cyclic compound biosynthetic process 7.46% (5/67) 3.16 0.000247 0.002039
GO:0016070 RNA metabolic process 7.46% (5/67) 2.77 0.00084 0.005542
GO:0034645 cellular macromolecule biosynthetic process 7.46% (5/67) 2.45 0.002215 0.013703
GO:0090304 nucleic acid metabolic process 7.46% (5/67) 2.38 0.002762 0.016084
GO:0009059 macromolecule biosynthetic process 7.46% (5/67) 2.36 0.002931 0.016123
GO:0044271 cellular nitrogen compound biosynthetic process 7.46% (5/67) 2.18 0.005027 0.026192
GO:0006139 nucleobase-containing compound metabolic process 7.46% (5/67) 2.0 0.008221 0.040693
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_79 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_80 0.046 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_165 0.032 Gene family Compare
Oryza sativa HCCA cluster Cluster_243 0.065 Gene family Compare
Oryza sativa HCCA cluster Cluster_334 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_153 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_2 0.051 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_4 0.026 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_22 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_24 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_29 0.022 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_30 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_70 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_78 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_79 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_93 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_107 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_113 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_130 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_132 0.088 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_168 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_191 0.037 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_192 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_215 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_220 0.032 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_228 0.034 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_253 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_259 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_284 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_404 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_12 0.038 Gene family Compare
Sequences (67) (download table)

InterPro Domains

GO Terms

Family Terms