Coexpression cluster: Cluster_4 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 15.71% (11/70) 2.06 5.8e-05 0.011022
GO:0019222 regulation of metabolic process 7.14% (5/70) 2.79 0.000775 0.024415
GO:0005488 binding 34.29% (24/70) 0.9 0.001074 0.025377
GO:0008380 RNA splicing 2.86% (2/70) 5.42 0.000974 0.026287
GO:0031323 regulation of cellular metabolic process 7.14% (5/70) 2.88 0.000586 0.027697
GO:0060255 regulation of macromolecule metabolic process 7.14% (5/70) 2.8 0.000758 0.028645
GO:2000112 regulation of cellular macromolecule biosynthetic process 5.71% (4/70) 2.66 0.003753 0.032246
GO:0010556 regulation of macromolecule biosynthetic process 5.71% (4/70) 2.66 0.003753 0.032246
GO:0031326 regulation of cellular biosynthetic process 5.71% (4/70) 2.66 0.003753 0.032246
GO:0009889 regulation of biosynthetic process 5.71% (4/70) 2.66 0.003753 0.032246
GO:0080090 regulation of primary metabolic process 7.14% (5/70) 2.91 0.000545 0.03433
GO:0051171 regulation of nitrogen compound metabolic process 7.14% (5/70) 2.91 0.000545 0.03433
GO:0065007 biological regulation 7.14% (5/70) 2.22 0.004414 0.034764
GO:0010468 regulation of gene expression 5.71% (4/70) 2.59 0.004395 0.036117
GO:0043189 H4/H2A histone acetyltransferase complex 1.43% (1/70) 8.12 0.003604 0.037846
GO:1902562 H4 histone acetyltransferase complex 1.43% (1/70) 8.12 0.003604 0.037846
GO:0019219 regulation of nucleobase-containing compound metabolic process 5.71% (4/70) 2.68 0.00353 0.041701
GO:0051252 regulation of RNA metabolic process 5.71% (4/70) 2.69 0.003458 0.04357
GO:1903506 regulation of nucleic acid-templated transcription 5.71% (4/70) 2.69 0.003458 0.04357
GO:2001141 regulation of RNA biosynthetic process 5.71% (4/70) 2.69 0.003458 0.04357
GO:0006355 regulation of transcription, DNA-templated 5.71% (4/70) 2.69 0.003458 0.04357
GO:0006397 mRNA processing 2.86% (2/70) 4.12 0.005923 0.044781
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_111 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_179 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_206 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_10 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_34 0.049 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_74 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_89 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_136 0.041 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_208 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_229 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_230 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_258 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_279 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_17 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_142 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_191 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_70 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_77 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_105 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_163 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_267 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_298 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_317 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_330 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_119 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_149 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_10 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_59 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_73 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_109 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_166 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_173 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_227 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_265 0.05 Archaeplastida Compare
Oryza sativa HCCA Cluster_268 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_324 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_14 0.039 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_56 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_205 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_236 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_298 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_305 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_86 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_261 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_286 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_505 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_536 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_145 0.048 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_171 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_9 0.04 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_147 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_178 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_208 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_214 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_229 0.039 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_267 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_270 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_280 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_48 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_70 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_74 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_88 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_113 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_156 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_169 0.041 Archaeplastida Compare
Vitis vinifera HCCA Cluster_194 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_210 0.033 Archaeplastida Compare
Zea mays HCCA Cluster_28 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_43 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_87 0.034 Archaeplastida Compare
Zea mays HCCA Cluster_104 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_172 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_202 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_218 0.048 Archaeplastida Compare
Zea mays HCCA Cluster_232 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_236 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_304 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_338 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_93 0.015 LandPlants Compare
Amborella trichopoda HCCA Cluster_106 0.016 LandPlants Compare
Amborella trichopoda HCCA Cluster_111 0.02 LandPlants Compare
Amborella trichopoda HCCA Cluster_159 0.016 LandPlants Compare
Amborella trichopoda HCCA Cluster_179 0.016 LandPlants Compare
Amborella trichopoda HCCA Cluster_200 0.017 LandPlants Compare
Amborella trichopoda HCCA Cluster_257 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_4 0.014 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_10 0.02 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_34 0.042 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_56 0.016 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_74 0.018 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_89 0.016 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_112 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_132 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_136 0.04 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_172 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_200 0.016 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_208 0.023 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_229 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_230 0.021 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_258 0.029 LandPlants Compare
Gingko biloba HCCA Cluster_68 0.018 LandPlants Compare
Gingko biloba HCCA Cluster_105 0.024 LandPlants Compare
Gingko biloba HCCA Cluster_118 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_129 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_163 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_166 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_190 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_267 0.024 LandPlants Compare
Gingko biloba HCCA Cluster_273 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_292 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_330 0.021 LandPlants Compare
Marchantia polymorpha HCCA Cluster_119 0.022 LandPlants Compare
Marchantia polymorpha HCCA Cluster_145 0.018 LandPlants Compare
Marchantia polymorpha HCCA Cluster_149 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_10 0.025 LandPlants Compare
Oryza sativa HCCA Cluster_20 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_73 0.02 LandPlants Compare
Oryza sativa HCCA Cluster_109 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_124 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_166 0.031 LandPlants Compare
Oryza sativa HCCA Cluster_265 0.041 LandPlants Compare
Oryza sativa HCCA Cluster_283 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_301 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_373 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_376 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_14 0.038 LandPlants Compare
Physcomitrella patens HCCA Cluster_169 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_199 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_205 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_236 0.022 LandPlants Compare
Physcomitrella patens HCCA Cluster_261 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_269 0.018 LandPlants Compare
Physcomitrella patens HCCA Cluster_298 0.027 LandPlants Compare
Physcomitrella patens HCCA Cluster_305 0.025 LandPlants Compare
Picea abies HCCA Cluster_234 0.017 LandPlants Compare
Picea abies HCCA Cluster_256 0.015 LandPlants Compare
Picea abies HCCA Cluster_284 0.015 LandPlants Compare
Picea abies HCCA Cluster_286 0.028 LandPlants Compare
Picea abies HCCA Cluster_505 0.022 LandPlants Compare
Picea abies HCCA Cluster_507 0.017 LandPlants Compare
Picea abies HCCA Cluster_536 0.022 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_106 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_145 0.041 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_173 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_9 0.04 LandPlants Compare
Solanum lycopersicum HCCA Cluster_36 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_147 0.018 LandPlants Compare
Solanum lycopersicum HCCA Cluster_178 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_214 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_229 0.03 LandPlants Compare
Solanum lycopersicum HCCA Cluster_244 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_262 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_267 0.036 LandPlants Compare
Solanum lycopersicum HCCA Cluster_270 0.017 LandPlants Compare
Solanum lycopersicum HCCA Cluster_280 0.031 LandPlants Compare
Solanum lycopersicum HCCA Cluster_282 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_70 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_74 0.024 LandPlants Compare
Vitis vinifera HCCA Cluster_107 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_110 0.017 LandPlants Compare
Vitis vinifera HCCA Cluster_113 0.02 LandPlants Compare
Vitis vinifera HCCA Cluster_145 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_156 0.033 LandPlants Compare
Vitis vinifera HCCA Cluster_169 0.041 LandPlants Compare
Vitis vinifera HCCA Cluster_210 0.025 LandPlants Compare
Vitis vinifera HCCA Cluster_226 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_237 0.014 LandPlants Compare
Zea mays HCCA Cluster_17 0.016 LandPlants Compare
Zea mays HCCA Cluster_28 0.017 LandPlants Compare
Zea mays HCCA Cluster_43 0.016 LandPlants Compare
Zea mays HCCA Cluster_87 0.033 LandPlants Compare
Zea mays HCCA Cluster_104 0.023 LandPlants Compare
Zea mays HCCA Cluster_172 0.025 LandPlants Compare
Zea mays HCCA Cluster_202 0.019 LandPlants Compare
Zea mays HCCA Cluster_207 0.016 LandPlants Compare
Zea mays HCCA Cluster_218 0.039 LandPlants Compare
Zea mays HCCA Cluster_232 0.019 LandPlants Compare
Zea mays HCCA Cluster_268 0.016 LandPlants Compare
Zea mays HCCA Cluster_302 0.018 LandPlants Compare
Zea mays HCCA Cluster_304 0.029 LandPlants Compare
Zea mays HCCA Cluster_350 0.015 LandPlants Compare
Sequences (70) (download table)

InterPro Domains

GO Terms

Family Terms