Coexpression cluster: Cluster_76 (HCCA cluster)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006518 peptide metabolic process 16.67% (8/48) 5.16 0.0 0.0
GO:0032991 protein-containing complex 22.92% (11/48) 4.06 0.0 0.0
GO:0005198 structural molecule activity 16.67% (8/48) 5.12 0.0 0.0
GO:0043604 amide biosynthetic process 16.67% (8/48) 5.16 0.0 0.0
GO:0043043 peptide biosynthetic process 16.67% (8/48) 5.25 0.0 0.0
GO:0043603 cellular amide metabolic process 16.67% (8/48) 5.06 0.0 0.0
GO:0003735 structural constituent of ribosome 16.67% (8/48) 5.26 0.0 0.0
GO:0006412 translation 16.67% (8/48) 5.27 0.0 0.0
GO:0044424 intracellular part 22.92% (11/48) 3.57 0.0 0.0
GO:0005840 ribosome 14.58% (7/48) 5.1 0.0 0.0
GO:0043228 non-membrane-bounded organelle 14.58% (7/48) 4.97 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 14.58% (7/48) 4.99 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 16.67% (8/48) 4.4 0.0 0.0
GO:1990904 ribonucleoprotein complex 14.58% (7/48) 4.9 0.0 0.0
GO:0044464 cell part 22.92% (11/48) 3.42 0.0 0.0
GO:0009059 macromolecule biosynthetic process 16.67% (8/48) 4.28 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 16.67% (8/48) 4.12 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 16.67% (8/48) 4.07 0.0 0.0
GO:0044444 cytoplasmic part 14.58% (7/48) 4.13 0.0 1e-06
GO:0005622 intracellular 10.42% (5/48) 5.29 0.0 1e-06
GO:0043226 organelle 14.58% (7/48) 3.89 0.0 2e-06
GO:0043229 intracellular organelle 14.58% (7/48) 3.9 0.0 2e-06
GO:0044249 cellular biosynthetic process 16.67% (8/48) 3.32 1e-06 5e-06
GO:1901576 organic substance biosynthetic process 16.67% (8/48) 3.23 2e-06 7e-06
GO:0034641 cellular nitrogen compound metabolic process 16.67% (8/48) 3.15 3e-06 1.1e-05
GO:0005575 cellular_component 25.0% (12/48) 2.33 3e-06 1.1e-05
GO:0009058 biosynthetic process 16.67% (8/48) 3.09 4e-06 1.4e-05
GO:0044267 cellular protein metabolic process 18.75% (9/48) 2.75 6e-06 2e-05
GO:0019538 protein metabolic process 18.75% (9/48) 2.45 3.2e-05 0.000102
GO:0044260 cellular macromolecule metabolic process 18.75% (9/48) 2.38 4.7e-05 0.000145
GO:0032993 protein-DNA complex 6.25% (3/48) 5.13 9.1e-05 0.00026
GO:0000786 nucleosome 6.25% (3/48) 5.13 9.1e-05 0.00026
GO:0044815 DNA packaging complex 6.25% (3/48) 5.1 9.7e-05 0.000271
GO:0044427 chromosomal part 6.25% (3/48) 4.88 0.000151 0.000409
GO:1901564 organonitrogen compound metabolic process 18.75% (9/48) 2.11 0.000195 0.000512
GO:0044422 organelle part 8.33% (4/48) 3.77 0.000219 0.000543
GO:0044446 intracellular organelle part 8.33% (4/48) 3.78 0.000213 0.000544
GO:0043170 macromolecule metabolic process 18.75% (9/48) 2.02 0.000314 0.000761
GO:0006807 nitrogen compound metabolic process 18.75% (9/48) 1.85 0.000746 0.00176
GO:0044237 cellular metabolic process 18.75% (9/48) 1.77 0.001063 0.002444
GO:0044238 primary metabolic process 18.75% (9/48) 1.49 0.004024 0.009029
GO:0009055 electron transfer activity 4.17% (2/48) 4.3 0.004733 0.010367
GO:0071704 organic substance metabolic process 18.75% (9/48) 1.42 0.005679 0.012151
GO:0009987 cellular process 18.75% (9/48) 1.4 0.006032 0.012613
GO:0016592 mediator complex 2.08% (1/48) 6.73 0.009403 0.018807
GO:0006357 regulation of transcription by RNA polymerase II 2.08% (1/48) 6.73 0.009403 0.018807
GO:0004576 oligosaccharyl transferase activity 2.08% (1/48) 6.53 0.01074 0.021022
GO:0003712 transcription coregulator activity 2.08% (1/48) 6.36 0.012074 0.023142
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_26 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_85 0.07 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_150 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_152 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_196 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_211 0.064 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_43 0.071 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_69 0.031 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_27 0.057 Gene family Compare
Oryza sativa HCCA cluster Cluster_3 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_78 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_81 0.039 Gene family Compare
Oryza sativa HCCA cluster Cluster_119 0.031 Gene family Compare
Oryza sativa HCCA cluster Cluster_167 0.027 Gene family Compare
Oryza sativa HCCA cluster Cluster_256 0.03 Gene family Compare
Oryza sativa HCCA cluster Cluster_325 0.022 Gene family Compare
Picea abies HCCA cluster Cluster_118 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_276 0.03 Gene family Compare
Picea abies HCCA cluster Cluster_398 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_67 0.049 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_13 0.026 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_16 0.053 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_47 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_148 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_230 0.027 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_240 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_288 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_26 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_47 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_61 0.045 Gene family Compare
Vitis vinifera HCCA cluster Cluster_69 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_77 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_91 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_107 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_155 0.037 Gene family Compare
Zea mays HCCA cluster Cluster_54 0.05 Gene family Compare
Zea mays HCCA cluster Cluster_56 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_140 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_162 0.054 Gene family Compare
Zea mays HCCA cluster Cluster_193 0.029 Gene family Compare
Zea mays HCCA cluster Cluster_203 0.047 Gene family Compare
Zea mays HCCA cluster Cluster_274 0.035 Gene family Compare
Zea mays HCCA cluster Cluster_294 0.025 Gene family Compare
Zea mays HCCA cluster Cluster_342 0.017 Gene family Compare
Sequences (48) (download table)

InterPro Domains

GO Terms

Family Terms