Coexpression cluster: Cluster_59 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009890 negative regulation of biosynthetic process 8.86% (7/79) 2.56 0.00019 0.007346
GO:0006479 protein methylation 7.59% (6/79) 2.86 0.000184 0.007588
GO:0008213 protein alkylation 7.59% (6/79) 2.86 0.000184 0.007588
GO:0031327 negative regulation of cellular biosynthetic process 8.86% (7/79) 2.57 0.000179 0.008404
GO:0016571 histone methylation 7.59% (6/79) 2.87 0.000174 0.008823
GO:0051567 histone H3-K9 methylation 6.33% (5/79) 3.28 0.000168 0.009205
GO:0061647 histone H3-K9 modification 6.33% (5/79) 3.28 0.000168 0.009205
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 8.86% (7/79) 2.6 0.000161 0.010583
GO:0006259 DNA metabolic process 11.39% (9/79) 2.06 0.000296 0.01083
GO:0010558 negative regulation of macromolecule biosynthetic process 8.86% (7/79) 2.61 0.000153 0.011229
GO:0016569 covalent chromatin modification 8.86% (7/79) 2.61 0.000153 0.011229
GO:2000113 negative regulation of cellular macromolecule biosynthetic process 8.86% (7/79) 2.61 0.000153 0.011229
GO:0005634 nucleus 53.16% (42/79) 0.65 0.000338 0.011739
GO:0006346 methylation-dependent chromatin silencing 5.06% (4/79) 3.58 0.00036 0.01185
GO:0099513 polymeric cytoskeletal fiber 3.8% (3/79) 4.19 0.000605 0.012851
GO:0099081 supramolecular polymer 3.8% (3/79) 4.19 0.000605 0.012851
GO:0099080 supramolecular complex 3.8% (3/79) 4.19 0.000605 0.012851
GO:0099512 supramolecular fiber 3.8% (3/79) 4.19 0.000605 0.012851
GO:0045814 negative regulation of gene expression, epigenetic 6.33% (5/79) 2.86 0.000635 0.013085
GO:0051172 negative regulation of nitrogen compound metabolic process 8.86% (7/79) 2.37 0.00042 0.013171
GO:0018022 peptidyl-lysine methylation 6.33% (5/79) 2.91 0.000555 0.014072
GO:0051276 chromosome organization 6.33% (5/79) 2.91 0.000544 0.01435
GO:0034968 histone lysine methylation 6.33% (5/79) 2.91 0.000544 0.01435
GO:0051253 negative regulation of RNA metabolic process 8.86% (7/79) 2.64 0.000133 0.014633
GO:0006342 chromatin silencing 6.33% (5/79) 2.88 0.0006 0.014645
GO:0031324 negative regulation of cellular metabolic process 8.86% (7/79) 2.31 0.000531 0.015221
GO:0016570 histone modification 7.59% (6/79) 2.57 0.00053 0.01588
GO:0045892 negative regulation of transcription, DNA-templated 8.86% (7/79) 2.66 0.000121 0.015954
GO:1903507 negative regulation of nucleic acid-templated transcription 8.86% (7/79) 2.66 0.000121 0.015954
GO:1902679 negative regulation of RNA biosynthetic process 8.86% (7/79) 2.66 0.000121 0.015954
GO:0006325 chromatin organization 8.86% (7/79) 2.2 0.000825 0.016469
GO:0022402 cell cycle process 8.86% (7/79) 2.16 0.000981 0.01902
GO:0010629 negative regulation of gene expression 8.86% (7/79) 2.13 0.001102 0.020748
GO:0040029 regulation of gene expression, epigenetic 6.33% (5/79) 2.64 0.001271 0.023271
GO:0010332 response to gamma radiation 3.8% (3/79) 3.79 0.001344 0.023939
GO:0090304 nucleic acid metabolic process 17.72% (14/79) 1.28 0.001622 0.028126
GO:0007129 synapsis 3.8% (3/79) 3.68 0.001677 0.028343
GO:0051171 regulation of nitrogen compound metabolic process 18.99% (15/79) 1.2 0.001914 0.030037
GO:0016458 gene silencing 6.33% (5/79) 2.51 0.001882 0.030244
GO:0070192 chromosome organization involved in meiotic cell cycle 3.8% (3/79) 3.63 0.001862 0.030671
GO:0010605 negative regulation of macromolecule metabolic process 8.86% (7/79) 1.95 0.002227 0.034136
GO:0010212 response to ionizing radiation 3.8% (3/79) 3.48 0.002489 0.035653
GO:0019219 regulation of nucleobase-containing compound metabolic process 17.72% (14/79) 1.22 0.002444 0.035791
GO:0042138 meiotic DNA double-strand break formation 3.8% (3/79) 3.5 0.002413 0.036146
GO:0032259 methylation 10.13% (8/79) 2.44 0.000115 0.038011
GO:0043414 macromolecule methylation 10.13% (8/79) 2.44 0.000115 0.038011
GO:0047184 1-acylglycerophosphocholine O-acyltransferase activity 1.27% (1/79) 8.44 0.002885 0.038802
GO:0031326 regulation of cellular biosynthetic process 17.72% (14/79) 1.19 0.002945 0.038815
GO:0006139 nucleobase-containing compound metabolic process 20.25% (16/79) 1.08 0.003087 0.039122
GO:0009892 negative regulation of metabolic process 8.86% (7/79) 1.89 0.002865 0.03933
GO:0051052 regulation of DNA metabolic process 5.06% (4/79) 2.78 0.002806 0.039338
GO:0018205 peptidyl-lysine modification 6.33% (5/79) 2.35 0.00305 0.039409
GO:0061982 meiosis I cell cycle process 3.8% (3/79) 3.34 0.003323 0.041312
GO:0031323 regulation of cellular metabolic process 18.99% (15/79) 1.09 0.003907 0.046816
GO:0098813 nuclear chromosome segregation 3.8% (3/79) 3.24 0.003997 0.047031
GO:0045132 meiotic chromosome segregation 3.8% (3/79) 3.25 0.003896 0.047541
GO:0031047 gene silencing by RNA 5.06% (4/79) 2.62 0.004187 0.048407
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_1 0.03 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_15 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_21 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_25 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_29 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_31 0.023 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_34 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_35 0.027 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_39 0.032 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_43 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_47 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_49 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_53 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_54 0.029 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_55 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_58 0.03 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_62 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_65 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_68 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_79 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_83 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_84 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_86 0.023 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_91 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_93 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_107 0.023 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_111 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_113 0.038 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_117 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_121 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_123 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_124 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_134 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_159 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_165 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_170 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_172 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_175 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_177 0.023 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_181 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_184 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_207 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_210 0.035 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_212 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_216 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_223 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_227 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_232 0.034 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_235 0.038 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_252 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_260 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_269 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_273 0.023 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_274 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_313 0.019 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_94 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_114 0.016 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_178 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_60 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_29 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_54 0.027 Gene family Compare
Oryza sativa HCCA cluster Cluster_55 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_72 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_78 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_171 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_177 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_182 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_189 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_199 0.03 Gene family Compare
Oryza sativa HCCA cluster Cluster_225 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_246 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_256 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_264 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_266 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_289 0.029 Gene family Compare
Oryza sativa HCCA cluster Cluster_333 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_335 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_57 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_87 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_104 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_251 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_306 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_345 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_350 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_358 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_458 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_575 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_3 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_55 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_73 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_103 0.021 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_104 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_124 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_132 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_156 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_165 0.024 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_185 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_19 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_73 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_89 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_99 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_100 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_134 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_145 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_150 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_161 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_166 0.037 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_179 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_185 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_200 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_219 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_231 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_236 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_282 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_294 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_309 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_2 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_21 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_42 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_57 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_58 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_91 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_118 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_119 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_125 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_145 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_149 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_158 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_162 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_182 0.03 Gene family Compare
Vitis vinifera HCCA cluster Cluster_189 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_198 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_202 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_205 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_208 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_229 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_242 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_6 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_37 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_43 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_56 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_92 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_101 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_126 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_131 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_173 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_183 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_185 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_189 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_211 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_222 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_241 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_243 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_253 0.026 Gene family Compare
Zea mays HCCA cluster Cluster_278 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_288 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_295 0.026 Gene family Compare
Zea mays HCCA cluster Cluster_299 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_308 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_333 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_341 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_346 0.025 Gene family Compare
Zea mays HCCA cluster Cluster_354 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_355 0.014 Gene family Compare
Sequences (79) (download table)

InterPro Domains

GO Terms

Family Terms