Coexpression cluster: Cluster_183 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044271 cellular nitrogen compound biosynthetic process 11.2% (14/125) 3.11 0.0 0.0
GO:0009059 macromolecule biosynthetic process 10.4% (13/125) 3.12 0.0 0.0
GO:0005198 structural molecule activity 8.0% (10/125) 3.41 0.0 1e-06
GO:0043232 intracellular non-membrane-bounded organelle 8.0% (10/125) 3.44 0.0 1e-06
GO:0043228 non-membrane-bounded organelle 8.0% (10/125) 3.44 0.0 1e-06
GO:0043603 cellular amide metabolic process 8.0% (10/125) 3.42 0.0 1e-06
GO:0043604 amide biosynthetic process 8.0% (10/125) 3.47 0.0 1e-06
GO:0043043 peptide biosynthetic process 8.0% (10/125) 3.48 0.0 1e-06
GO:0006518 peptide metabolic process 8.0% (10/125) 3.44 0.0 1e-06
GO:0003735 structural constituent of ribosome 8.0% (10/125) 3.51 0.0 1e-06
GO:0034641 cellular nitrogen compound metabolic process 13.6% (17/125) 2.4 0.0 1e-06
GO:0034645 cellular macromolecule biosynthetic process 9.6% (12/125) 3.12 0.0 1e-06
GO:0006412 translation 8.0% (10/125) 3.52 0.0 1e-06
GO:0005840 ribosome 8.0% (10/125) 3.59 0.0 1e-06
GO:0044249 cellular biosynthetic process 11.2% (14/125) 2.51 0.0 3e-06
GO:1901576 organic substance biosynthetic process 11.2% (14/125) 2.43 0.0 5e-06
GO:0009058 biosynthetic process 11.2% (14/125) 2.27 1e-06 1.7e-05
GO:0043229 intracellular organelle 8.8% (11/125) 2.68 1e-06 1.7e-05
GO:0043226 organelle 8.8% (11/125) 2.68 1e-06 1.7e-05
GO:0005622 intracellular anatomical structure 8.8% (11/125) 2.66 2e-06 1.9e-05
GO:1901566 organonitrogen compound biosynthetic process 8.0% (10/125) 2.82 2e-06 2e-05
GO:0005575 cellular_component 15.2% (19/125) 1.22 0.000493 0.005334
GO:0006605 protein targeting 1.6% (2/125) 5.59 0.000774 0.008011
GO:0110165 cellular anatomical entity 12.8% (16/125) 1.22 0.001426 0.014139
GO:0006886 intracellular protein transport 2.4% (3/125) 3.54 0.002245 0.02137
GO:0051382 kinetochore assembly 0.8% (1/125) 8.4 0.002963 0.024316
GO:0051383 kinetochore organization 0.8% (1/125) 8.4 0.002963 0.024316
GO:0034998 oligosaccharyltransferase I complex 0.8% (1/125) 8.4 0.002963 0.024316
GO:0034654 nucleobase-containing compound biosynthetic process 3.2% (4/125) 2.79 0.002775 0.0254
GO:0003712 transcription coregulator activity 1.6% (2/125) 4.54 0.003355 0.026618
GO:0044260 cellular macromolecule metabolic process 12.8% (16/125) 1.09 0.003547 0.027233
GO:0051649 establishment of localization in cell 2.4% (3/125) 3.24 0.004027 0.029043
GO:0046907 intracellular transport 2.4% (3/125) 3.24 0.004027 0.029043
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 1.6% (2/125) 4.11 0.006007 0.03249
GO:0019438 aromatic compound biosynthetic process 3.2% (4/125) 2.48 0.005955 0.032962
GO:0016070 RNA metabolic process 4.0% (5/125) 2.13 0.005923 0.033562
GO:0042886 amide transport 2.4% (3/125) 2.96 0.00691 0.033563
GO:0015031 protein transport 2.4% (3/125) 2.96 0.00691 0.033563
GO:0015833 peptide transport 2.4% (3/125) 2.96 0.00691 0.033563
GO:0008104 protein localization 2.4% (3/125) 2.91 0.007663 0.033773
GO:0033036 macromolecule localization 2.4% (3/125) 2.91 0.007663 0.033773
GO:0045184 establishment of protein localization 2.4% (3/125) 2.94 0.007206 0.034299
GO:0016531 copper chaperone activity 0.8% (1/125) 7.4 0.005917 0.034348
GO:0031970 organelle envelope lumen 0.8% (1/125) 7.4 0.005917 0.034348
GO:0016530 metallochaperone activity 0.8% (1/125) 7.4 0.005917 0.034348
GO:0005758 mitochondrial intermembrane space 0.8% (1/125) 7.4 0.005917 0.034348
GO:0030515 snoRNA binding 0.8% (1/125) 7.4 0.005917 0.034348
GO:0034062 5'-3' RNA polymerase activity 1.6% (2/125) 3.94 0.007595 0.03476
GO:0097747 RNA polymerase activity 1.6% (2/125) 3.94 0.007595 0.03476
GO:0032774 RNA biosynthetic process 2.4% (3/125) 2.98 0.006622 0.035022
GO:0090304 nucleic acid metabolic process 4.8% (6/125) 1.85 0.006788 0.03512
GO:0044237 cellular metabolic process 15.2% (19/125) 0.85 0.008384 0.036282
GO:1901362 organic cyclic compound biosynthetic process 3.2% (4/125) 2.3 0.009134 0.036846
GO:0046483 heterocycle metabolic process 5.6% (7/125) 1.59 0.009008 0.036965
GO:0008250 oligosaccharyltransferase complex 0.8% (1/125) 6.81 0.008862 0.037005
GO:0009143 nucleoside triphosphate catabolic process 0.8% (1/125) 6.81 0.008862 0.037005
GO:0006725 cellular aromatic compound metabolic process 5.6% (7/125) 1.57 0.009552 0.03789
GO:0051641 cellular localization 2.4% (3/125) 3.05 0.005801 0.03835
GO:0006139 nucleobase-containing compound metabolic process 5.6% (7/125) 1.72 0.005732 0.038977
GO:0018130 heterocycle biosynthetic process 3.2% (4/125) 2.5 0.005702 0.039915
GO:1901360 organic cyclic compound metabolic process 5.6% (7/125) 1.54 0.010779 0.042054
GO:0000439 transcription factor TFIIH core complex 0.8% (1/125) 6.4 0.011799 0.043879
GO:0003713 transcription coactivator activity 0.8% (1/125) 6.4 0.011799 0.043879
GO:1901292 nucleoside phosphate catabolic process 0.8% (1/125) 6.4 0.011799 0.043879
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_178 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_256 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_12 0.106 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_128 0.071 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_149 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_196 0.033 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_48 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_204 0.044 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_9 0.045 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_10 0.053 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_31 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_71 0.035 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_77 0.041 Archaeplastida Compare
Oryza sativa HCCA Cluster_72 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_269 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_325 0.043 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_64 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_94 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_128 0.044 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_190 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_198 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_215 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_286 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_155 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_374 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_490 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_16 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_17 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_40 0.091 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_209 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_98 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_127 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_134 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_239 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_44 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_11 0.015 LandPlants Compare
Amborella trichopoda HCCA Cluster_178 0.019 LandPlants Compare
Amborella trichopoda HCCA Cluster_256 0.019 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_5 0.016 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_12 0.101 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_128 0.071 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_138 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_149 0.023 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_152 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_158 0.018 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_196 0.033 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_210 0.018 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_232 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_193 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_204 0.044 LandPlants Compare
Marchantia polymorpha HCCA Cluster_9 0.041 LandPlants Compare
Marchantia polymorpha HCCA Cluster_10 0.052 LandPlants Compare
Marchantia polymorpha HCCA Cluster_31 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_71 0.035 LandPlants Compare
Marchantia polymorpha HCCA Cluster_77 0.036 LandPlants Compare
Oryza sativa HCCA Cluster_325 0.043 LandPlants Compare
Physcomitrella patens HCCA Cluster_10 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_42 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_64 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_94 0.025 LandPlants Compare
Physcomitrella patens HCCA Cluster_128 0.034 LandPlants Compare
Physcomitrella patens HCCA Cluster_190 0.022 LandPlants Compare
Physcomitrella patens HCCA Cluster_198 0.02 LandPlants Compare
Physcomitrella patens HCCA Cluster_215 0.025 LandPlants Compare
Physcomitrella patens HCCA Cluster_248 0.026 LandPlants Compare
Physcomitrella patens HCCA Cluster_286 0.03 LandPlants Compare
Picea abies HCCA Cluster_120 0.018 LandPlants Compare
Picea abies HCCA Cluster_155 0.019 LandPlants Compare
Picea abies HCCA Cluster_362 0.015 LandPlants Compare
Picea abies HCCA Cluster_374 0.023 LandPlants Compare
Picea abies HCCA Cluster_490 0.017 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_16 0.025 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_17 0.025 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_40 0.018 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_98 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_40 0.09 LandPlants Compare
Solanum lycopersicum HCCA Cluster_284 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_44 0.025 LandPlants Compare
Vitis vinifera HCCA Cluster_79 0.018 LandPlants Compare
Vitis vinifera HCCA Cluster_98 0.021 LandPlants Compare
Vitis vinifera HCCA Cluster_127 0.026 LandPlants Compare
Vitis vinifera HCCA Cluster_239 0.017 LandPlants Compare
Zea mays HCCA Cluster_44 0.023 LandPlants Compare
Zea mays HCCA Cluster_63 0.017 LandPlants Compare
Zea mays HCCA Cluster_67 0.017 LandPlants Compare
Zea mays HCCA Cluster_199 0.03 LandPlants Compare
Zea mays HCCA Cluster_338 0.015 LandPlants Compare
Amborella trichopoda HCCA Cluster_178 0.019 SeedPlants Compare
Amborella trichopoda HCCA Cluster_237 0.013 SeedPlants Compare
Amborella trichopoda HCCA Cluster_256 0.019 SeedPlants Compare
Amborella trichopoda HCCA Cluster_257 0.012 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_12 0.101 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_128 0.064 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_138 0.015 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_149 0.017 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_158 0.018 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_179 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_196 0.033 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_210 0.018 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_232 0.016 SeedPlants Compare
Gingko biloba HCCA Cluster_193 0.016 SeedPlants Compare
Gingko biloba HCCA Cluster_204 0.044 SeedPlants Compare
Gingko biloba HCCA Cluster_222 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_317 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_325 0.043 SeedPlants Compare
Picea abies HCCA Cluster_83 0.014 SeedPlants Compare
Picea abies HCCA Cluster_120 0.014 SeedPlants Compare
Picea abies HCCA Cluster_125 0.012 SeedPlants Compare
Picea abies HCCA Cluster_155 0.019 SeedPlants Compare
Picea abies HCCA Cluster_281 0.013 SeedPlants Compare
Picea abies HCCA Cluster_362 0.015 SeedPlants Compare
Picea abies HCCA Cluster_374 0.023 SeedPlants Compare
Picea abies HCCA Cluster_415 0.012 SeedPlants Compare
Picea abies HCCA Cluster_490 0.017 SeedPlants Compare
Picea abies HCCA Cluster_492 0.012 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_40 0.09 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_284 0.016 SeedPlants Compare
Vitis vinifera HCCA Cluster_1 0.012 SeedPlants Compare
Vitis vinifera HCCA Cluster_7 0.015 SeedPlants Compare
Vitis vinifera HCCA Cluster_18 0.014 SeedPlants Compare
Vitis vinifera HCCA Cluster_44 0.024 SeedPlants Compare
Vitis vinifera HCCA Cluster_79 0.012 SeedPlants Compare
Vitis vinifera HCCA Cluster_98 0.015 SeedPlants Compare
Vitis vinifera HCCA Cluster_127 0.02 SeedPlants Compare
Vitis vinifera HCCA Cluster_134 0.013 SeedPlants Compare
Vitis vinifera HCCA Cluster_161 0.014 SeedPlants Compare
Vitis vinifera HCCA Cluster_239 0.017 SeedPlants Compare
Zea mays HCCA Cluster_44 0.023 SeedPlants Compare
Zea mays HCCA Cluster_63 0.017 SeedPlants Compare
Zea mays HCCA Cluster_67 0.017 SeedPlants Compare
Zea mays HCCA Cluster_199 0.029 SeedPlants Compare
Zea mays HCCA Cluster_267 0.013 SeedPlants Compare
Zea mays HCCA Cluster_327 0.012 SeedPlants Compare
Zea mays HCCA Cluster_338 0.015 SeedPlants Compare
Sequences (125) (download table)

InterPro Domains

GO Terms

Family Terms