Coexpression cluster: Cluster_40 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0097747 RNA polymerase activity 5.26% (4/76) 4.69 1.8e-05 0.000358
GO:0034062 5'-3' RNA polymerase activity 5.26% (4/76) 4.69 1.8e-05 0.000358
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 5.26% (4/76) 4.69 1.8e-05 0.000358
GO:0016779 nucleotidyltransferase activity 5.26% (4/76) 4.43 3.6e-05 0.000417
GO:0097659 nucleic acid-templated transcription 5.26% (4/76) 4.49 3.1e-05 0.000418
GO:0006351 DNA-templated transcription 5.26% (4/76) 4.49 3.1e-05 0.000418
GO:0032774 RNA biosynthetic process 5.26% (4/76) 4.36 4.4e-05 0.000443
GO:0003677 DNA binding 7.89% (6/76) 3.74 6e-06 0.000491
GO:0090304 nucleic acid metabolic process 6.58% (5/76) 3.55 7e-05 0.000624
GO:0140098 catalytic activity, acting on RNA 5.26% (4/76) 4.08 9.5e-05 0.000694
GO:0034654 nucleobase-containing compound biosynthetic process 5.26% (4/76) 4.09 9.2e-05 0.000734
GO:0018130 heterocycle biosynthetic process 5.26% (4/76) 3.94 0.000137 0.000846
GO:0019438 aromatic compound biosynthetic process 5.26% (4/76) 3.97 0.000128 0.000854
GO:1901362 organic cyclic compound biosynthetic process 5.26% (4/76) 3.89 0.000158 0.0009
GO:0140640 catalytic activity, acting on a nucleic acid 5.26% (4/76) 3.78 0.00021 0.001052
GO:0006139 nucleobase-containing compound metabolic process 6.58% (5/76) 3.23 0.000202 0.001075
GO:0006725 cellular aromatic compound metabolic process 6.58% (5/76) 3.15 0.000255 0.001135
GO:1901360 organic cyclic compound metabolic process 6.58% (5/76) 3.14 0.00027 0.001139
GO:0046483 heterocycle metabolic process 6.58% (5/76) 3.16 0.000251 0.001179
GO:0016070 RNA metabolic process 5.26% (4/76) 3.61 0.000334 0.001337
GO:0003676 nucleic acid binding 7.89% (6/76) 2.67 0.000376 0.001432
GO:0016772 transferase activity, transferring phosphorus-containing groups 6.58% (5/76) 2.91 0.00056 0.002035
GO:0016740 transferase activity 6.58% (5/76) 2.37 0.00284 0.00988
GO:0044249 cellular biosynthetic process 6.58% (5/76) 2.36 0.002991 0.009969
GO:1901576 organic substance biosynthetic process 6.58% (5/76) 2.33 0.003276 0.010483
GO:0009058 biosynthetic process 6.58% (5/76) 2.28 0.003758 0.011563
GO:0044237 cellular metabolic process 9.21% (7/76) 1.78 0.00422 0.012504
GO:0034641 cellular nitrogen compound metabolic process 6.58% (5/76) 2.14 0.005651 0.01559
GO:0044238 primary metabolic process 9.21% (7/76) 1.71 0.005571 0.015917
GO:0071704 organic substance metabolic process 9.21% (7/76) 1.66 0.006761 0.01803
GO:0043170 macromolecule metabolic process 7.89% (6/76) 1.8 0.007557 0.019502
GO:0009059 macromolecule biosynthetic process 5.26% (4/76) 2.34 0.008232 0.020581
GO:0005992 trehalose biosynthetic process 1.32% (1/76) 6.74 0.009334 0.022627
GO:0044271 cellular nitrogen compound biosynthetic process 5.26% (4/76) 2.26 0.009921 0.023344
GO:0008152 metabolic process 9.21% (7/76) 1.5 0.01176 0.026133
GO:0005991 trehalose metabolic process 1.32% (1/76) 6.42 0.011654 0.026637
GO:0006807 nitrogen compound metabolic process 7.89% (6/76) 1.64 0.012507 0.027041
GO:0046351 disaccharide biosynthetic process 1.32% (1/76) 6.15 0.013968 0.029406
GO:0005507 copper ion binding 1.32% (1/76) 5.74 0.018581 0.033033
GO:0009312 oligosaccharide biosynthetic process 1.32% (1/76) 5.74 0.018581 0.033033
GO:0005984 disaccharide metabolic process 1.32% (1/76) 5.74 0.018581 0.033033
GO:0009987 cellular process 9.21% (7/76) 1.39 0.017249 0.033657
GO:0097159 organic cyclic compound binding 7.89% (6/76) 1.55 0.016979 0.033959
GO:1901363 heterocyclic compound binding 7.89% (6/76) 1.55 0.016979 0.033959
GO:0003824 catalytic activity 9.21% (7/76) 1.38 0.017853 0.034006
GO:0009311 oligosaccharide metabolic process 1.32% (1/76) 5.42 0.023173 0.039443
GO:0034637 cellular carbohydrate biosynthetic process 1.32% (1/76) 5.42 0.023173 0.039443
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Physcomitrella patens HCCA Cluster_2 0.006 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_3 0.05 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_4 0.018 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_7 0.056 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_8 0.048 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_13 0.064 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_17 0.008 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_18 0.004 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_20 0.01 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_21 0.036 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_22 0.009 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_23 0.004 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_24 0.011 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_27 0.046 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_29 0.004 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_30 0.008 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_32 0.029 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_33 0.013 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_34 0.006 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_37 0.004 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_42 0.008 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_43 0.038 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_45 0.016 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_48 0.007 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_49 0.055 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_51 0.004 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_53 0.067 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_54 0.007 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_55 0.026 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_56 0.017 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_57 0.004 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_59 0.012 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_61 0.048 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_65 0.053 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_67 0.037 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_68 0.016 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_70 0.007 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_71 0.039 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_75 0.03 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_76 0.008 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_79 0.022 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_83 0.005 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_91 0.032 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_93 0.024 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_94 0.015 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_96 0.017 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_98 0.015 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_99 0.043 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_100 0.007 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_102 0.042 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_109 0.006 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_110 0.043 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_122 0.007 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_126 0.015 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_132 0.035 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_136 0.008 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_143 0.04 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_144 0.007 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_151 0.006 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_156 0.007 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_161 0.035 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_165 0.031 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_166 0.038 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_170 0.006 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_171 0.007 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_172 0.028 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_176 0.058 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_179 0.033 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_184 0.02 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_187 0.015 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_190 0.006 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_191 0.032 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_194 0.05 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_195 0.008 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_199 0.008 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_200 0.004 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_205 0.006 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_209 0.007 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_215 0.007 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_217 0.006 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_235 0.054 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_236 0.024 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_239 0.009 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_240 0.031 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_241 0.006 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_254 0.025 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_268 0.007 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_273 0.062 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_275 0.006 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_289 0.008 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_291 0.009 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_297 0.018 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_301 0.032 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_313 0.01 OrthoFinder output from all 39 species Compare
Selaginella moellendorffii HCCA Cluster_198 0.008 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_159 0.007 OrthoFinder output from all 39 species Compare
Sequences (76) (download table)

InterPro Domains

GO Terms

Family Terms