Coexpression cluster: Cluster_127 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0010228 vegetative to reproductive phase transition of meristem 18.81% (19/101) 4.11 0.0 0.0
GO:0010090 trichome morphogenesis 13.86% (14/101) 4.88 0.0 0.0
GO:0007155 cell adhesion 11.88% (12/101) 5.18 0.0 0.0
GO:0022610 biological adhesion 11.88% (12/101) 5.18 0.0 0.0
GO:1902905 positive regulation of supramolecular fiber organization 11.88% (12/101) 4.94 0.0 0.0
GO:0051495 positive regulation of cytoskeleton organization 11.88% (12/101) 4.94 0.0 0.0
GO:0044089 positive regulation of cellular component biogenesis 11.88% (12/101) 4.94 0.0 0.0
GO:0030832 regulation of actin filament length 11.88% (12/101) 4.89 0.0 0.0
GO:0110053 regulation of actin filament organization 11.88% (12/101) 4.89 0.0 0.0
GO:0032970 regulation of actin filament-based process 11.88% (12/101) 4.89 0.0 0.0
GO:0008064 regulation of actin polymerization or depolymerization 11.88% (12/101) 4.89 0.0 0.0
GO:0032956 regulation of actin cytoskeleton organization 11.88% (12/101) 4.89 0.0 0.0
GO:0003006 developmental process involved in reproduction 32.67% (33/101) 2.26 0.0 0.0
GO:0032271 regulation of protein polymerization 11.88% (12/101) 4.86 0.0 0.0
GO:0043254 regulation of protein complex assembly 11.88% (12/101) 4.85 0.0 0.0
GO:0045010 actin nucleation 11.88% (12/101) 5.01 0.0 0.0
GO:0031334 positive regulation of protein complex assembly 11.88% (12/101) 4.95 0.0 0.0
GO:0032273 positive regulation of protein polymerization 11.88% (12/101) 4.97 0.0 0.0
GO:0030838 positive regulation of actin filament polymerization 11.88% (12/101) 4.98 0.0 0.0
GO:0030833 regulation of actin filament polymerization 11.88% (12/101) 4.9 0.0 0.0
GO:0010638 positive regulation of organelle organization 12.87% (13/101) 4.54 0.0 0.0
GO:1902903 regulation of supramolecular fiber organization 11.88% (12/101) 4.82 0.0 0.0
GO:0051130 positive regulation of cellular component organization 12.87% (13/101) 4.53 0.0 0.0
GO:0051493 regulation of cytoskeleton organization 11.88% (12/101) 4.8 0.0 0.0
GO:0022414 reproductive process 34.65% (35/101) 2.09 0.0 0.0
GO:0044087 regulation of cellular component biogenesis 11.88% (12/101) 4.66 0.0 0.0
GO:0070647 protein modification by small protein conjugation or removal 14.85% (15/101) 3.78 0.0 0.0
GO:0007015 actin filament organization 11.88% (12/101) 4.4 0.0 0.0
GO:0033043 regulation of organelle organization 13.86% (14/101) 3.91 0.0 0.0
GO:0032535 regulation of cellular component size 11.88% (12/101) 4.28 0.0 0.0
GO:0090066 regulation of anatomical structure size 11.88% (12/101) 4.28 0.0 0.0
GO:0097435 supramolecular fiber organization 11.88% (12/101) 4.2 0.0 0.0
GO:0071695 anatomical structure maturation 11.88% (12/101) 4.16 0.0 0.0
GO:0051128 regulation of cellular component organization 14.85% (15/101) 3.5 0.0 0.0
GO:0016043 cellular component organization 35.64% (36/101) 1.81 0.0 0.0
GO:0021700 developmental maturation 11.88% (12/101) 4.07 0.0 0.0
GO:0005634 nucleus 66.34% (67/101) 0.97 0.0 0.0
GO:0032502 developmental process 38.61% (39/101) 1.61 0.0 0.0
GO:0000904 cell morphogenesis involved in differentiation 14.85% (15/101) 3.28 0.0 0.0
GO:0071840 cellular component organization or biogenesis 35.64% (36/101) 1.7 0.0 0.0
GO:0048764 trichoblast maturation 9.9% (10/101) 4.24 0.0 0.0
GO:0048765 root hair cell differentiation 9.9% (10/101) 4.24 0.0 0.0
GO:0048469 cell maturation 9.9% (10/101) 4.23 0.0 0.0
GO:0022402 cell cycle process 15.84% (16/101) 3.0 0.0 0.0
GO:0048856 anatomical structure development 26.73% (27/101) 2.02 0.0 0.0
GO:0051239 regulation of multicellular organismal process 15.84% (16/101) 2.93 0.0 0.0
GO:0018205 peptidyl-lysine modification 12.87% (13/101) 3.37 0.0 0.0
GO:0050793 regulation of developmental process 18.81% (19/101) 2.56 0.0 0.0
GO:0050665 hydrogen peroxide biosynthetic process 7.92% (8/101) 4.82 0.0 0.0
GO:0016926 protein desumoylation 7.92% (8/101) 4.78 0.0 0.0
GO:1903409 reactive oxygen species biosynthetic process 7.92% (8/101) 4.73 0.0 0.0
GO:0000902 cell morphogenesis 15.84% (16/101) 2.83 0.0 0.0
GO:0032989 cellular component morphogenesis 15.84% (16/101) 2.83 0.0 0.0
GO:0006464 cellular protein modification process 24.75% (25/101) 2.02 0.0 0.0
GO:0036211 protein modification process 24.75% (25/101) 2.02 0.0 0.0
GO:0010053 root epidermal cell differentiation 9.9% (10/101) 3.87 0.0 0.0
GO:0090627 plant epidermal cell differentiation 9.9% (10/101) 3.8 0.0 0.0
GO:0018193 peptidyl-amino acid modification 12.87% (13/101) 3.14 0.0 0.0
GO:2000026 regulation of multicellular organismal development 13.86% (14/101) 2.8 0.0 0.0
GO:0045595 regulation of cell differentiation 6.93% (7/101) 4.62 0.0 0.0
GO:0043412 macromolecule modification 25.74% (26/101) 1.79 0.0 0.0
GO:0050789 regulation of biological process 40.59% (41/101) 1.25 0.0 0.0
GO:0070646 protein modification by small protein removal 7.92% (8/101) 4.02 0.0 1e-06
GO:0032501 multicellular organismal process 23.76% (24/101) 1.83 0.0 1e-06
GO:0042800 histone methyltransferase activity (H3-K4 specific) 2.97% (3/101) 8.08 0.0 1e-06
GO:0009793 embryo development ending in seed dormancy 12.87% (13/101) 2.74 0.0 1e-06
GO:0009790 embryo development 12.87% (13/101) 2.74 0.0 1e-06
GO:0006325 chromatin organization 12.87% (13/101) 2.74 0.0 1e-06
GO:0042743 hydrogen peroxide metabolic process 7.92% (8/101) 3.86 0.0 1e-06
GO:0044267 cellular protein metabolic process 24.75% (25/101) 1.71 0.0 1e-06
GO:0009506 plasmodesma 15.84% (16/101) 2.35 0.0 1e-06
GO:0005911 cell-cell junction 15.84% (16/101) 2.34 0.0 1e-06
GO:0030054 cell junction 15.84% (16/101) 2.34 0.0 1e-06
GO:0007275 multicellular organism development 15.84% (16/101) 2.31 0.0 2e-06
GO:1903047 mitotic cell cycle process 8.91% (9/101) 3.46 0.0 2e-06
GO:0019538 protein metabolic process 28.71% (29/101) 1.51 0.0 2e-06
GO:0065007 biological regulation 42.57% (43/101) 1.1 0.0 2e-06
GO:0006996 organelle organization 18.81% (19/101) 2.01 0.0 3e-06
GO:0072593 reactive oxygen species metabolic process 7.92% (8/101) 3.64 0.0 3e-06
GO:0048869 cellular developmental process 17.82% (18/101) 2.04 0.0 4e-06
GO:0071555 cell wall organization 11.88% (12/101) 2.7 0.0 4e-06
GO:0044260 cellular macromolecule metabolic process 32.67% (33/101) 1.3 0.0 5e-06
GO:0000911 cytokinesis by cell plate formation 7.92% (8/101) 3.55 0.0 5e-06
GO:1990234 transferase complex 8.91% (9/101) 3.26 0.0 5e-06
GO:1902410 mitotic cytokinetic process 7.92% (8/101) 3.52 1e-06 6e-06
GO:0032506 cytokinetic process 7.92% (8/101) 3.52 1e-06 6e-06
GO:0048518 positive regulation of biological process 15.84% (16/101) 2.13 1e-06 8e-06
GO:0009653 anatomical structure morphogenesis 16.83% (17/101) 2.03 1e-06 8e-06
GO:0048522 positive regulation of cellular process 13.86% (14/101) 2.31 1e-06 9e-06
GO:0004386 helicase activity 6.93% (7/101) 3.77 1e-06 1e-05
GO:0045229 external encapsulating structure organization 11.88% (12/101) 2.56 1e-06 1e-05
GO:0033044 regulation of chromosome organization 6.93% (7/101) 3.73 1e-06 1.1e-05
GO:0009791 post-embryonic development 11.88% (12/101) 2.5 1e-06 1.5e-05
GO:0009630 gravitropism 6.93% (7/101) 3.64 2e-06 1.7e-05
GO:0048580 regulation of post-embryonic development 10.89% (11/101) 2.63 2e-06 1.8e-05
GO:0043170 macromolecule metabolic process 36.63% (37/101) 1.09 2e-06 2.3e-05
GO:0009629 response to gravity 6.93% (7/101) 3.57 2e-06 2.3e-05
GO:0009606 tropism 6.93% (7/101) 3.53 3e-06 2.6e-05
GO:0018024 histone-lysine N-methyltransferase activity 2.97% (3/101) 6.67 3e-06 2.7e-05
GO:0000226 microtubule cytoskeleton organization 7.92% (8/101) 3.19 3e-06 2.9e-05
GO:0071554 cell wall organization or biogenesis 11.88% (12/101) 2.36 4e-06 3.7e-05
GO:0006508 proteolysis 13.86% (14/101) 2.12 4e-06 3.7e-05
GO:0050794 regulation of cellular process 32.67% (33/101) 1.15 4e-06 4e-05
GO:0007017 microtubule-based process 7.92% (8/101) 3.08 5e-06 4.9e-05
GO:0009892 negative regulation of metabolic process 11.88% (12/101) 2.31 6e-06 5.2e-05
GO:0016279 protein-lysine N-methyltransferase activity 2.97% (3/101) 6.35 6e-06 5.3e-05
GO:0016278 lysine N-methyltransferase activity 2.97% (3/101) 6.35 6e-06 5.3e-05
GO:0016567 protein ubiquitination 6.93% (7/101) 3.31 7e-06 6.7e-05
GO:0007010 cytoskeleton organization 8.91% (9/101) 2.75 8e-06 7.4e-05
GO:0040029 regulation of gene expression, epigenetic 7.92% (8/101) 2.96 9e-06 8.2e-05
GO:0048608 reproductive structure development 6.93% (7/101) 3.24 1e-05 8.8e-05
GO:0006074 (1->3)-beta-D-glucan metabolic process 2.97% (3/101) 6.08 1e-05 9e-05
GO:0003843 1,3-beta-D-glucan synthase activity 2.97% (3/101) 6.08 1e-05 9e-05
GO:0006075 (1->3)-beta-D-glucan biosynthetic process 2.97% (3/101) 6.08 1e-05 9e-05
GO:0000148 1,3-beta-D-glucan synthase complex 2.97% (3/101) 6.08 1e-05 9e-05
GO:0017000 antibiotic biosynthetic process 7.92% (8/101) 2.93 1.1e-05 9.1e-05
GO:0032446 protein modification by small protein conjugation 6.93% (7/101) 3.17 1.4e-05 0.000111
GO:0031324 negative regulation of cellular metabolic process 9.9% (10/101) 2.47 1.4e-05 0.000112
GO:0017111 nucleoside-triphosphatase activity 10.89% (11/101) 2.32 1.3e-05 0.000112
GO:0090213 regulation of radial pattern formation 1.98% (2/101) 8.08 1.3e-05 0.000112
GO:0043044 ATP-dependent chromatin remodeling 1.98% (2/101) 8.08 1.3e-05 0.000112
GO:0010431 seed maturation 3.96% (4/101) 4.66 1.9e-05 0.000156
GO:0010605 negative regulation of macromolecule metabolic process 10.89% (11/101) 2.25 2e-05 0.000163
GO:0016462 pyrophosphatase activity 10.89% (11/101) 2.25 2e-05 0.000163
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 10.89% (11/101) 2.25 2.1e-05 0.000164
GO:0010072 primary shoot apical meristem specification 3.96% (4/101) 4.62 2.1e-05 0.000166
GO:1902494 catalytic complex 9.9% (10/101) 2.39 2.2e-05 0.00017
GO:0016817 hydrolase activity, acting on acid anhydrides 10.89% (11/101) 2.24 2.2e-05 0.00017
GO:0044424 intracellular part 89.11% (90/101) 0.31 2.3e-05 0.000178
GO:0051276 chromosome organization 6.93% (7/101) 3.04 2.4e-05 0.00018
GO:0030154 cell differentiation 9.9% (10/101) 2.37 2.5e-05 0.000188
GO:0009880 embryonic pattern specification 3.96% (4/101) 4.56 2.5e-05 0.000189
GO:0042054 histone methyltransferase activity 2.97% (3/101) 5.67 2.6e-05 0.000196
GO:2000241 regulation of reproductive process 8.91% (9/101) 2.52 2.8e-05 0.00021
GO:0048519 negative regulation of biological process 14.85% (15/101) 1.78 3e-05 0.000217
GO:0061733 peptide-lysine-N-acetyltransferase activity 2.97% (3/101) 5.58 3.2e-05 0.000229
GO:0004402 histone acetyltransferase activity 2.97% (3/101) 5.58 3.2e-05 0.000229
GO:0034212 peptide N-acetyltransferase activity 2.97% (3/101) 5.58 3.2e-05 0.000229
GO:0051301 cell division 4.95% (5/101) 3.78 3.4e-05 0.000239
GO:1903046 meiotic cell cycle process 6.93% (7/101) 2.96 3.5e-05 0.000244
GO:0090421 embryonic meristem initiation 3.96% (4/101) 4.44 3.5e-05 0.000247
GO:0010629 negative regulation of gene expression 9.9% (10/101) 2.29 3.9e-05 0.000273
GO:0009887 animal organ morphogenesis 4.95% (5/101) 3.72 4.1e-05 0.000277
GO:0010452 histone H3-K36 methylation 1.98% (2/101) 7.5 4e-05 0.000279
GO:0065008 regulation of biological quality 16.83% (17/101) 1.6 4.1e-05 0.000279
GO:0010014 meristem initiation 5.94% (6/101) 3.25 4.2e-05 0.000286
GO:0000151 ubiquitin ligase complex 5.94% (6/101) 3.2 5.1e-05 0.000344
GO:0009909 regulation of flower development 7.92% (8/101) 2.6 5.4e-05 0.000363
GO:0051172 negative regulation of nitrogen compound metabolic process 8.91% (9/101) 2.38 6.2e-05 0.000411
GO:0016999 antibiotic metabolic process 7.92% (8/101) 2.49 9.5e-05 0.000629
GO:0048523 negative regulation of cellular process 10.89% (11/101) 1.99 0.000103 0.000672
GO:0048831 regulation of shoot system development 7.92% (8/101) 2.47 0.000104 0.000678
GO:0006473 protein acetylation 2.97% (3/101) 5.02 0.000106 0.000678
GO:0008170 N-methyltransferase activity 2.97% (3/101) 5.02 0.000106 0.000678
GO:0006807 nitrogen compound metabolic process 35.64% (36/101) 0.87 0.000111 0.000706
GO:2000113 negative regulation of cellular macromolecule biosynthetic process 7.92% (8/101) 2.45 0.000116 0.000729
GO:0010558 negative regulation of macromolecule biosynthetic process 7.92% (8/101) 2.45 0.000116 0.000729
GO:0008276 protein methyltransferase activity 2.97% (3/101) 4.97 0.000119 0.000745
GO:0048646 anatomical structure formation involved in morphogenesis 6.93% (7/101) 2.65 0.000134 0.000834
GO:0031327 negative regulation of cellular biosynthetic process 7.92% (8/101) 2.41 0.000137 0.000847
GO:0009987 cellular process 53.47% (54/101) 0.6 0.000141 0.000868
GO:0009890 negative regulation of biosynthetic process 7.92% (8/101) 2.4 0.000147 0.000895
GO:0006338 chromatin remodeling 2.97% (3/101) 4.86 0.000149 0.000905
GO:0007049 cell cycle 5.94% (6/101) 2.91 0.000153 0.000921
GO:0007131 reciprocal meiotic recombination 4.95% (5/101) 3.31 0.000157 0.000941
GO:0035825 homologous recombination 4.95% (5/101) 3.3 0.000162 0.000968
GO:0007062 sister chromatid cohesion 4.95% (5/101) 3.25 0.000186 0.001099
GO:0048827 phyllome development 6.93% (7/101) 2.55 0.000199 0.001169
GO:0048609 multicellular organismal reproductive process 5.94% (6/101) 2.83 0.000205 0.001198
GO:0004842 ubiquitin-protein transferase activity 5.94% (6/101) 2.8 0.00023 0.001338
GO:0019787 ubiquitin-like protein transferase activity 5.94% (6/101) 2.78 0.000252 0.001458
GO:0043227 membrane-bounded organelle 78.22% (79/101) 0.35 0.000266 0.001531
GO:0048581 negative regulation of post-embryonic development 3.96% (4/101) 3.67 0.000281 0.001596
GO:0010199 organ boundary specification between lateral organs and the meristem 1.98% (2/101) 6.28 0.00028 0.001598
GO:0003682 chromatin binding 2.97% (3/101) 4.46 0.000345 0.001953
GO:0098797 plasma membrane protein complex 3.96% (4/101) 3.57 0.000364 0.002047
GO:1901564 organonitrogen compound metabolic process 28.71% (29/101) 0.92 0.000374 0.00209
GO:0048437 floral organ development 4.95% (5/101) 3.03 0.000382 0.002122
GO:0043229 intracellular organelle 78.22% (79/101) 0.33 0.000429 0.00236
GO:0060255 regulation of macromolecule metabolic process 19.8% (20/101) 1.18 0.000429 0.00237
GO:0006259 DNA metabolic process 9.9% (10/101) 1.86 0.000438 0.002381
GO:0043226 organelle 78.22% (79/101) 0.33 0.000436 0.002384
GO:0051241 negative regulation of multicellular organismal process 3.96% (4/101) 3.5 0.000447 0.002413
GO:0051568 histone H3-K4 methylation 1.98% (2/101) 5.91 0.000477 0.002563
GO:0009616 virus induced gene silencing 3.96% (4/101) 3.44 0.000521 0.002742
GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction 3.96% (4/101) 3.44 0.000521 0.002742
GO:0052018 modulation by symbiont of RNA levels in host 3.96% (4/101) 3.44 0.000521 0.002742
GO:0099402 plant organ development 8.91% (9/101) 1.96 0.000514 0.002747
GO:0098586 cellular response to virus 3.96% (4/101) 3.42 0.000541 0.002832
GO:0045892 negative regulation of transcription, DNA-templated 6.93% (7/101) 2.31 0.000553 0.002847
GO:1903507 negative regulation of nucleic acid-templated transcription 6.93% (7/101) 2.31 0.000553 0.002847
GO:1902679 negative regulation of RNA biosynthetic process 6.93% (7/101) 2.31 0.000553 0.002847
GO:0043231 intracellular membrane-bounded organelle 77.23% (78/101) 0.33 0.000557 0.002853
GO:0044238 primary metabolic process 38.61% (39/101) 0.71 0.00057 0.002907
GO:0043413 macromolecule glycosylation 4.95% (5/101) 2.89 0.000595 0.002974
GO:0006486 protein glycosylation 4.95% (5/101) 2.89 0.000595 0.002974
GO:0070085 glycosylation 4.95% (5/101) 2.89 0.000595 0.002974
GO:0051253 negative regulation of RNA metabolic process 6.93% (7/101) 2.29 0.000606 0.002996
GO:0090567 reproductive shoot system development 3.96% (4/101) 3.38 0.000604 0.003003
GO:0090691 formation of plant organ boundary 1.98% (2/101) 5.76 0.000595 0.003016
GO:0009910 negative regulation of flower development 2.97% (3/101) 4.18 0.000618 0.003039
GO:0051093 negative regulation of developmental process 3.96% (4/101) 3.37 0.000627 0.003067
GO:0016569 covalent chromatin modification 6.93% (7/101) 2.25 0.000693 0.003376
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 6.93% (7/101) 2.24 0.000724 0.003511
GO:0052543 callose deposition in cell wall 2.97% (3/101) 4.08 0.000747 0.003534
GO:0035821 modification of morphology or physiology of other organism 3.96% (4/101) 3.3 0.000746 0.003548
GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction 3.96% (4/101) 3.3 0.000746 0.003548
GO:0044003 modification by symbiont of host morphology or physiology 3.96% (4/101) 3.3 0.000746 0.003548
GO:0051188 cofactor biosynthetic process 7.92% (8/101) 2.05 0.000736 0.00355
GO:1905393 plant organ formation 4.95% (5/101) 2.8 0.000775 0.003631
GO:0010267 production of ta-siRNAs involved in RNA interference 3.96% (4/101) 3.29 0.000772 0.003635
GO:0008080 N-acetyltransferase activity 2.97% (3/101) 4.05 0.000793 0.003684
GO:0052386 cell wall thickening 2.97% (3/101) 4.05 0.000793 0.003684
GO:0044464 cell part 91.09% (92/101) 0.21 0.000847 0.003916
GO:0019222 regulation of metabolic process 20.79% (21/101) 1.06 0.000886 0.004074
GO:0016458 gene silencing 5.94% (6/101) 2.42 0.000934 0.004278
GO:0051701 interaction with host 3.96% (4/101) 3.19 0.001001 0.004519
GO:2000242 negative regulation of reproductive process 2.97% (3/101) 3.94 0.000998 0.004528
GO:0009556 microsporogenesis 2.97% (3/101) 3.94 0.000998 0.004528
GO:0000166 nucleotide binding 9.9% (10/101) 1.69 0.001116 0.004973
GO:1901265 nucleoside phosphate binding 9.9% (10/101) 1.69 0.001116 0.004973
GO:0016410 N-acyltransferase activity 2.97% (3/101) 3.89 0.001112 0.004998
GO:0010468 regulation of gene expression 17.82% (18/101) 1.14 0.001128 0.005001
GO:0032991 protein-containing complex 13.86% (14/101) 1.34 0.001172 0.005175
GO:0048859 formation of anatomical boundary 1.98% (2/101) 5.28 0.001191 0.005235
GO:0048236 plant-type sporogenesis 2.97% (3/101) 3.83 0.001233 0.005327
GO:0034293 sexual sporulation 2.97% (3/101) 3.83 0.001233 0.005327
GO:0043934 sporulation 2.97% (3/101) 3.83 0.001233 0.005327
GO:0051321 meiotic cell cycle 2.97% (3/101) 3.83 0.001233 0.005327
GO:0035196 production of miRNAs involved in gene silencing by miRNA 3.96% (4/101) 3.08 0.001311 0.005636
GO:0010346 shoot axis formation 1.98% (2/101) 5.18 0.001371 0.005844
GO:0010223 secondary shoot formation 1.98% (2/101) 5.18 0.001371 0.005844
GO:0044419 interspecies interaction between organisms 3.96% (4/101) 3.06 0.001388 0.005891
GO:0007389 pattern specification process 5.94% (6/101) 2.26 0.001629 0.006885
GO:0001763 morphogenesis of a branching structure 1.98% (2/101) 5.0 0.001767 0.007437
GO:0010050 vegetative phase change 2.97% (3/101) 3.65 0.001802 0.007553
GO:0006342 chromatin silencing 4.95% (5/101) 2.53 0.001811 0.007558
GO:0030422 production of siRNA involved in RNA interference 3.96% (4/101) 2.95 0.001821 0.007568
GO:0016407 acetyltransferase activity 2.97% (3/101) 3.62 0.001883 0.00776
GO:0006310 DNA recombination 4.95% (5/101) 2.52 0.001879 0.007777
GO:0045814 negative regulation of gene expression, epigenetic 4.95% (5/101) 2.51 0.001914 0.007855
GO:0070918 production of small RNA involved in gene silencing by RNA 3.96% (4/101) 2.92 0.001968 0.008008
GO:0031050 dsRNA fragmentation 3.96% (4/101) 2.92 0.001968 0.008008
GO:0009888 tissue development 4.95% (5/101) 2.48 0.002095 0.008493
GO:0051240 positive regulation of multicellular organismal process 2.97% (3/101) 3.56 0.002139 0.008635
GO:0051607 defense response to virus 3.96% (4/101) 2.86 0.002284 0.009184
GO:0051094 positive regulation of developmental process 2.97% (3/101) 3.48 0.002512 0.01006
GO:0009605 response to external stimulus 15.84% (16/101) 1.12 0.002527 0.010078
GO:0080090 regulation of primary metabolic process 17.82% (18/101) 1.02 0.003011 0.011957
GO:0048440 carpel development 2.97% (3/101) 3.36 0.003144 0.012437
GO:0048367 shoot system development 3.96% (4/101) 2.73 0.003157 0.01244
GO:0033233 regulation of protein sumoylation 0.99% (1/101) 8.08 0.003689 0.013714
GO:0015916 fatty-acyl-CoA transport 0.99% (1/101) 8.08 0.003689 0.013714
GO:1903321 negative regulation of protein modification by small protein conjugation or removal 0.99% (1/101) 8.08 0.003689 0.013714
GO:0090070 positive regulation of ribosome biogenesis 0.99% (1/101) 8.08 0.003689 0.013714
GO:0046861 glyoxysomal membrane 0.99% (1/101) 8.08 0.003689 0.013714
GO:2000234 positive regulation of rRNA processing 0.99% (1/101) 8.08 0.003689 0.013714
GO:0045974 regulation of translation, ncRNA-mediated 0.99% (1/101) 8.08 0.003689 0.013714
GO:0040033 negative regulation of translation, ncRNA-mediated 0.99% (1/101) 8.08 0.003689 0.013714
GO:0033234 negative regulation of protein sumoylation 0.99% (1/101) 8.08 0.003689 0.013714
GO:0035278 miRNA mediated inhibition of translation 0.99% (1/101) 8.08 0.003689 0.013714
GO:0006353 DNA-templated transcription, termination 0.99% (1/101) 8.08 0.003689 0.013714
GO:1901337 thioester transport 0.99% (1/101) 8.08 0.003689 0.013714
GO:0034508 centromere complex assembly 0.99% (1/101) 8.08 0.003689 0.013714
GO:0048283 indeterminate inflorescence morphogenesis 0.99% (1/101) 8.08 0.003689 0.013714
GO:0043621 protein self-association 1.98% (2/101) 4.5 0.003526 0.013839
GO:0070192 chromosome organization involved in meiotic cell cycle 2.97% (3/101) 3.28 0.003738 0.013846
GO:0051171 regulation of nitrogen compound metabolic process 16.83% (17/101) 1.02 0.003782 0.013956
GO:0010091 trichome branching 1.98% (2/101) 4.44 0.003824 0.014058
GO:0048731 system development 3.96% (4/101) 2.65 0.003904 0.014301
GO:0035251 UDP-glucosyltransferase activity 2.97% (3/101) 3.24 0.003994 0.014575
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 2.97% (3/101) 3.22 0.004125 0.015
GO:0009615 response to virus 3.96% (4/101) 2.61 0.004319 0.015647
GO:0009908 flower development 2.97% (3/101) 3.18 0.004536 0.016313
GO:0051274 beta-glucan biosynthetic process 2.97% (3/101) 3.18 0.004536 0.016313
GO:0042138 meiotic DNA double-strand break formation 2.97% (3/101) 3.14 0.004823 0.017283
GO:0003712 transcription coregulator activity 1.98% (2/101) 4.22 0.005125 0.0183
GO:0009933 meristem structural organization 2.97% (3/101) 3.1 0.005274 0.018763
GO:0050826 response to freezing 2.97% (3/101) 3.08 0.00543 0.01911
GO:0052545 callose localization 2.97% (3/101) 3.08 0.00543 0.01911
GO:0033037 polysaccharide localization 2.97% (3/101) 3.08 0.00543 0.01911
GO:0009628 response to abiotic stimulus 18.81% (19/101) 0.9 0.005576 0.019556
GO:0030029 actin filament-based process 2.97% (3/101) 3.05 0.005749 0.020092
GO:0009894 regulation of catabolic process 1.98% (2/101) 4.13 0.005842 0.020345
GO:0005524 ATP binding 5.94% (6/101) 1.88 0.005914 0.020523
GO:0009314 response to radiation 10.89% (11/101) 1.27 0.006022 0.020826
GO:0048532 anatomical structure arrangement 2.97% (3/101) 3.01 0.00625 0.021537
GO:0019915 lipid storage 2.97% (3/101) 3.0 0.006422 0.022054
GO:0071704 organic substance metabolic process 38.61% (39/101) 0.52 0.006467 0.022132
GO:0090304 nucleic acid metabolic process 14.85% (15/101) 1.02 0.006511 0.022206
GO:0061982 meiosis I cell cycle process 2.97% (3/101) 2.98 0.006597 0.022422
GO:0032559 adenyl ribonucleotide binding 5.94% (6/101) 1.84 0.006714 0.022663
GO:0030554 adenyl nucleotide binding 5.94% (6/101) 1.84 0.006714 0.022663
GO:0043967 histone H4 acetylation 0.99% (1/101) 7.08 0.007364 0.0238
GO:0055047 generative cell mitosis 0.99% (1/101) 7.08 0.007364 0.0238
GO:0090069 regulation of ribosome biogenesis 0.99% (1/101) 7.08 0.007364 0.0238
GO:0035004 phosphatidylinositol 3-kinase activity 0.99% (1/101) 7.08 0.007364 0.0238
GO:0140014 mitotic nuclear division 0.99% (1/101) 7.08 0.007364 0.0238
GO:0040019 positive regulation of embryonic development 0.99% (1/101) 7.08 0.007364 0.0238
GO:0006723 cuticle hydrocarbon biosynthetic process 0.99% (1/101) 7.08 0.007364 0.0238
GO:2000232 regulation of rRNA processing 0.99% (1/101) 7.08 0.007364 0.0238
GO:1903320 regulation of protein modification by small protein conjugation or removal 0.99% (1/101) 7.08 0.007364 0.0238
GO:0048017 inositol lipid-mediated signaling 0.99% (1/101) 7.08 0.007364 0.0238
GO:0016303 1-phosphatidylinositol-3-kinase activity 0.99% (1/101) 7.08 0.007364 0.0238
GO:0006344 maintenance of chromatin silencing 0.99% (1/101) 7.08 0.007364 0.0238
GO:0048015 phosphatidylinositol-mediated signaling 0.99% (1/101) 7.08 0.007364 0.0238
GO:0140096 catalytic activity, acting on a protein 11.88% (12/101) 1.15 0.007573 0.024317
GO:0009640 photomorphogenesis 3.96% (4/101) 2.38 0.007568 0.02438
GO:0045132 meiotic chromosome segregation 2.97% (3/101) 2.9 0.007708 0.024671
GO:0050896 response to stimulus 31.68% (32/101) 0.59 0.007773 0.024797
GO:0036094 small molecule binding 9.9% (10/101) 1.29 0.007847 0.024955
GO:0098813 nuclear chromosome segregation 2.97% (3/101) 2.89 0.007903 0.024973
GO:0031323 regulation of cellular metabolic process 16.83% (17/101) 0.92 0.007884 0.02499
GO:0006952 defense response 10.89% (11/101) 1.21 0.008008 0.025222
GO:0010182 sugar mediated signaling pathway 2.97% (3/101) 2.83 0.008713 0.02727
GO:0009756 carbohydrate mediated signaling 2.97% (3/101) 2.83 0.008713 0.02727
GO:0051235 maintenance of location 2.97% (3/101) 2.82 0.008923 0.027839
GO:0016570 histone modification 4.95% (5/101) 1.95 0.009672 0.030081
GO:0040034 regulation of development, heterochronic 1.98% (2/101) 3.73 0.010059 0.031186
GO:0017144 drug metabolic process 7.92% (8/101) 1.42 0.01011 0.031245
GO:0080008 Cul4-RING E3 ubiquitin ligase complex 2.97% (3/101) 2.75 0.010244 0.031561
GO:0044459 plasma membrane part 3.96% (4/101) 2.24 0.010498 0.032045
GO:0034968 histone lysine methylation 3.96% (4/101) 2.24 0.010498 0.032045
GO:0044237 cellular metabolic process 36.63% (37/101) 0.5 0.010568 0.032158
GO:0090305 nucleic acid phosphodiester bond hydrolysis 2.97% (3/101) 2.74 0.010474 0.032172
GO:0090436 leaf pavement cell development 0.99% (1/101) 6.5 0.011025 0.03226
GO:0017137 Rab GTPase binding 0.99% (1/101) 6.5 0.011025 0.03226
GO:0010599 production of lsiRNA involved in RNA interference 0.99% (1/101) 6.5 0.011025 0.03226
GO:0030981 cortical microtubule cytoskeleton 0.99% (1/101) 6.5 0.011025 0.03226
GO:0030742 GTP-dependent protein binding 0.99% (1/101) 6.5 0.011025 0.03226
GO:0007032 endosome organization 0.99% (1/101) 6.5 0.011025 0.03226
GO:0009303 rRNA transcription 0.99% (1/101) 6.5 0.011025 0.03226
GO:0010507 negative regulation of autophagy 0.99% (1/101) 6.5 0.011025 0.03226
GO:0009660 amyloplast organization 0.99% (1/101) 6.5 0.011025 0.03226
GO:0040014 regulation of multicellular organism growth 0.99% (1/101) 6.5 0.011025 0.03226
GO:0018022 peptidyl-lysine methylation 3.96% (4/101) 2.23 0.010654 0.03232
GO:0009416 response to light stimulus 9.9% (10/101) 1.22 0.010865 0.032862
GO:0044265 cellular macromolecule catabolic process 5.94% (6/101) 1.69 0.011009 0.033196
GO:0060151 peroxisome localization 1.98% (2/101) 3.62 0.011522 0.033417
GO:0051645 Golgi localization 1.98% (2/101) 3.62 0.011522 0.033417
GO:0051646 mitochondrion localization 1.98% (2/101) 3.62 0.011522 0.033417
GO:0043414 macromolecule methylation 5.94% (6/101) 1.67 0.011827 0.034102
GO:0032259 methylation 5.94% (6/101) 1.67 0.011827 0.034102
GO:0007059 chromosome segregation 2.97% (3/101) 2.66 0.012173 0.034997
GO:0051273 beta-glucan metabolic process 2.97% (3/101) 2.58 0.014021 0.040076
GO:0008168 methyltransferase activity 2.97% (3/101) 2.58 0.014021 0.040076
GO:0051177 meiotic sister chromatid cohesion 0.99% (1/101) 6.08 0.014674 0.04065
GO:1904949 ATPase complex 0.99% (1/101) 6.08 0.014674 0.04065
GO:0016514 SWI/SNF complex 0.99% (1/101) 6.08 0.014674 0.04065
GO:0005847 mRNA cleavage and polyadenylation specificity factor complex 0.99% (1/101) 6.08 0.014674 0.04065
GO:0070603 SWI/SNF superfamily-type complex 0.99% (1/101) 6.08 0.014674 0.04065
GO:0030307 positive regulation of cell growth 0.99% (1/101) 6.08 0.014674 0.04065
GO:0030863 cortical cytoskeleton 0.99% (1/101) 6.08 0.014674 0.04065
GO:0051125 regulation of actin nucleation 0.99% (1/101) 6.08 0.014674 0.04065
GO:0048281 inflorescence morphogenesis 0.99% (1/101) 6.08 0.014674 0.04065
GO:0051127 positive regulation of actin nucleation 0.99% (1/101) 6.08 0.014674 0.04065
GO:0008152 metabolic process 39.6% (40/101) 0.45 0.014804 0.040897
GO:0046527 glucosyltransferase activity 2.97% (3/101) 2.56 0.014576 0.041544
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups 2.97% (3/101) 2.54 0.015144 0.04172
GO:0040007 growth 6.93% (7/101) 1.43 0.015715 0.043173
GO:0007033 vacuole organization 1.98% (2/101) 3.3 0.017619 0.048269
GO:0044264 cellular polysaccharide metabolic process 5.94% (6/101) 1.53 0.017931 0.048988
GO:0098781 ncRNA transcription 0.99% (1/101) 5.76 0.018308 0.049204
GO:0016973 poly(A)+ mRNA export from nucleus 0.99% (1/101) 5.76 0.018308 0.049204
GO:0005849 mRNA cleavage factor complex 0.99% (1/101) 5.76 0.018308 0.049204
GO:0045995 regulation of embryonic development 0.99% (1/101) 5.76 0.018308 0.049204
GO:0043966 histone H3 acetylation 0.99% (1/101) 5.76 0.018308 0.049204
GO:0032588 trans-Golgi network membrane 0.99% (1/101) 5.76 0.018308 0.049204
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_7 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_48 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_66 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_89 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_92 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_93 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_120 0.023 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_176 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_205 0.03 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_207 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_223 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_233 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_123 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_138 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_154 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_165 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_169 0.019 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_184 0.023 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_199 0.032 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_200 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_62 0.023 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_76 0.022 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_85 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_91 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_99 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_108 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_125 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_146 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_156 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_160 0.062 Gene family Compare
Oryza sativa HCCA cluster Cluster_2 0.025 Gene family Compare
Oryza sativa HCCA cluster Cluster_26 0.071 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_149 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_174 0.087 Gene family Compare
Oryza sativa HCCA cluster Cluster_189 0.035 Gene family Compare
Oryza sativa HCCA cluster Cluster_194 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_217 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_248 0.035 Gene family Compare
Oryza sativa HCCA cluster Cluster_251 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_273 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_288 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_297 0.049 Gene family Compare
Oryza sativa HCCA cluster Cluster_304 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_317 0.03 Gene family Compare
Oryza sativa HCCA cluster Cluster_436 0.022 Gene family Compare
Picea abies HCCA cluster Cluster_10 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_57 0.076 Gene family Compare
Picea abies HCCA cluster Cluster_69 0.037 Gene family Compare
Picea abies HCCA cluster Cluster_82 0.119 Gene family Compare
Picea abies HCCA cluster Cluster_114 0.057 Gene family Compare
Picea abies HCCA cluster Cluster_212 0.031 Gene family Compare
Picea abies HCCA cluster Cluster_218 0.119 Gene family Compare
Picea abies HCCA cluster Cluster_231 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_235 0.043 Gene family Compare
Picea abies HCCA cluster Cluster_283 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_320 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_343 0.071 Gene family Compare
Picea abies HCCA cluster Cluster_359 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_397 0.027 Gene family Compare
Picea abies HCCA cluster Cluster_411 0.032 Gene family Compare
Picea abies HCCA cluster Cluster_422 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_434 0.035 Gene family Compare
Picea abies HCCA cluster Cluster_435 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_450 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_454 0.039 Gene family Compare
Picea abies HCCA cluster Cluster_460 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_461 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_462 0.037 Gene family Compare
Picea abies HCCA cluster Cluster_481 0.031 Gene family Compare
Picea abies HCCA cluster Cluster_493 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_70 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_74 0.144 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_91 0.047 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_92 0.022 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_95 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_104 0.032 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_111 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_140 0.02 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_158 0.027 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_189 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_37 0.214 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_77 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_99 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_128 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_147 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_174 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_176 0.022 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_217 0.063 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_235 0.022 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_250 0.034 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_262 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_264 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_268 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_270 0.045 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_274 0.036 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_290 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_293 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_308 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_46 0.023 Gene family Compare
Vitis vinifera HCCA cluster Cluster_82 0.137 Gene family Compare
Vitis vinifera HCCA cluster Cluster_103 0.122 Gene family Compare
Vitis vinifera HCCA cluster Cluster_118 0.029 Gene family Compare
Vitis vinifera HCCA cluster Cluster_136 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_156 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_165 0.063 Gene family Compare
Vitis vinifera HCCA cluster Cluster_193 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.049 Gene family Compare
Vitis vinifera HCCA cluster Cluster_224 0.036 Gene family Compare
Vitis vinifera HCCA cluster Cluster_226 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_232 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_241 0.043 Gene family Compare
Zea mays HCCA cluster Cluster_16 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_86 0.182 Gene family Compare
Zea mays HCCA cluster Cluster_139 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_185 0.074 Gene family Compare
Zea mays HCCA cluster Cluster_266 0.038 Gene family Compare
Zea mays HCCA cluster Cluster_271 0.046 Gene family Compare
Zea mays HCCA cluster Cluster_272 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_275 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_286 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_306 0.029 Gene family Compare
Zea mays HCCA cluster Cluster_322 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_330 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_349 0.031 Gene family Compare
Sequences (101) (download table)

InterPro Domains

GO Terms

Family Terms