Coexpression cluster: Cluster_231 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0090304 nucleic acid metabolic process 10.3% (24/233) 2.88 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 11.59% (27/233) 2.56 0.0 0.0
GO:0003676 nucleic acid binding 16.74% (39/233) 2.0 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 11.59% (27/233) 2.53 0.0 0.0
GO:0046483 heterocycle metabolic process 11.59% (27/233) 2.57 0.0 0.0
GO:0016070 RNA metabolic process 8.15% (19/233) 3.16 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 10.73% (25/233) 2.58 0.0 0.0
GO:0140098 catalytic activity, acting on RNA 6.44% (15/233) 3.25 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 11.59% (27/233) 2.13 0.0 0.0
GO:1901363 heterocyclic compound binding 26.61% (62/233) 1.2 0.0 0.0
GO:0097159 organic cyclic compound binding 26.61% (62/233) 1.2 0.0 0.0
GO:0140640 catalytic activity, acting on a nucleic acid 7.3% (17/233) 2.88 0.0 0.0
GO:0016874 ligase activity 4.29% (10/233) 3.99 0.0 0.0
GO:0016875 ligase activity, forming carbon-oxygen bonds 3.43% (8/233) 4.62 0.0 0.0
GO:0043038 amino acid activation 3.43% (8/233) 4.62 0.0 0.0
GO:0043039 tRNA aminoacylation 3.43% (8/233) 4.62 0.0 0.0
GO:0004812 aminoacyl-tRNA ligase activity 3.43% (8/233) 4.62 0.0 0.0
GO:0140101 catalytic activity, acting on a tRNA 3.86% (9/233) 4.13 0.0 0.0
GO:0034660 ncRNA metabolic process 4.29% (10/233) 3.81 0.0 0.0
GO:0006399 tRNA metabolic process 3.86% (9/233) 3.98 0.0 0.0
GO:0005488 binding 34.33% (80/233) 0.85 0.0 1e-06
GO:0006418 tRNA aminoacylation for protein translation 3.0% (7/233) 4.5 0.0 1e-06
GO:0008173 RNA methyltransferase activity 2.15% (5/233) 5.57 0.0 1e-06
GO:0035639 purine ribonucleoside triphosphate binding 13.3% (31/233) 1.52 0.0 2e-06
GO:0003723 RNA binding 4.72% (11/233) 3.02 0.0 2e-06
GO:0003690 double-stranded DNA binding 2.58% (6/233) 4.59 0.0 3e-06
GO:0006520 amino acid metabolic process 3.43% (8/233) 3.23 3e-06 3.7e-05
GO:0006396 RNA processing 3.43% (8/233) 3.21 3e-06 4e-05
GO:0017076 purine nucleotide binding 14.16% (33/233) 1.24 4e-06 5.5e-05
GO:0032555 purine ribonucleotide binding 13.73% (32/233) 1.26 5e-06 6.2e-05
GO:0032553 ribonucleotide binding 13.73% (32/233) 1.25 5e-06 7e-05
GO:0097367 carbohydrate derivative binding 13.73% (32/233) 1.24 6e-06 7.6e-05
GO:0033036 macromolecule localization 3.0% (7/233) 3.26 9e-06 9.2e-05
GO:0045184 establishment of protein localization 3.0% (7/233) 3.26 9e-06 9.2e-05
GO:0070727 cellular macromolecule localization 3.0% (7/233) 3.26 9e-06 9.2e-05
GO:0008104 protein localization 3.0% (7/233) 3.26 9e-06 9.2e-05
GO:0005525 GTP binding 3.43% (8/233) 3.01 8e-06 9.4e-05
GO:0032561 guanyl ribonucleotide binding 3.43% (8/233) 3.01 8e-06 9.4e-05
GO:0019001 guanyl nucleotide binding 3.43% (8/233) 2.96 1e-05 9.6e-05
GO:1901265 nucleoside phosphate binding 14.16% (33/233) 1.19 9e-06 9.7e-05
GO:0000166 nucleotide binding 14.16% (33/233) 1.19 9e-06 9.7e-05
GO:0015031 protein transport 3.0% (7/233) 3.29 9e-06 9.8e-05
GO:0036094 small molecule binding 14.16% (33/233) 1.13 1.9e-05 0.000175
GO:0003697 single-stranded DNA binding 1.29% (3/233) 5.76 1.9e-05 0.000177
GO:0071705 nitrogen compound transport 3.0% (7/233) 3.03 2.7e-05 0.000218
GO:0006082 organic acid metabolic process 3.86% (9/233) 2.56 2.6e-05 0.000221
GO:0043168 anion binding 13.73% (32/233) 1.13 2.6e-05 0.000223
GO:0019752 carboxylic acid metabolic process 3.86% (9/233) 2.56 2.6e-05 0.000225
GO:0043436 oxoacid metabolic process 3.86% (9/233) 2.56 2.6e-05 0.000225
GO:0044281 small molecule metabolic process 4.72% (11/233) 2.17 4.1e-05 0.000328
GO:0051641 cellular localization 3.0% (7/233) 2.92 4.3e-05 0.000338
GO:0071702 organic substance transport 3.0% (7/233) 2.84 6.2e-05 0.000479
GO:0009987 cellular process 19.74% (46/233) 0.82 8.7e-05 0.000659
GO:0003674 molecular_function 44.21% (103/233) 0.45 9.7e-05 0.000719
GO:0005524 ATP binding 9.87% (23/233) 1.23 0.000146 0.001064
GO:0043167 ion binding 17.17% (40/233) 0.85 0.000193 0.001386
GO:0042168 heme metabolic process 0.86% (2/233) 6.18 0.0003 0.002119
GO:0008168 methyltransferase activity 3.0% (7/233) 2.42 0.000373 0.002585
GO:0044237 cellular metabolic process 14.59% (34/233) 0.89 0.000389 0.002648
GO:0042440 pigment metabolic process 0.86% (2/233) 5.92 0.000449 0.003008
GO:0016741 transferase activity, transferring one-carbon groups 3.0% (7/233) 2.36 0.000477 0.003145
GO:0003677 DNA binding 6.01% (14/233) 1.45 0.000718 0.004655
GO:0071586 CAAX-box protein processing 0.86% (2/233) 5.5 0.000832 0.005309
GO:0030554 adenyl nucleotide binding 10.73% (25/233) 0.95 0.001277 0.008019
GO:0006778 porphyrin-containing compound metabolic process 0.86% (2/233) 5.18 0.001327 0.008085
GO:0004197 cysteine-type endopeptidase activity 0.86% (2/233) 5.18 0.001327 0.008085
GO:0032559 adenyl ribonucleotide binding 10.3% (24/233) 0.95 0.001592 0.009555
GO:0030983 mismatched DNA binding 0.86% (2/233) 5.04 0.001616 0.009556
GO:0006298 mismatch repair 0.86% (2/233) 4.92 0.001933 0.01126
GO:0008150 biological_process 25.75% (60/233) 0.5 0.002592 0.014887
GO:0006807 nitrogen compound metabolic process 14.59% (34/233) 0.71 0.002967 0.016798
GO:0043170 macromolecule metabolic process 13.73% (32/233) 0.73 0.003165 0.01767
GO:0033013 tetrapyrrole metabolic process 0.86% (2/233) 4.41 0.003911 0.021244
GO:0016485 protein processing 0.86% (2/233) 4.41 0.003911 0.021244
GO:0046434 organophosphate catabolic process 0.86% (2/233) 4.33 0.004383 0.023495
GO:0004820 glycine-tRNA ligase activity 0.43% (1/233) 7.5 0.005523 0.027752
GO:0006426 glycyl-tRNA aminoacylation 0.43% (1/233) 7.5 0.005523 0.027752
GO:0006423 cysteinyl-tRNA aminoacylation 0.43% (1/233) 7.5 0.005523 0.027752
GO:0004817 cysteine-tRNA ligase activity 0.43% (1/233) 7.5 0.005523 0.027752
GO:0051604 protein maturation 0.86% (2/233) 4.18 0.005404 0.028585
GO:0006259 DNA metabolic process 2.15% (5/233) 2.13 0.00603 0.029929
GO:0005737 cytoplasm 1.29% (3/233) 2.98 0.006664 0.032669
GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen 0.43% (1/233) 6.5 0.011015 0.049201
GO:0017038 protein import 0.43% (1/233) 6.5 0.011015 0.049201
GO:0004392 heme oxygenase (decyclizing) activity 0.43% (1/233) 6.5 0.011015 0.049201
GO:0004325 ferrochelatase activity 0.43% (1/233) 6.5 0.011015 0.049201
GO:0004827 proline-tRNA ligase activity 0.43% (1/233) 6.5 0.011015 0.049201
GO:0006433 prolyl-tRNA aminoacylation 0.43% (1/233) 6.5 0.011015 0.049201
GO:0006788 heme oxidation 0.43% (1/233) 6.5 0.011015 0.049201
GO:0004019 adenylosuccinate synthase activity 0.43% (1/233) 6.5 0.011015 0.049201
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_101 0.025 OrthoFinder output from all 39 species Compare
Amborella trichopoda HCCA Cluster_180 0.004 OrthoFinder output from all 39 species Compare
Amborella trichopoda HCCA Cluster_203 0.004 OrthoFinder output from all 39 species Compare
Amborella trichopoda HCCA Cluster_213 0.004 OrthoFinder output from all 39 species Compare
Amborella trichopoda HCCA Cluster_218 0.004 OrthoFinder output from all 39 species Compare
Amborella trichopoda HCCA Cluster_231 0.004 OrthoFinder output from all 39 species Compare
Amborella trichopoda HCCA Cluster_243 0.006 OrthoFinder output from all 39 species Compare
Arabidopsis thaliana HCCA Cluster_117 0.006 OrthoFinder output from all 39 species Compare
Arabidopsis thaliana HCCA Cluster_134 0.01 OrthoFinder output from all 39 species Compare
Arabidopsis thaliana HCCA Cluster_177 0.01 OrthoFinder output from all 39 species Compare
Arabidopsis thaliana HCCA Cluster_185 0.006 OrthoFinder output from all 39 species Compare
Arabidopsis thaliana HCCA Cluster_232 0.003 OrthoFinder output from all 39 species Compare
Arabidopsis thaliana HCCA Cluster_247 0.007 OrthoFinder output from all 39 species Compare
Arabidopsis thaliana HCCA Cluster_284 0.004 OrthoFinder output from all 39 species Compare
Gingko biloba HCCA Cluster_125 0.006 OrthoFinder output from all 39 species Compare
Gingko biloba HCCA Cluster_128 0.004 OrthoFinder output from all 39 species Compare
Gingko biloba HCCA Cluster_228 0.004 OrthoFinder output from all 39 species Compare
Marchantia polymorpha HCCA Cluster_64 0.006 OrthoFinder output from all 39 species Compare
Oryza sativa HCCA Cluster_52 0.005 OrthoFinder output from all 39 species Compare
Oryza sativa HCCA Cluster_116 0.007 OrthoFinder output from all 39 species Compare
Oryza sativa HCCA Cluster_224 0.004 OrthoFinder output from all 39 species Compare
Oryza sativa HCCA Cluster_240 0.004 OrthoFinder output from all 39 species Compare
Oryza sativa HCCA Cluster_262 0.004 OrthoFinder output from all 39 species Compare
Oryza sativa HCCA Cluster_310 0.004 OrthoFinder output from all 39 species Compare
Oryza sativa HCCA Cluster_346 0.004 OrthoFinder output from all 39 species Compare
Oryza sativa HCCA Cluster_355 0.004 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_101 0.007 OrthoFinder output from all 39 species Compare
Selaginella moellendorffii HCCA Cluster_199 0.004 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_8 0.004 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_26 0.006 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_133 0.018 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_153 0.011 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_224 0.008 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_272 0.004 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_44 0.01 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_51 0.007 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_55 0.004 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_142 0.011 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_148 0.004 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_157 0.007 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_177 0.006 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_201 0.014 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_203 0.007 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_234 0.003 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_11 0.08 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_28 0.038 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_41 0.004 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_75 0.004 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_98 0.004 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_100 0.005 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_114 0.104 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_124 0.015 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_146 0.006 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_188 0.01 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_202 0.007 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_209 0.075 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_213 0.028 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_221 0.006 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_228 0.004 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_234 0.02 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_244 0.004 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_255 0.007 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_258 0.011 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_270 0.005 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_272 0.004 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_285 0.005 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_296 0.004 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_305 0.004 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_310 0.006 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_318 0.004 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_319 0.029 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_322 0.032 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_328 0.003 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_331 0.003 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_343 0.003 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_350 0.003 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_359 0.004 OrthoFinder output from all 39 species Compare
Picea abies HCCA Cluster_358 0.003 OrthoFinder output from all 39 species Compare
Abrodictyum obscurum HCCA Cluster_275 0.005 OrthoFinder output from all 39 species Compare
Adiantum latifolium HCCA Cluster_319 0.003 OrthoFinder output from all 39 species Compare
Alsophila latebrosa HCCA Cluster_440 0.004 OrthoFinder output from all 39 species Compare
Alsophila latebrosa HCCA Cluster_654 0.004 OrthoFinder output from all 39 species Compare
Amblovenatum opulentum HCCA Cluster_155 0.005 OrthoFinder output from all 39 species Compare
Amblovenatum opulentum HCCA Cluster_438 0.005 OrthoFinder output from all 39 species Compare
Equisetum hyemale HCCA Cluster_58 0.005 OrthoFinder output from all 39 species Compare
Equisetum hyemale HCCA Cluster_142 0.004 OrthoFinder output from all 39 species Compare
Equisetum hyemale HCCA Cluster_193 0.004 OrthoFinder output from all 39 species Compare
Lindsaea ensifolia HCCA Cluster_201 0.005 OrthoFinder output from all 39 species Compare
Nephrolepis biserrata HCCA Cluster_430 0.004 OrthoFinder output from all 39 species Compare
Pleocnemia irregularis HCCA Cluster_97 0.006 OrthoFinder output from all 39 species Compare
Pleocnemia irregularis HCCA Cluster_365 0.004 OrthoFinder output from all 39 species Compare
Pleocnemia irregularis HCCA Cluster_412 0.004 OrthoFinder output from all 39 species Compare
Pleocnemia irregularis HCCA Cluster_420 0.004 OrthoFinder output from all 39 species Compare
Psilotum nudum HCCA Cluster_129 0.004 OrthoFinder output from all 39 species Compare
Psilotum nudum HCCA Cluster_268 0.004 OrthoFinder output from all 39 species Compare
Salvinia molesta HCCA Cluster_576 0.004 OrthoFinder output from all 39 species Compare
Tectaria incisa HCCA Cluster_384 0.004 OrthoFinder output from all 39 species Compare
Alsophila spinulosa HCCA Cluster_424 0.004 OrthoFinder output from all 39 species Compare
Lygodium flexuosum HCCA Cluster_117 0.003 OrthoFinder output from all 39 species Compare
Lygodium flexuosum HCCA Cluster_155 0.006 OrthoFinder output from all 39 species Compare
Lygodium flexuosum HCCA Cluster_260 0.004 OrthoFinder output from all 39 species Compare
Lygodium flexuosum HCCA Cluster_395 0.004 OrthoFinder output from all 39 species Compare
Azolla filiculoides HCCA Cluster_138 0.006 OrthoFinder output from all 39 species Compare
Actinostachys digitata HCCA Cluster_93 0.005 OrthoFinder output from all 39 species Compare
Actinostachys digitata HCCA Cluster_326 0.004 OrthoFinder output from all 39 species Compare
Sequences (233) (download table)

InterPro Domains

GO Terms

Family Terms