Coexpression cluster: Cluster_256 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043039 tRNA aminoacylation 4.48% (3/67) 5.0 0.000117 0.003433
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.48% (3/67) 5.0 0.000117 0.003433
GO:0043038 amino acid activation 4.48% (3/67) 5.0 0.000117 0.003433
GO:0004812 aminoacyl-tRNA ligase activity 4.48% (3/67) 5.0 0.000117 0.003433
GO:0140101 catalytic activity, acting on a tRNA 4.48% (3/67) 4.36 0.000435 0.010645
GO:0006399 tRNA metabolic process 4.48% (3/67) 4.2 0.000604 0.012691
GO:0044265 cellular macromolecule catabolic process 4.48% (3/67) 4.01 0.000875 0.014291
GO:0006418 tRNA aminoacylation for protein translation 4.48% (3/67) 5.08 0.0001 0.014686
GO:0016874 ligase activity 4.48% (3/67) 4.05 0.000812 0.014912
GO:0009057 macromolecule catabolic process 4.48% (3/67) 3.86 0.001186 0.015846
GO:0034660 ncRNA metabolic process 4.48% (3/67) 3.87 0.00116 0.017048
GO:0044248 cellular catabolic process 4.48% (3/67) 3.71 0.00159 0.017978
GO:0006520 cellular amino acid metabolic process 4.48% (3/67) 3.72 0.001559 0.019092
GO:0009892 negative regulation of metabolic process 2.99% (2/67) 4.54 0.003371 0.029147
GO:0010605 negative regulation of macromolecule metabolic process 2.99% (2/67) 4.54 0.003371 0.029147
GO:0010629 negative regulation of gene expression 2.99% (2/67) 4.68 0.002784 0.029235
GO:0016070 RNA metabolic process 5.97% (4/67) 2.71 0.003328 0.032618
GO:0048519 negative regulation of biological process 2.99% (2/67) 4.25 0.004991 0.034938
GO:0009056 catabolic process 4.48% (3/67) 3.09 0.005375 0.035916
GO:1901575 organic substance catabolic process 4.48% (3/67) 3.14 0.004919 0.036155
GO:0006658 phosphatidylserine metabolic process 1.49% (1/67) 7.71 0.004757 0.036803
GO:0006659 phosphatidylserine biosynthetic process 1.49% (1/67) 7.71 0.004757 0.036803
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA 1.49% (1/67) 7.3 0.006337 0.037264
GO:0110156 methylguanosine-cap decapping 1.49% (1/67) 7.3 0.006337 0.037264
GO:0110154 RNA decapping 1.49% (1/67) 7.3 0.006337 0.037264
GO:0019941 modification-dependent protein catabolic process 2.99% (2/67) 3.84 0.00871 0.04001
GO:0006511 ubiquitin-dependent protein catabolic process 2.99% (2/67) 3.84 0.00871 0.04001
GO:0043632 modification-dependent macromolecule catabolic process 2.99% (2/67) 3.84 0.00871 0.04001
GO:0044093 positive regulation of molecular function 1.49% (1/67) 6.98 0.007916 0.043096
GO:0043085 positive regulation of catalytic activity 1.49% (1/67) 6.98 0.007916 0.043096
GO:0006082 organic acid metabolic process 4.48% (3/67) 2.77 0.009748 0.043423
GO:0019752 carboxylic acid metabolic process 4.48% (3/67) 2.84 0.008642 0.043807
GO:0043436 oxoacid metabolic process 4.48% (3/67) 2.84 0.008642 0.043807
GO:0006402 mRNA catabolic process 1.49% (1/67) 6.49 0.011065 0.043959
GO:0000956 nuclear-transcribed mRNA catabolic process 1.49% (1/67) 6.49 0.011065 0.043959
GO:0140098 catalytic activity, acting on RNA 4.48% (3/67) 2.74 0.010429 0.045092
GO:0051603 proteolysis involved in cellular protein catabolic process 2.99% (2/67) 3.67 0.010914 0.045841
GO:0006401 RNA catabolic process 1.49% (1/67) 6.3 0.012635 0.047626
GO:0090304 nucleic acid metabolic process 5.97% (4/67) 2.16 0.012406 0.047993
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_129 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_187 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_216 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_294 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_144 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_3 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_22 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_25 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_50 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_52 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_85 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_99 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_130 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_158 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_165 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_198 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_227 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_177 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_118 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_286 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_28 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_128 0.034 Archaeplastida Compare
Vitis vinifera HCCA Cluster_135 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_184 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_198 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_23 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_127 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_194 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_311 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_330 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_129 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_245 0.018 LandPlants Compare
Gingko biloba HCCA Cluster_216 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_261 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_294 0.024 LandPlants Compare
Marchantia polymorpha HCCA Cluster_45 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_105 0.017 LandPlants Compare
Marchantia polymorpha HCCA Cluster_144 0.019 LandPlants Compare
Oryza sativa HCCA Cluster_4 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_22 0.024 LandPlants Compare
Oryza sativa HCCA Cluster_25 0.02 LandPlants Compare
Oryza sativa HCCA Cluster_38 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_50 0.023 LandPlants Compare
Oryza sativa HCCA Cluster_52 0.025 LandPlants Compare
Oryza sativa HCCA Cluster_85 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_99 0.02 LandPlants Compare
Oryza sativa HCCA Cluster_126 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_130 0.02 LandPlants Compare
Oryza sativa HCCA Cluster_158 0.023 LandPlants Compare
Oryza sativa HCCA Cluster_165 0.031 LandPlants Compare
Oryza sativa HCCA Cluster_171 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_198 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_206 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_227 0.021 LandPlants Compare
Oryza sativa HCCA Cluster_239 0.014 LandPlants Compare
Oryza sativa HCCA Cluster_288 0.016 LandPlants Compare
Picea abies HCCA Cluster_205 0.017 LandPlants Compare
Solanum lycopersicum HCCA Cluster_28 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_108 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_128 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_55 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_99 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_166 0.017 LandPlants Compare
Vitis vinifera HCCA Cluster_189 0.017 LandPlants Compare
Zea mays HCCA Cluster_18 0.015 LandPlants Compare
Zea mays HCCA Cluster_23 0.016 LandPlants Compare
Zea mays HCCA Cluster_127 0.018 LandPlants Compare
Zea mays HCCA Cluster_260 0.015 LandPlants Compare
Amborella trichopoda HCCA Cluster_20 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_45 0.012 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_117 0.012 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_129 0.017 SeedPlants Compare
Oryza sativa HCCA Cluster_3 0.013 SeedPlants Compare
Oryza sativa HCCA Cluster_4 0.016 SeedPlants Compare
Oryza sativa HCCA Cluster_13 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_22 0.024 SeedPlants Compare
Oryza sativa HCCA Cluster_25 0.02 SeedPlants Compare
Oryza sativa HCCA Cluster_38 0.017 SeedPlants Compare
Oryza sativa HCCA Cluster_50 0.019 SeedPlants Compare
Oryza sativa HCCA Cluster_52 0.016 SeedPlants Compare
Oryza sativa HCCA Cluster_99 0.016 SeedPlants Compare
Oryza sativa HCCA Cluster_130 0.02 SeedPlants Compare
Oryza sativa HCCA Cluster_158 0.023 SeedPlants Compare
Oryza sativa HCCA Cluster_165 0.031 SeedPlants Compare
Oryza sativa HCCA Cluster_171 0.017 SeedPlants Compare
Oryza sativa HCCA Cluster_198 0.015 SeedPlants Compare
Oryza sativa HCCA Cluster_206 0.015 SeedPlants Compare
Oryza sativa HCCA Cluster_218 0.013 SeedPlants Compare
Oryza sativa HCCA Cluster_227 0.021 SeedPlants Compare
Oryza sativa HCCA Cluster_239 0.014 SeedPlants Compare
Oryza sativa HCCA Cluster_280 0.013 SeedPlants Compare
Oryza sativa HCCA Cluster_288 0.016 SeedPlants Compare
Oryza sativa HCCA Cluster_322 0.013 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_28 0.016 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_126 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_128 0.016 SeedPlants Compare
Vitis vinifera HCCA Cluster_55 0.016 SeedPlants Compare
Zea mays HCCA Cluster_74 0.013 SeedPlants Compare
Zea mays HCCA Cluster_127 0.018 SeedPlants Compare
Zea mays HCCA Cluster_260 0.015 SeedPlants Compare
Zea mays HCCA Cluster_330 0.014 SeedPlants Compare
Sequences (67) (download table)

InterPro Domains

GO Terms

Family Terms