Coexpression cluster: Cluster_235 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0046578 regulation of Ras protein signal transduction 2.17% (2/92) 8.6 1e-05 0.000497
GO:0051056 regulation of small GTPase mediated signal transduction 2.17% (2/92) 8.6 1e-05 0.000497
GO:0005086 ARF guanyl-nucleotide exchange factor activity 2.17% (2/92) 8.6 1e-05 0.000497
GO:1902531 regulation of intracellular signal transduction 2.17% (2/92) 8.6 1e-05 0.000497
GO:0032012 regulation of ARF protein signal transduction 2.17% (2/92) 8.6 1e-05 0.000497
GO:0010646 regulation of cell communication 2.17% (2/92) 7.6 4.6e-05 0.001285
GO:0009966 regulation of signal transduction 2.17% (2/92) 7.6 4.6e-05 0.001285
GO:0023051 regulation of signaling 2.17% (2/92) 7.6 4.6e-05 0.001285
GO:0016192 vesicle-mediated transport 4.35% (4/92) 4.43 3.9e-05 0.001637
GO:0005085 guanyl-nucleotide exchange factor activity 2.17% (2/92) 6.79 0.000149 0.003739
GO:0008408 3'-5' exonuclease activity 2.17% (2/92) 6.69 0.000172 0.003918
GO:0048583 regulation of response to stimulus 2.17% (2/92) 6.51 0.000222 0.004644
GO:0004527 exonuclease activity 2.17% (2/92) 6.35 0.000279 0.005381
GO:0051020 GTPase binding 2.17% (2/92) 6.27 0.000309 0.005548
GO:0006886 intracellular protein transport 3.26% (3/92) 4.43 0.000387 0.005714
GO:0030983 mismatched DNA binding 2.17% (2/92) 6.2 0.000342 0.005718
GO:0006298 mismatch repair 2.17% (2/92) 6.14 0.000376 0.005892
GO:0046907 intracellular transport 3.26% (3/92) 4.2 0.000607 0.008015
GO:0051649 establishment of localization in cell 3.26% (3/92) 4.2 0.000607 0.008015
GO:0048193 Golgi vesicle transport 2.17% (2/92) 5.74 0.000656 0.008235
GO:0004518 nuclease activity 3.26% (3/92) 4.06 0.000807 0.00964
GO:0051641 cellular localization 3.26% (3/92) 3.97 0.000967 0.01103
GO:0008104 protein localization 3.26% (3/92) 3.81 0.001321 0.011056
GO:0033036 macromolecule localization 3.26% (3/92) 3.81 0.001321 0.011056
GO:0019899 enzyme binding 2.17% (2/92) 5.2 0.001376 0.011145
GO:0042886 amide transport 3.26% (3/92) 3.82 0.001299 0.011641
GO:0015031 protein transport 3.26% (3/92) 3.82 0.001299 0.011641
GO:0015833 peptide transport 3.26% (3/92) 3.82 0.001299 0.011641
GO:0045184 establishment of protein localization 3.26% (3/92) 3.82 0.001299 0.011641
GO:0016787 hydrolase activity 10.87% (10/92) 1.62 0.001533 0.012027
GO:0030117 membrane coat 2.17% (2/92) 5.35 0.001128 0.012306
GO:0006890 retrograde vesicle-mediated transport, Golgi to ER 1.09% (1/92) 9.6 0.001293 0.013522
GO:0098796 membrane protein complex 3.26% (3/92) 3.47 0.002623 0.01995
GO:0071705 nitrogen compound transport 3.26% (3/92) 3.43 0.002839 0.020962
GO:0071702 organic substance transport 3.26% (3/92) 3.23 0.00418 0.029974
GO:0043492 ATPase activity, coupled to movement of substances 2.17% (2/92) 4.2 0.00538 0.035537
GO:0042626 ATPase activity, coupled to transmembrane movement of substances 2.17% (2/92) 4.2 0.00538 0.035537
GO:0005975 carbohydrate metabolic process 5.43% (5/92) 2.17 0.00523 0.036467
GO:0006139 nucleobase-containing compound metabolic process 5.43% (5/92) 2.14 0.005727 0.036859
GO:0015399 primary active transmembrane transporter activity 2.17% (2/92) 3.95 0.007538 0.046147
GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity 2.17% (2/92) 3.95 0.007538 0.046147
GO:0044238 primary metabolic process 14.13% (13/92) 1.08 0.007966 0.047607
GO:0006974 cellular response to DNA damage stimulus 2.17% (2/92) 3.66 0.011036 0.047757
GO:0051716 cellular response to stimulus 2.17% (2/92) 3.66 0.011036 0.047757
GO:0033554 cellular response to stress 2.17% (2/92) 3.66 0.011036 0.047757
GO:0016887 ATPase activity 3.26% (3/92) 2.74 0.010485 0.048735
GO:0016278 lysine N-methyltransferase activity 1.09% (1/92) 6.6 0.010297 0.048765
GO:0016279 protein-lysine N-methyltransferase activity 1.09% (1/92) 6.6 0.010297 0.048765
GO:0018024 histone-lysine N-methyltransferase activity 1.09% (1/92) 6.6 0.010297 0.048765
GO:0042054 histone methyltransferase activity 1.09% (1/92) 6.6 0.010297 0.048765
GO:0006725 cellular aromatic compound metabolic process 5.43% (5/92) 1.92 0.010707 0.048862
GO:0034968 histone lysine methylation 1.09% (1/92) 6.79 0.009016 0.049194
GO:0016571 histone methylation 1.09% (1/92) 6.79 0.009016 0.049194
GO:0018022 peptidyl-lysine methylation 1.09% (1/92) 6.79 0.009016 0.049194
GO:0042623 ATPase activity, coupled 2.17% (2/92) 3.87 0.008432 0.04922
GO:0008276 protein methyltransferase activity 1.09% (1/92) 6.43 0.011577 0.04925
GO:0006281 DNA repair 2.17% (2/92) 3.77 0.009532 0.049847
GO:0046483 heterocycle metabolic process 5.43% (5/92) 1.97 0.009351 0.049937
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_7 0.03 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_9 0.023 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_28 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_48 0.034 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_58 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_71 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_92 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_101 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_120 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_127 0.043 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_176 0.029 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_205 0.046 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_223 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_251 0.023 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_105 0.021 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_184 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_199 0.022 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_24 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_99 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_157 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_163 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_26 0.022 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_66 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_106 0.029 Gene family Compare
Oryza sativa HCCA cluster Cluster_274 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_278 0.025 Gene family Compare
Oryza sativa HCCA cluster Cluster_297 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_335 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_57 0.027 Gene family Compare
Picea abies HCCA cluster Cluster_155 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_161 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_204 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_234 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_261 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_302 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_354 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_397 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_411 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_435 0.029 Gene family Compare
Picea abies HCCA cluster Cluster_450 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_454 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_461 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_462 0.031 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_74 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_89 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_96 0.022 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_104 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_106 0.022 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_111 0.022 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_140 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_164 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_165 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_182 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_198 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_31 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_37 0.044 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_45 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_77 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_91 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_128 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_137 0.052 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_147 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_212 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_265 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_270 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_290 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_72 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_82 0.035 Gene family Compare
Vitis vinifera HCCA cluster Cluster_99 0.027 Gene family Compare
Vitis vinifera HCCA cluster Cluster_103 0.038 Gene family Compare
Vitis vinifera HCCA cluster Cluster_118 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_136 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_170 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_215 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_216 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_226 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_231 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_241 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_86 0.039 Gene family Compare
Zea mays HCCA cluster Cluster_136 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_139 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_185 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_186 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_189 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_235 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_266 0.031 Gene family Compare
Zea mays HCCA cluster Cluster_271 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_306 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_320 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_330 0.05 Gene family Compare
Zea mays HCCA cluster Cluster_332 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_338 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_349 0.04 Gene family Compare
Sequences (92) (download table)

InterPro Domains

GO Terms

Family Terms