Coexpression cluster: Cluster_367 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity 3.12% (2/64) 8.8 8e-06 0.000199
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 3.12% (2/64) 8.8 8e-06 0.000199
GO:0050993 dimethylallyl diphosphate metabolic process 3.12% (2/64) 8.8 8e-06 0.000199
GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity 3.12% (2/64) 8.8 8e-06 0.000199
GO:0050992 dimethylallyl diphosphate biosynthetic process 3.12% (2/64) 8.8 8e-06 0.000199
GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor 3.12% (2/64) 8.8 8e-06 0.000199
GO:0046490 isopentenyl diphosphate metabolic process 3.12% (2/64) 8.8 8e-06 0.000199
GO:0009240 isopentenyl diphosphate biosynthetic process 3.12% (2/64) 8.8 8e-06 0.000199
GO:0006771 riboflavin metabolic process 3.12% (2/64) 7.31 7.2e-05 0.000959
GO:0009231 riboflavin biosynthetic process 3.12% (2/64) 7.31 7.2e-05 0.000959
GO:0042726 flavin-containing compound metabolic process 3.12% (2/64) 7.31 7.2e-05 0.000959
GO:0017038 protein import 3.12% (2/64) 7.31 7.2e-05 0.000959
GO:0042727 flavin-containing compound biosynthetic process 3.12% (2/64) 7.31 7.2e-05 0.000959
GO:0016725 oxidoreductase activity, acting on CH or CH2 groups 3.12% (2/64) 7.66 4.4e-05 0.000968
GO:0006081 cellular aldehyde metabolic process 3.12% (2/64) 7.21 8.3e-05 0.001037
GO:0019682 glyceraldehyde-3-phosphate metabolic process 3.12% (2/64) 7.53 5.2e-05 0.001045
GO:0009110 vitamin biosynthetic process 3.12% (2/64) 6.36 0.000275 0.002624
GO:0006767 water-soluble vitamin metabolic process 3.12% (2/64) 6.36 0.000275 0.002624
GO:0006766 vitamin metabolic process 3.12% (2/64) 6.36 0.000275 0.002624
GO:0042364 water-soluble vitamin biosynthetic process 3.12% (2/64) 6.36 0.000275 0.002624
GO:0009058 biosynthetic process 10.94% (7/64) 2.48 0.00026 0.003053
GO:0044281 small molecule metabolic process 7.81% (5/64) 2.96 0.000463 0.004029
GO:0018130 heterocycle biosynthetic process 6.25% (4/64) 3.5 0.000444 0.004036
GO:0008654 phospholipid biosynthetic process 3.12% (2/64) 5.76 0.000638 0.00532
GO:0090407 organophosphate biosynthetic process 4.69% (3/64) 4.11 0.000725 0.005574
GO:0044249 cellular biosynthetic process 9.38% (6/64) 2.49 0.000706 0.005649
GO:1901362 organic cyclic compound biosynthetic process 6.25% (4/64) 3.24 0.000873 0.006466
GO:1901576 organic substance biosynthetic process 9.38% (6/64) 2.4 0.00096 0.006859
GO:0071705 nitrogen compound transport 4.69% (3/64) 3.95 0.001003 0.006914
GO:0006090 pyruvate metabolic process 3.12% (2/64) 5.26 0.001274 0.008495
GO:0071702 organic substance transport 4.69% (3/64) 3.75 0.001489 0.009609
GO:0006644 phospholipid metabolic process 3.12% (2/64) 5.1 0.001597 0.009981
GO:0019637 organophosphate metabolic process 4.69% (3/64) 3.62 0.001917 0.011619
GO:0003333 amino acid transmembrane transport 1.56% (1/64) 8.53 0.002696 0.015858
GO:0098656 anion transmembrane transport 1.56% (1/64) 8.12 0.003593 0.019421
GO:1905039 carboxylic acid transmembrane transport 1.56% (1/64) 8.12 0.003593 0.019421
GO:1903825 organic acid transmembrane transport 1.56% (1/64) 8.12 0.003593 0.019421
GO:0044271 cellular nitrogen compound biosynthetic process 6.25% (4/64) 2.65 0.003832 0.020168
GO:0006865 amino acid transport 1.56% (1/64) 7.53 0.005385 0.027613
GO:0006741 NADP biosynthetic process 1.56% (1/64) 7.31 0.006279 0.03063
GO:0003951 NAD+ kinase activity 1.56% (1/64) 7.31 0.006279 0.03063
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 3.12% (2/64) 3.92 0.007858 0.037417
GO:0019898 extrinsic component of membrane 1.56% (1/64) 6.95 0.008066 0.037517
GO:0008104 protein localization 3.12% (2/64) 3.75 0.009805 0.038451
GO:0033036 macromolecule localization 3.12% (2/64) 3.75 0.009805 0.038451
GO:0032787 monocarboxylic acid metabolic process 3.12% (2/64) 3.84 0.008699 0.039542
GO:0045184 establishment of protein localization 3.12% (2/64) 3.76 0.009692 0.039559
GO:0042886 amide transport 3.12% (2/64) 3.76 0.009692 0.039559
GO:0015833 peptide transport 3.12% (2/64) 3.76 0.009692 0.039559
GO:0015031 protein transport 3.12% (2/64) 3.76 0.009692 0.039559
GO:0006739 NADP metabolic process 1.56% (1/64) 6.8 0.008958 0.039815
GO:0009654 photosystem II oxygen evolving complex 1.56% (1/64) 6.53 0.010741 0.041309
GO:0046483 heterocycle metabolic process 6.25% (4/64) 2.17 0.012197 0.046025
GO:0009523 photosystem II 1.56% (1/64) 6.21 0.013408 0.049659
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_3 0.041 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_71 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_73 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_87 0.039 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_151 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_192 0.035 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_214 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_238 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_265 0.032 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_54 0.019 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_76 0.018 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_96 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_142 0.026 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_144 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_21 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_80 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_126 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_147 0.04 Gene family Compare
Oryza sativa HCCA cluster Cluster_223 0.03 Gene family Compare
Oryza sativa HCCA cluster Cluster_226 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_263 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_403 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_11 0.022 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_34 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_43 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_77 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_94 0.021 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_144 0.029 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_167 0.028 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_185 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_203 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_17 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_48 0.028 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_92 0.026 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_103 0.032 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_145 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_206 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_214 0.039 Gene family Compare
Vitis vinifera HCCA cluster Cluster_2 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_76 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_120 0.03 Gene family Compare
Vitis vinifera HCCA cluster Cluster_124 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_212 0.03 Gene family Compare
Vitis vinifera HCCA cluster Cluster_218 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_345 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_11 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_52 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_53 0.032 Gene family Compare
Zea mays HCCA cluster Cluster_69 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_143 0.031 Gene family Compare
Zea mays HCCA cluster Cluster_165 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_227 0.027 Gene family Compare
Zea mays HCCA cluster Cluster_233 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_246 0.042 Gene family Compare
Zea mays HCCA cluster Cluster_355 0.016 Gene family Compare
Sequences (64) (download table)

InterPro Domains

GO Terms

Family Terms