Coexpression cluster: Cluster_84 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003677 DNA binding 14.55% (8/55) 3.38 1e-06 0.000184
GO:1901363 heterocyclic compound binding 29.09% (16/55) 1.5 8.7e-05 0.004489
GO:0097159 organic cyclic compound binding 29.09% (16/55) 1.5 8.7e-05 0.004489
GO:0005488 binding 41.82% (23/55) 1.19 4.5e-05 0.004616
GO:0003676 nucleic acid binding 16.36% (9/55) 2.12 0.000198 0.00817
GO:0000166 nucleotide binding 18.18% (10/55) 1.81 0.000471 0.012117
GO:1901265 nucleoside phosphate binding 18.18% (10/55) 1.81 0.000471 0.012117
GO:0036094 small molecule binding 18.18% (10/55) 1.74 0.000672 0.013838
GO:0004518 nuclease activity 5.45% (3/55) 4.35 0.000431 0.014781
GO:0035639 purine ribonucleoside triphosphate binding 16.36% (9/55) 1.88 0.000655 0.01499
GO:0003674 molecular_function 52.73% (29/55) 0.72 0.001169 0.015048
GO:0097367 carbohydrate derivative binding 16.36% (9/55) 1.77 0.001105 0.01517
GO:0032553 ribonucleotide binding 16.36% (9/55) 1.8 0.00097 0.01537
GO:0044237 cellular metabolic process 21.82% (12/55) 1.43 0.001286 0.015586
GO:0030554 adenyl nucleotide binding 14.55% (8/55) 1.85 0.001531 0.015766
GO:0005524 ATP binding 14.55% (8/55) 1.93 0.001077 0.015845
GO:0017076 purine nucleotide binding 16.36% (9/55) 1.81 0.000933 0.016017
GO:0018208 peptidyl-proline modification 3.64% (2/55) 5.0 0.001754 0.016425
GO:0000413 protein peptidyl-prolyl isomerization 3.64% (2/55) 5.0 0.001754 0.016425
GO:0044260 cellular macromolecule metabolic process 16.36% (9/55) 1.71 0.001525 0.016534
GO:0043168 anion binding 16.36% (9/55) 1.66 0.001958 0.016806
GO:0032555 purine ribonucleotide binding 16.36% (9/55) 1.82 0.000904 0.016935
GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 1.82% (1/55) 8.46 0.002832 0.017159
GO:0004529 exodeoxyribonuclease activity 1.82% (1/55) 8.46 0.002832 0.017159
GO:0019915 lipid storage 1.82% (1/55) 8.46 0.002832 0.017159
GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters 1.82% (1/55) 8.46 0.002832 0.017159
GO:0008297 single-stranded DNA exodeoxyribonuclease activity 1.82% (1/55) 8.46 0.002832 0.017159
GO:0004536 deoxyribonuclease activity 1.82% (1/55) 8.46 0.002832 0.017159
GO:0008409 5'-3' exonuclease activity 1.82% (1/55) 8.46 0.002832 0.017159
GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity 1.82% (1/55) 8.46 0.002832 0.017159
GO:0035312 5'-3' exodeoxyribonuclease activity 1.82% (1/55) 8.46 0.002832 0.017159
GO:0006260 DNA replication 3.64% (2/55) 4.94 0.001918 0.017176
GO:0032559 adenyl ribonucleotide binding 14.55% (8/55) 1.85 0.001506 0.017236
GO:0065008 regulation of biological quality 3.64% (2/55) 4.61 0.003044 0.017917
GO:0043170 macromolecule metabolic process 18.18% (10/55) 1.44 0.003246 0.018575
GO:0016788 hydrolase activity, acting on ester bonds 7.27% (4/55) 2.8 0.002606 0.021476
GO:0071704 organic substance metabolic process 21.82% (12/55) 1.17 0.005766 0.026395
GO:0018193 peptidyl-amino acid modification 3.64% (2/55) 4.25 0.004922 0.026681
GO:0043167 ion binding 20.0% (11/55) 1.27 0.004817 0.026818
GO:0140097 catalytic activity, acting on DNA 3.64% (2/55) 4.14 0.005733 0.026841
GO:0032324 molybdopterin cofactor biosynthetic process 1.82% (1/55) 7.46 0.005656 0.027097
GO:0006471 protein ADP-ribosylation 1.82% (1/55) 7.46 0.005656 0.027097
GO:0004602 glutathione peroxidase activity 1.82% (1/55) 7.46 0.005656 0.027097
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 3.64% (2/55) 4.18 0.005456 0.028099
GO:0016859 cis-trans isomerase activity 3.64% (2/55) 4.18 0.005456 0.028099
GO:0006807 nitrogen compound metabolic process 18.18% (10/55) 1.3 0.006446 0.028867
GO:0051235 maintenance of location 1.82% (1/55) 6.88 0.008472 0.03636
GO:0005681 spliceosomal complex 1.82% (1/55) 6.88 0.008472 0.03636
GO:0032273 positive regulation of protein polymerization 1.82% (1/55) 6.46 0.011281 0.038731
GO:0031334 positive regulation of protein-containing complex assembly 1.82% (1/55) 6.46 0.011281 0.038731
GO:0030838 positive regulation of actin filament polymerization 1.82% (1/55) 6.46 0.011281 0.038731
GO:0034314 Arp2/3 complex-mediated actin nucleation 1.82% (1/55) 6.46 0.011281 0.038731
GO:0005885 Arp2/3 protein complex 1.82% (1/55) 6.46 0.011281 0.038731
GO:0010638 positive regulation of organelle organization 1.82% (1/55) 6.46 0.011281 0.038731
GO:0007015 actin filament organization 1.82% (1/55) 6.46 0.011281 0.038731
GO:0044089 positive regulation of cellular component biogenesis 1.82% (1/55) 6.46 0.011281 0.038731
GO:0051495 positive regulation of cytoskeleton organization 1.82% (1/55) 6.46 0.011281 0.038731
GO:1902905 positive regulation of supramolecular fiber organization 1.82% (1/55) 6.46 0.011281 0.038731
GO:0097435 supramolecular fiber organization 1.82% (1/55) 6.46 0.011281 0.038731
GO:0045010 actin nucleation 1.82% (1/55) 6.46 0.011281 0.038731
GO:0008152 metabolic process 21.82% (12/55) 1.03 0.012008 0.04055
GO:0046483 heterocycle metabolic process 9.09% (5/55) 1.84 0.012677 0.042121
GO:0043545 molybdopterin cofactor metabolic process 1.82% (1/55) 6.14 0.014081 0.043951
GO:0051130 positive regulation of cellular component organization 1.82% (1/55) 6.14 0.014081 0.043951
GO:0051189 prosthetic group metabolic process 1.82% (1/55) 6.14 0.014081 0.043951
GO:0009987 cellular process 23.64% (13/55) 0.95 0.013528 0.044234
GO:1901360 organic cyclic compound metabolic process 9.09% (5/55) 1.79 0.014497 0.044574
GO:0110053 regulation of actin filament organization 1.82% (1/55) 5.66 0.019659 0.047091
GO:0051493 regulation of cytoskeleton organization 1.82% (1/55) 5.66 0.019659 0.047091
GO:0043254 regulation of protein-containing complex assembly 1.82% (1/55) 5.66 0.019659 0.047091
GO:1902903 regulation of supramolecular fiber organization 1.82% (1/55) 5.66 0.019659 0.047091
GO:0090066 regulation of anatomical structure size 1.82% (1/55) 5.66 0.019659 0.047091
GO:0032970 regulation of actin filament-based process 1.82% (1/55) 5.66 0.019659 0.047091
GO:0032956 regulation of actin cytoskeleton organization 1.82% (1/55) 5.66 0.019659 0.047091
GO:0032535 regulation of cellular component size 1.82% (1/55) 5.66 0.019659 0.047091
GO:0032271 regulation of protein polymerization 1.82% (1/55) 5.66 0.019659 0.047091
GO:0048522 positive regulation of cellular process 1.82% (1/55) 5.66 0.019659 0.047091
GO:0030833 regulation of actin filament polymerization 1.82% (1/55) 5.66 0.019659 0.047091
GO:0030832 regulation of actin filament length 1.82% (1/55) 5.66 0.019659 0.047091
GO:0008064 regulation of actin polymerization or depolymerization 1.82% (1/55) 5.66 0.019659 0.047091
GO:0017025 TBP-class protein binding 1.82% (1/55) 5.66 0.019659 0.047091
GO:0140296 general transcription initiation factor binding 1.82% (1/55) 5.66 0.019659 0.047091
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_108 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_145 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_186 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_205 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_255 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_268 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_9 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_84 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_117 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_178 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_208 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_249 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_262 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_42 0.026 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_94 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_179 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_129 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_143 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_11 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_173 0.036 Archaeplastida Compare
Oryza sativa HCCA Cluster_362 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_368 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_91 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_270 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_31 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_260 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_384 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_399 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_443 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_109 0.026 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_128 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_171 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_198 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_65 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_126 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_235 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_14 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_68 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_103 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_51 0.038 Archaeplastida Compare
Zea mays HCCA Cluster_101 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_220 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_351 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_145 0.019 LandPlants Compare
Amborella trichopoda HCCA Cluster_168 0.014 LandPlants Compare
Amborella trichopoda HCCA Cluster_179 0.018 LandPlants Compare
Amborella trichopoda HCCA Cluster_186 0.018 LandPlants Compare
Amborella trichopoda HCCA Cluster_228 0.016 LandPlants Compare
Amborella trichopoda HCCA Cluster_255 0.019 LandPlants Compare
Amborella trichopoda HCCA Cluster_268 0.021 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_11 0.016 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_160 0.016 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_178 0.019 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_208 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_253 0.018 LandPlants Compare
Gingko biloba HCCA Cluster_10 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_202 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_341 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_223 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_321 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_339 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_362 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_368 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_499 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_17 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_160 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_219 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_234 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_270 0.02 LandPlants Compare
Physcomitrella patens HCCA Cluster_290 0.015 LandPlants Compare
Picea abies HCCA Cluster_31 0.019 LandPlants Compare
Picea abies HCCA Cluster_443 0.019 LandPlants Compare
Picea abies HCCA Cluster_446 0.018 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_109 0.025 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_128 0.019 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_157 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_169 0.017 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_171 0.02 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_198 0.017 LandPlants Compare
Solanum lycopersicum HCCA Cluster_126 0.024 LandPlants Compare
Solanum lycopersicum HCCA Cluster_157 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_202 0.022 LandPlants Compare
Solanum lycopersicum HCCA Cluster_244 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_14 0.022 LandPlants Compare
Vitis vinifera HCCA Cluster_68 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_103 0.02 LandPlants Compare
Vitis vinifera HCCA Cluster_130 0.016 LandPlants Compare
Zea mays HCCA Cluster_8 0.016 LandPlants Compare
Zea mays HCCA Cluster_51 0.027 LandPlants Compare
Zea mays HCCA Cluster_92 0.017 LandPlants Compare
Zea mays HCCA Cluster_101 0.02 LandPlants Compare
Zea mays HCCA Cluster_160 0.016 LandPlants Compare
Zea mays HCCA Cluster_351 0.017 LandPlants Compare
Zea mays HCCA Cluster_369 0.017 LandPlants Compare
Sequences (55) (download table)

InterPro Domains

GO Terms

Family Terms