Coexpression cluster: Cluster_55 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005488 binding 33.85% (22/65) 1.52 3e-06 0.000392
GO:0043167 ion binding 16.92% (11/65) 2.15 3.1e-05 0.002328
GO:0003674 molecular_function 46.15% (30/65) 0.95 6.7e-05 0.003368
GO:1901363 heterocyclic compound binding 16.92% (11/65) 1.91 0.00014 0.004192
GO:0097159 organic cyclic compound binding 16.92% (11/65) 1.91 0.00014 0.004192
GO:0008270 zinc ion binding 7.69% (5/65) 3.11 0.000282 0.007055
GO:0043169 cation binding 9.23% (6/65) 2.5 0.000659 0.008988
GO:0006364 rRNA processing 3.08% (2/65) 5.84 0.000543 0.009043
GO:0016072 rRNA metabolic process 3.08% (2/65) 5.84 0.000543 0.009043
GO:0046872 metal ion binding 9.23% (6/65) 2.52 0.000613 0.009196
GO:0046914 transition metal ion binding 7.69% (5/65) 2.92 0.000527 0.011299
GO:0032956 regulation of actin cytoskeleton organization 1.54% (1/65) 7.42 0.005825 0.017832
GO:0032272 negative regulation of protein polymerization 1.54% (1/65) 7.42 0.005825 0.017832
GO:0032271 regulation of protein polymerization 1.54% (1/65) 7.42 0.005825 0.017832
GO:0031333 negative regulation of protein complex assembly 1.54% (1/65) 7.42 0.005825 0.017832
GO:0032535 regulation of cellular component size 1.54% (1/65) 7.42 0.005825 0.017832
GO:0030837 negative regulation of actin filament polymerization 1.54% (1/65) 7.42 0.005825 0.017832
GO:0030835 negative regulation of actin filament depolymerization 1.54% (1/65) 7.42 0.005825 0.017832
GO:0030834 regulation of actin filament depolymerization 1.54% (1/65) 7.42 0.005825 0.017832
GO:0030833 regulation of actin filament polymerization 1.54% (1/65) 7.42 0.005825 0.017832
GO:0030832 regulation of actin filament length 1.54% (1/65) 7.42 0.005825 0.017832
GO:0008064 regulation of actin polymerization or depolymerization 1.54% (1/65) 7.42 0.005825 0.017832
GO:0032970 regulation of actin filament-based process 1.54% (1/65) 7.42 0.005825 0.017832
GO:0043242 negative regulation of protein complex disassembly 1.54% (1/65) 7.42 0.005825 0.017832
GO:0090066 regulation of anatomical structure size 1.54% (1/65) 7.42 0.005825 0.017832
GO:0110053 regulation of actin filament organization 1.54% (1/65) 7.42 0.005825 0.017832
GO:0051693 actin filament capping 1.54% (1/65) 7.42 0.005825 0.017832
GO:0051494 negative regulation of cytoskeleton organization 1.54% (1/65) 7.42 0.005825 0.017832
GO:0051493 regulation of cytoskeleton organization 1.54% (1/65) 7.42 0.005825 0.017832
GO:0051016 barbed-end actin filament capping 1.54% (1/65) 7.42 0.005825 0.017832
GO:1901879 regulation of protein depolymerization 1.54% (1/65) 7.42 0.005825 0.017832
GO:1902903 regulation of supramolecular fiber organization 1.54% (1/65) 7.42 0.005825 0.017832
GO:1902904 negative regulation of supramolecular fiber organization 1.54% (1/65) 7.42 0.005825 0.017832
GO:0043254 regulation of protein complex assembly 1.54% (1/65) 7.42 0.005825 0.017832
GO:0043244 regulation of protein complex disassembly 1.54% (1/65) 7.42 0.005825 0.017832
GO:1901880 negative regulation of protein depolymerization 1.54% (1/65) 7.42 0.005825 0.017832
GO:0030688 preribosome, small subunit precursor 1.54% (1/65) 7.42 0.005825 0.017832
GO:0003690 double-stranded DNA binding 3.08% (2/65) 5.03 0.001697 0.018186
GO:0030983 mismatched DNA binding 3.08% (2/65) 5.03 0.001697 0.018186
GO:0035639 purine ribonucleoside triphosphate binding 7.69% (5/65) 2.09 0.00641 0.019231
GO:0034470 ncRNA processing 3.08% (2/65) 5.1 0.001539 0.019232
GO:0006139 nucleobase-containing compound metabolic process 6.15% (4/65) 2.38 0.007405 0.021778
GO:0032555 purine ribonucleotide binding 7.69% (5/65) 2.02 0.007822 0.022564
GO:0017076 purine nucleotide binding 7.69% (5/65) 2.01 0.007975 0.022569
GO:0032553 ribonucleotide binding 7.69% (5/65) 2.01 0.008129 0.02258
GO:0010639 negative regulation of organelle organization 1.54% (1/65) 6.84 0.008725 0.022961
GO:0051129 negative regulation of cellular component organization 1.54% (1/65) 6.84 0.008725 0.022961
GO:0033043 regulation of organelle organization 1.54% (1/65) 6.84 0.008725 0.022961
GO:0097367 carbohydrate derivative binding 7.69% (5/65) 1.97 0.008931 0.023098
GO:0090305 nucleic acid phosphodiester bond hydrolysis 1.54% (1/65) 8.42 0.002917 0.024306
GO:0090501 RNA phosphodiester bond hydrolysis 1.54% (1/65) 8.42 0.002917 0.024306
GO:0000469 cleavage involved in rRNA processing 1.54% (1/65) 8.42 0.002917 0.024306
GO:0090304 nucleic acid metabolic process 6.15% (4/65) 2.82 0.002491 0.024914
GO:0006725 cellular aromatic compound metabolic process 6.15% (4/65) 2.26 0.00986 0.025068
GO:0006396 RNA processing 3.08% (2/65) 3.72 0.010113 0.025282
GO:0005524 ATP binding 7.69% (5/65) 2.3 0.003506 0.026297
GO:0044087 regulation of cellular component biogenesis 1.54% (1/65) 6.42 0.011617 0.026402
GO:0006338 chromatin remodeling 1.54% (1/65) 6.42 0.011617 0.026402
GO:0030684 preribosome 1.54% (1/65) 6.42 0.011617 0.026402
GO:0016070 RNA metabolic process 4.62% (3/65) 2.71 0.010892 0.026783
GO:0046483 heterocycle metabolic process 6.15% (4/65) 2.21 0.011075 0.026794
GO:1901360 organic cyclic compound metabolic process 6.15% (4/65) 2.19 0.011457 0.027279
GO:0003676 nucleic acid binding 9.23% (6/65) 2.03 0.003474 0.02743
GO:0000166 nucleotide binding 7.69% (5/65) 1.83 0.013336 0.029418
GO:1901265 nucleoside phosphate binding 7.69% (5/65) 1.83 0.013336 0.029418
GO:0030554 adenyl nucleotide binding 7.69% (5/65) 2.21 0.004541 0.029613
GO:0034660 ncRNA metabolic process 3.08% (2/65) 3.47 0.014155 0.029905
GO:0043168 anion binding 7.69% (5/65) 1.81 0.014002 0.030005
GO:0051128 regulation of cellular component organization 1.54% (1/65) 6.1 0.0145 0.030209
GO:0032559 adenyl ribonucleotide binding 7.69% (5/65) 2.22 0.004439 0.030263
GO:0034641 cellular nitrogen compound metabolic process 6.15% (4/65) 2.11 0.013931 0.030285
GO:0008144 drug binding 7.69% (5/65) 2.23 0.004289 0.030632
GO:0036094 small molecule binding 7.69% (5/65) 1.79 0.014925 0.030668
GO:0016043 cellular component organization 3.08% (2/65) 3.36 0.016397 0.033238
GO:0006284 base-excision repair 1.54% (1/65) 5.84 0.017375 0.034751
GO:0071840 cellular component organization or biogenesis 3.08% (2/65) 3.29 0.01781 0.035152
GO:0003677 DNA binding 4.62% (3/65) 2.32 0.022357 0.043553
GO:0003916 DNA topoisomerase activity 1.54% (1/65) 5.42 0.023101 0.043862
GO:0048523 negative regulation of cellular process 1.54% (1/65) 5.42 0.023101 0.043862
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_46 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_48 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_53 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_59 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_61 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_63 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_72 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_77 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_89 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_95 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_97 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_117 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_129 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.041 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_175 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_176 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_214 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_244 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_246 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_249 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.02 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_10 0.036 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_69 0.023 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_75 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_62 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.03 Gene family Compare
Oryza sativa HCCA cluster Cluster_123 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_132 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_155 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_161 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_182 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_195 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_261 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_293 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_9 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_164 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_269 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_275 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_301 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_306 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_339 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_399 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_407 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_463 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_488 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_758 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_26 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_36 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_42 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_45 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_52 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_61 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_71 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_73 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_76 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_79 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_108 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_136 0.027 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_142 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_149 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_156 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_165 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_170 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_183 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_186 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_201 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_14 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_80 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_108 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_121 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_141 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_152 0.03 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_173 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_185 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_189 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_197 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_231 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_236 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_268 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_272 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_301 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_302 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_71 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_85 0.033 Gene family Compare
Vitis vinifera HCCA cluster Cluster_104 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_121 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_122 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_148 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_149 0.034 Gene family Compare
Vitis vinifera HCCA cluster Cluster_162 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_164 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_182 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_210 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_220 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_225 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_230 0.023 Gene family Compare
Vitis vinifera HCCA cluster Cluster_231 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_172 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_188 0.029 Gene family Compare
Zea mays HCCA cluster Cluster_221 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_271 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_330 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_331 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_346 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_352 0.028 Gene family Compare
Sequences (65) (download table)

InterPro Domains

GO Terms

Family Terms