Coexpression cluster: Cluster_28 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003735 structural constituent of ribosome 12.68% (9/71) 5.31 0.0 0.0
GO:0005198 structural molecule activity 12.68% (9/71) 5.0 0.0 0.0
GO:0009521 photosystem 7.04% (5/71) 6.71 0.0 0.0
GO:0044436 thylakoid part 8.45% (6/71) 5.88 0.0 0.0
GO:0098796 membrane protein complex 8.45% (6/71) 4.75 0.0 3e-06
GO:0019684 photosynthesis, light reaction 4.23% (3/71) 7.88 0.0 4e-06
GO:0008152 metabolic process 30.99% (22/71) 1.76 0.0 5e-06
GO:0044425 membrane part 9.86% (7/71) 3.74 1e-06 2.1e-05
GO:0009522 photosystem I 4.23% (3/71) 6.88 2e-06 3.3e-05
GO:0005575 cellular_component 16.9% (12/71) 2.43 2e-06 3.4e-05
GO:0009167 purine ribonucleoside monophosphate metabolic process 5.63% (4/71) 4.94 9e-06 7.6e-05
GO:0009161 ribonucleoside monophosphate metabolic process 5.63% (4/71) 4.94 9e-06 7.6e-05
GO:0009123 nucleoside monophosphate metabolic process 5.63% (4/71) 4.94 9e-06 7.6e-05
GO:0009126 purine nucleoside monophosphate metabolic process 5.63% (4/71) 4.94 9e-06 7.6e-05
GO:0009141 nucleoside triphosphate metabolic process 5.63% (4/71) 5.01 7e-06 7.8e-05
GO:0009199 ribonucleoside triphosphate metabolic process 5.63% (4/71) 5.01 7e-06 7.8e-05
GO:0009144 purine nucleoside triphosphate metabolic process 5.63% (4/71) 5.01 7e-06 7.8e-05
GO:0009205 purine ribonucleoside triphosphate metabolic process 5.63% (4/71) 5.01 7e-06 7.8e-05
GO:0006091 generation of precursor metabolites and energy 5.63% (4/71) 4.9 1e-05 8e-05
GO:0032991 protein-containing complex 8.45% (6/71) 3.7 7e-06 0.0001
GO:0046034 ATP metabolic process 5.63% (4/71) 5.05 6e-06 0.000102
GO:0055114 oxidation-reduction process 12.68% (9/71) 2.62 1.5e-05 0.000117
GO:0019693 ribose phosphate metabolic process 5.63% (4/71) 4.62 2.1e-05 0.000141
GO:0009150 purine ribonucleotide metabolic process 5.63% (4/71) 4.62 2.1e-05 0.000141
GO:0017144 drug metabolic process 5.63% (4/71) 4.62 2.1e-05 0.000141
GO:0009259 ribonucleotide metabolic process 5.63% (4/71) 4.62 2.1e-05 0.000141
GO:0009117 nucleotide metabolic process 5.63% (4/71) 4.54 2.7e-05 0.000159
GO:0006163 purine nucleotide metabolic process 5.63% (4/71) 4.54 2.7e-05 0.000159
GO:0006753 nucleoside phosphate metabolic process 5.63% (4/71) 4.54 2.7e-05 0.000159
GO:0015985 energy coupled proton transport, down electrochemical gradient 2.82% (2/71) 7.71 3e-05 0.000163
GO:0015986 ATP synthesis coupled proton transport 2.82% (2/71) 7.71 3e-05 0.000163
GO:0072521 purine-containing compound metabolic process 5.63% (4/71) 4.51 2.9e-05 0.000165
GO:0044464 cell part 11.27% (8/71) 2.65 4.1e-05 0.000214
GO:0055086 nucleobase-containing small molecule metabolic process 5.63% (4/71) 4.27 5.5e-05 0.000283
GO:1901135 carbohydrate derivative metabolic process 5.63% (4/71) 4.12 8.3e-05 0.000411
GO:0008150 biological_process 32.39% (23/71) 1.15 0.000118 0.00057
GO:0019637 organophosphate metabolic process 5.63% (4/71) 3.8 0.000197 0.000924
GO:0009523 photosystem II 2.82% (2/71) 6.49 0.000208 0.000952
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 4.23% (3/71) 4.67 0.000223 0.000994
GO:0097747 RNA polymerase activity 4.23% (3/71) 4.56 0.000281 0.001166
GO:0034062 5'-3' RNA polymerase activity 4.23% (3/71) 4.56 0.000281 0.001166
GO:0044424 intracellular part 8.45% (6/71) 2.73 0.000291 0.001176
GO:0016651 oxidoreductase activity, acting on NAD(P)H 2.82% (2/71) 6.29 0.000277 0.001204
GO:1902600 proton transmembrane transport 2.82% (2/71) 5.71 0.000647 0.002559
GO:0015077 monovalent inorganic cation transmembrane transporter activity 2.82% (2/71) 5.59 0.000763 0.002825
GO:0015078 proton transmembrane transporter activity 2.82% (2/71) 5.59 0.000763 0.002825
GO:0016779 nucleotidyltransferase activity 4.23% (3/71) 4.07 0.000761 0.002943
GO:0044237 cellular metabolic process 15.49% (11/71) 1.61 0.000835 0.003028
GO:0140098 catalytic activity, acting on RNA 4.23% (3/71) 3.75 0.001456 0.00517
GO:0022890 inorganic cation transmembrane transporter activity 2.82% (2/71) 4.97 0.001832 0.006376
GO:0044281 small molecule metabolic process 5.63% (4/71) 2.88 0.002134 0.007282
GO:0045333 cellular respiration 1.41% (1/71) 8.29 0.003186 0.009558
GO:0031361 integral component of thylakoid membrane 1.41% (1/71) 8.29 0.003186 0.009558
GO:0015977 carbon fixation 1.41% (1/71) 8.29 0.003186 0.009558
GO:0009060 aerobic respiration 1.41% (1/71) 8.29 0.003186 0.009558
GO:0015980 energy derivation by oxidation of organic compounds 1.41% (1/71) 8.29 0.003186 0.009558
GO:0031360 intrinsic component of thylakoid membrane 1.41% (1/71) 8.29 0.003186 0.009558
GO:0008324 cation transmembrane transporter activity 2.82% (2/71) 4.65 0.002863 0.009581
GO:0015672 monovalent inorganic cation transport 2.82% (2/71) 4.54 0.003336 0.00984
GO:0009987 cellular process 15.49% (11/71) 1.29 0.004811 0.013953
GO:0006754 ATP biosynthetic process 2.82% (2/71) 4.16 0.005564 0.014668
GO:0009145 purine nucleoside triphosphate biosynthetic process 2.82% (2/71) 4.16 0.005564 0.014668
GO:0009142 nucleoside triphosphate biosynthetic process 2.82% (2/71) 4.16 0.005564 0.014668
GO:0009201 ribonucleoside triphosphate biosynthetic process 2.82% (2/71) 4.16 0.005564 0.014668
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 2.82% (2/71) 4.16 0.005564 0.014668
GO:0015318 inorganic molecular entity transmembrane transporter activity 2.82% (2/71) 4.16 0.005564 0.014668
GO:0009127 purine nucleoside monophosphate biosynthetic process 2.82% (2/71) 4.05 0.006533 0.014763
GO:0015075 ion transmembrane transporter activity 2.82% (2/71) 4.05 0.006533 0.014763
GO:0009156 ribonucleoside monophosphate biosynthetic process 2.82% (2/71) 4.05 0.006533 0.014763
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 2.82% (2/71) 4.05 0.006533 0.014763
GO:0009124 nucleoside monophosphate biosynthetic process 2.82% (2/71) 4.05 0.006533 0.014763
GO:0098660 inorganic ion transmembrane transport 2.82% (2/71) 4.12 0.005879 0.014825
GO:0098655 cation transmembrane transport 2.82% (2/71) 4.12 0.005879 0.014825
GO:0098662 inorganic cation transmembrane transport 2.82% (2/71) 4.12 0.005879 0.014825
GO:0006793 phosphorus metabolic process 9.86% (7/71) 1.67 0.006335 0.015311
GO:0006796 phosphate-containing compound metabolic process 9.86% (7/71) 1.67 0.006335 0.015311
GO:0016772 transferase activity, transferring phosphorus-containing groups 4.23% (3/71) 3.01 0.006219 0.015459
GO:0046390 ribose phosphate biosynthetic process 2.82% (2/71) 3.9 0.007936 0.017261
GO:0009152 purine ribonucleotide biosynthetic process 2.82% (2/71) 3.9 0.007936 0.017261
GO:0009260 ribonucleotide biosynthetic process 2.82% (2/71) 3.9 0.007936 0.017261
GO:0034220 ion transmembrane transport 2.82% (2/71) 3.83 0.008684 0.018655
GO:0006164 purine nucleotide biosynthetic process 2.82% (2/71) 3.8 0.009069 0.018787
GO:0009165 nucleotide biosynthetic process 2.82% (2/71) 3.8 0.009069 0.018787
GO:1901293 nucleoside phosphate biosynthetic process 2.82% (2/71) 3.8 0.009069 0.018787
GO:0072522 purine-containing compound biosynthetic process 2.82% (2/71) 3.77 0.009462 0.01937
GO:0006139 nucleobase-containing compound metabolic process 5.63% (4/71) 2.25 0.010059 0.020352
GO:1901137 carbohydrate derivative biosynthetic process 2.82% (2/71) 3.68 0.010686 0.021371
GO:0022857 transmembrane transporter activity 2.82% (2/71) 3.57 0.012419 0.024556
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 1.41% (1/71) 6.29 0.012684 0.024798
GO:0006725 cellular aromatic compound metabolic process 5.63% (4/71) 2.13 0.013331 0.025774
GO:0005215 transporter activity 2.82% (2/71) 3.44 0.014746 0.028196
GO:0046483 heterocycle metabolic process 5.63% (4/71) 2.08 0.014943 0.028262
GO:1901360 organic cyclic compound metabolic process 5.63% (4/71) 2.07 0.01545 0.028906
GO:0009055 electron transfer activity 2.82% (2/71) 3.27 0.018292 0.033861
GO:0090407 organophosphate biosynthetic process 2.82% (2/71) 3.25 0.018826 0.034122
GO:0034641 cellular nitrogen compound metabolic process 5.63% (4/71) 1.98 0.018717 0.034281
GO:1901564 organonitrogen compound metabolic process 11.27% (8/71) 1.21 0.021949 0.039372
GO:0016020 membrane 4.23% (3/71) 2.2 0.027761 0.048792
GO:0034654 nucleobase-containing compound biosynthetic process 2.82% (2/71) 2.95 0.027582 0.048973
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_33 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_36 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_80 0.256 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_129 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_155 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_165 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_233 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_35 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_4 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_21 0.069 Gene family Compare
Oryza sativa HCCA cluster Cluster_30 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_83 0.041 Gene family Compare
Oryza sativa HCCA cluster Cluster_89 0.053 Gene family Compare
Oryza sativa HCCA cluster Cluster_91 0.031 Gene family Compare
Oryza sativa HCCA cluster Cluster_139 0.046 Gene family Compare
Oryza sativa HCCA cluster Cluster_157 0.036 Gene family Compare
Oryza sativa HCCA cluster Cluster_243 0.111 Gene family Compare
Oryza sativa HCCA cluster Cluster_326 0.038 Gene family Compare
Oryza sativa HCCA cluster Cluster_333 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_334 0.033 Gene family Compare
Picea abies HCCA cluster Cluster_35 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_109 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_188 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_196 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_202 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_253 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_268 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_368 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_396 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_452 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_485 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_600 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_61 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_118 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_134 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_143 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_145 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_187 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_2 0.077 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_3 0.051 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_4 0.031 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_25 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_58 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_73 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_114 0.032 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_120 0.08 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_132 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_154 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_174 0.022 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_177 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_220 0.09 Gene family Compare
Vitis vinifera HCCA cluster Cluster_12 0.073 Gene family Compare
Vitis vinifera HCCA cluster Cluster_40 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_64 0.038 Gene family Compare
Vitis vinifera HCCA cluster Cluster_66 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_94 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_187 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_3 0.038 Gene family Compare
Zea mays HCCA cluster Cluster_104 0.018 Gene family Compare
Sequences (71) (download table)

InterPro Domains

GO Terms

Family Terms