Coexpression cluster: Cluster_132 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 22.41% (13/58) 2.57 0.0 2.9e-05
GO:1901363 heterocyclic compound binding 34.48% (20/58) 1.75 1e-06 3.2e-05
GO:0097159 organic cyclic compound binding 34.48% (20/58) 1.75 1e-06 3.2e-05
GO:0032553 ribonucleotide binding 20.69% (12/58) 2.14 1.3e-05 0.00029
GO:0035639 purine ribonucleoside triphosphate binding 20.69% (12/58) 2.22 7e-06 0.000291
GO:0097367 carbohydrate derivative binding 20.69% (12/58) 2.11 1.6e-05 0.000305
GO:0017076 purine nucleotide binding 20.69% (12/58) 2.15 1.2e-05 0.00032
GO:0032555 purine ribonucleotide binding 20.69% (12/58) 2.15 1.2e-05 0.000368
GO:0005488 binding 41.38% (24/58) 1.17 3.8e-05 0.000496
GO:0043168 anion binding 20.69% (12/58) 1.99 3.5e-05 0.000502
GO:1901265 nucleoside phosphate binding 20.69% (12/58) 2.0 3.5e-05 0.000547
GO:0000166 nucleotide binding 20.69% (12/58) 2.0 3.5e-05 0.000547
GO:0036094 small molecule binding 20.69% (12/58) 1.93 5.4e-05 0.000656
GO:0004386 helicase activity 5.17% (3/58) 4.93 0.000129 0.001451
GO:0017111 nucleoside-triphosphatase activity 10.34% (6/58) 2.91 0.000142 0.001485
GO:0016817 hydrolase activity, acting on acid anhydrides 10.34% (6/58) 2.84 0.000187 0.001634
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 10.34% (6/58) 2.84 0.000184 0.001697
GO:0016462 pyrophosphatase activity 10.34% (6/58) 2.85 0.000177 0.001734
GO:0140097 catalytic activity, acting on DNA 5.17% (3/58) 4.65 0.000231 0.001908
GO:0003723 RNA binding 8.62% (5/58) 3.13 0.000262 0.002058
GO:0001882 nucleoside binding 6.9% (4/58) 3.46 0.000484 0.002922
GO:0032550 purine ribonucleoside binding 6.9% (4/58) 3.46 0.000484 0.002922
GO:0001883 purine nucleoside binding 6.9% (4/58) 3.46 0.000484 0.002922
GO:0005525 GTP binding 6.9% (4/58) 3.46 0.000484 0.002922
GO:0032549 ribonucleoside binding 6.9% (4/58) 3.46 0.000484 0.002922
GO:0032561 guanyl ribonucleotide binding 6.9% (4/58) 3.46 0.000484 0.002922
GO:0019001 guanyl nucleotide binding 6.9% (4/58) 3.43 0.000515 0.002992
GO:0003678 DNA helicase activity 3.45% (2/58) 5.69 0.000669 0.003753
GO:0016887 ATPase activity 6.9% (4/58) 3.28 0.000769 0.004025
GO:0043167 ion binding 22.41% (13/58) 1.44 0.000751 0.004067
GO:0005524 ATP binding 13.79% (8/58) 1.85 0.001534 0.007768
GO:0030554 adenyl nucleotide binding 13.79% (8/58) 1.77 0.002168 0.01001
GO:0016072 rRNA metabolic process 3.45% (2/58) 4.8 0.002319 0.010114
GO:0006364 rRNA processing 3.45% (2/58) 4.8 0.002319 0.010114
GO:0032559 adenyl ribonucleotide binding 13.79% (8/58) 1.78 0.002134 0.01015
GO:0006139 nucleobase-containing compound metabolic process 10.34% (6/58) 2.17 0.002069 0.010153
GO:0031167 rRNA methylation 1.72% (1/58) 8.39 0.002986 0.010656
GO:0036265 RNA (guanine-N7)-methylation 1.72% (1/58) 8.39 0.002986 0.010656
GO:0070475 rRNA base methylation 1.72% (1/58) 8.39 0.002986 0.010656
GO:0016435 rRNA (guanine) methyltransferase activity 1.72% (1/58) 8.39 0.002986 0.010656
GO:0003911 DNA ligase (NAD+) activity 1.72% (1/58) 8.39 0.002986 0.010656
GO:0003724 RNA helicase activity 1.72% (1/58) 8.39 0.002986 0.010656
GO:0000154 rRNA modification 1.72% (1/58) 8.39 0.002986 0.010656
GO:0070476 rRNA (guanine-N7)-methylation 1.72% (1/58) 8.39 0.002986 0.010656
GO:0034641 cellular nitrogen compound metabolic process 12.07% (7/58) 1.84 0.003222 0.011242
GO:0006725 cellular aromatic compound metabolic process 10.34% (6/58) 2.03 0.00344 0.01149
GO:0046483 heterocycle metabolic process 10.34% (6/58) 2.03 0.00344 0.01149
GO:1901360 organic cyclic compound metabolic process 10.34% (6/58) 1.98 0.004059 0.013277
GO:0090304 nucleic acid metabolic process 8.62% (5/58) 2.2 0.004571 0.014647
GO:0006396 RNA processing 5.17% (3/58) 3.02 0.006071 0.017983
GO:0140102 catalytic activity, acting on a rRNA 1.72% (1/58) 7.39 0.005964 0.018007
GO:0000178 exosome (RNase complex) 1.72% (1/58) 7.39 0.005964 0.018007
GO:0008649 rRNA methyltransferase activity 1.72% (1/58) 7.39 0.005964 0.018007
GO:0140098 catalytic activity, acting on RNA 5.17% (3/58) 3.01 0.006207 0.018046
GO:0003674 molecular_function 48.28% (28/58) 0.59 0.007223 0.020617
GO:0016787 hydrolase activity 13.79% (8/58) 1.47 0.007672 0.021508
GO:0016070 RNA metabolic process 6.9% (4/58) 2.29 0.009056 0.024513
GO:1905354 exoribonuclease complex 1.72% (1/58) 6.8 0.008933 0.024605
GO:0003909 DNA ligase activity 1.72% (1/58) 6.39 0.011893 0.031648
GO:0034470 ncRNA processing 3.45% (2/58) 3.58 0.012174 0.031854
GO:0001510 RNA methylation 1.72% (1/58) 6.07 0.014845 0.038207
GO:0032040 small-subunit processome 1.72% (1/58) 5.8 0.017788 0.044328
GO:0016886 ligase activity, forming phosphoric ester bonds 1.72% (1/58) 5.8 0.017788 0.044328
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_96 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_180 0.036 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_228 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_254 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_267 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_7 0.037 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_114 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_136 0.045 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_152 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_156 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_192 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_199 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_243 0.037 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_275 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_10 0.042 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_36 0.055 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_111 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_125 0.039 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_49 0.041 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_73 0.076 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_80 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_167 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_210 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_10 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_97 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_134 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_210 0.043 Archaeplastida Compare
Oryza sativa HCCA Cluster_255 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_262 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_291 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_308 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_312 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_320 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_380 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_129 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_203 0.092 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_210 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_212 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_229 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.072 Archaeplastida Compare
Picea abies HCCA Cluster_40 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_276 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_388 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_390 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_426 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_484 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_37 0.04 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_73 0.034 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_85 0.038 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_175 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_196 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_9 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_29 0.039 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.059 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_147 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_197 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_270 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_274 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_3 0.05 Archaeplastida Compare
Vitis vinifera HCCA Cluster_87 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_101 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_105 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_159 0.052 Archaeplastida Compare
Vitis vinifera HCCA Cluster_190 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_102 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_127 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_162 0.033 Archaeplastida Compare
Zea mays HCCA Cluster_213 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.052 Archaeplastida Compare
Zea mays HCCA Cluster_345 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.019 LandPlants Compare
Amborella trichopoda HCCA Cluster_180 0.03 LandPlants Compare
Amborella trichopoda HCCA Cluster_228 0.021 LandPlants Compare
Amborella trichopoda HCCA Cluster_241 0.016 LandPlants Compare
Amborella trichopoda HCCA Cluster_249 0.018 LandPlants Compare
Amborella trichopoda HCCA Cluster_254 0.027 LandPlants Compare
Amborella trichopoda HCCA Cluster_267 0.02 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_7 0.032 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_63 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_114 0.023 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_136 0.035 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_152 0.033 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_156 0.022 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_191 0.018 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_192 0.029 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_199 0.022 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_243 0.026 LandPlants Compare
Gingko biloba HCCA Cluster_167 0.019 LandPlants Compare
Gingko biloba HCCA Cluster_267 0.017 LandPlants Compare
Gingko biloba HCCA Cluster_301 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_10 0.027 LandPlants Compare
Oryza sativa HCCA Cluster_97 0.024 LandPlants Compare
Oryza sativa HCCA Cluster_134 0.02 LandPlants Compare
Oryza sativa HCCA Cluster_185 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_210 0.036 LandPlants Compare
Oryza sativa HCCA Cluster_255 0.019 LandPlants Compare
Oryza sativa HCCA Cluster_262 0.019 LandPlants Compare
Oryza sativa HCCA Cluster_291 0.028 LandPlants Compare
Oryza sativa HCCA Cluster_308 0.022 LandPlants Compare
Oryza sativa HCCA Cluster_312 0.027 LandPlants Compare
Oryza sativa HCCA Cluster_320 0.026 LandPlants Compare
Oryza sativa HCCA Cluster_353 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_380 0.019 LandPlants Compare
Physcomitrella patens HCCA Cluster_129 0.025 LandPlants Compare
Physcomitrella patens HCCA Cluster_203 0.09 LandPlants Compare
Physcomitrella patens HCCA Cluster_210 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_212 0.019 LandPlants Compare
Physcomitrella patens HCCA Cluster_229 0.032 LandPlants Compare
Physcomitrella patens HCCA Cluster_275 0.064 LandPlants Compare
Physcomitrella patens HCCA Cluster_300 0.017 LandPlants Compare
Picea abies HCCA Cluster_40 0.02 LandPlants Compare
Picea abies HCCA Cluster_256 0.016 LandPlants Compare
Picea abies HCCA Cluster_276 0.017 LandPlants Compare
Picea abies HCCA Cluster_286 0.015 LandPlants Compare
Picea abies HCCA Cluster_358 0.015 LandPlants Compare
Picea abies HCCA Cluster_388 0.019 LandPlants Compare
Picea abies HCCA Cluster_390 0.019 LandPlants Compare
Picea abies HCCA Cluster_426 0.016 LandPlants Compare
Picea abies HCCA Cluster_466 0.015 LandPlants Compare
Picea abies HCCA Cluster_477 0.017 LandPlants Compare
Picea abies HCCA Cluster_478 0.017 LandPlants Compare
Picea abies HCCA Cluster_484 0.024 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_20 0.018 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_37 0.033 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_73 0.034 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_85 0.032 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_109 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_175 0.018 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_196 0.018 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_200 0.017 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_284 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_9 0.021 LandPlants Compare
Solanum lycopersicum HCCA Cluster_29 0.039 LandPlants Compare
Solanum lycopersicum HCCA Cluster_76 0.017 LandPlants Compare
Solanum lycopersicum HCCA Cluster_119 0.058 LandPlants Compare
Solanum lycopersicum HCCA Cluster_147 0.019 LandPlants Compare
Solanum lycopersicum HCCA Cluster_197 0.02 LandPlants Compare
Solanum lycopersicum HCCA Cluster_255 0.017 LandPlants Compare
Solanum lycopersicum HCCA Cluster_270 0.019 LandPlants Compare
Solanum lycopersicum HCCA Cluster_274 0.018 LandPlants Compare
Vitis vinifera HCCA Cluster_3 0.049 LandPlants Compare
Vitis vinifera HCCA Cluster_87 0.019 LandPlants Compare
Vitis vinifera HCCA Cluster_101 0.036 LandPlants Compare
Vitis vinifera HCCA Cluster_105 0.024 LandPlants Compare
Vitis vinifera HCCA Cluster_159 0.04 LandPlants Compare
Vitis vinifera HCCA Cluster_190 0.026 LandPlants Compare
Zea mays HCCA Cluster_102 0.022 LandPlants Compare
Zea mays HCCA Cluster_140 0.017 LandPlants Compare
Zea mays HCCA Cluster_162 0.033 LandPlants Compare
Zea mays HCCA Cluster_213 0.02 LandPlants Compare
Zea mays HCCA Cluster_238 0.018 LandPlants Compare
Zea mays HCCA Cluster_277 0.015 LandPlants Compare
Zea mays HCCA Cluster_318 0.045 LandPlants Compare
Zea mays HCCA Cluster_345 0.019 LandPlants Compare
Zea mays HCCA Cluster_364 0.017 LandPlants Compare
Sequences (58) (download table)

InterPro Domains

GO Terms

Family Terms