Coexpression cluster: Cluster_116 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043603 cellular amide metabolic process 8.2% (5/61) 3.24 0.000184 0.004062
GO:0006518 peptide metabolic process 8.2% (5/61) 3.28 0.000164 0.004148
GO:1901576 organic substance biosynthetic process 13.11% (8/61) 2.38 0.000143 0.004225
GO:0009059 macromolecule biosynthetic process 9.84% (6/61) 2.77 0.000248 0.004386
GO:0032991 protein-containing complex 11.48% (7/61) 2.69 0.000102 0.004531
GO:0005198 structural molecule activity 8.2% (5/61) 3.17 0.000234 0.004601
GO:0009058 biosynthetic process 13.11% (8/61) 2.22 0.000291 0.00468
GO:0003735 structural constituent of ribosome 8.2% (5/61) 3.33 0.000138 0.004879
GO:0003723 RNA binding 8.2% (5/61) 3.06 0.000332 0.004903
GO:0044271 cellular nitrogen compound biosynthetic process 11.48% (7/61) 2.81 6e-05 0.005346
GO:0016272 prefoldin complex 3.28% (2/61) 6.99 9.6e-05 0.005691
GO:0034641 cellular nitrogen compound metabolic process 16.39% (10/61) 2.28 3.3e-05 0.005926
GO:0044249 cellular biosynthetic process 11.48% (7/61) 2.27 0.000593 0.008074
GO:0005575 cellular_component 21.31% (13/61) 1.44 0.000782 0.009881
GO:0019843 rRNA binding 3.28% (2/61) 5.51 0.000862 0.01017
GO:0051082 unfolded protein binding 3.28% (2/61) 5.23 0.00128 0.01259
GO:0034645 cellular macromolecule biosynthetic process 8.2% (5/61) 2.64 0.001226 0.012767
GO:0140513 nuclear protein-containing complex 4.92% (3/61) 3.83 0.001224 0.013543
GO:0006412 translation 6.56% (4/61) 3.03 0.001465 0.013645
GO:0043604 amide biosynthetic process 6.56% (4/61) 2.97 0.001682 0.014178
GO:0043043 peptide biosynthetic process 6.56% (4/61) 2.99 0.001607 0.014225
GO:0006457 protein folding 3.28% (2/61) 4.92 0.001961 0.015777
GO:0044237 cellular metabolic process 19.67% (12/61) 1.28 0.003252 0.023981
GO:0000350 generation of catalytic spliceosome for second transesterification step 1.64% (1/61) 8.31 0.003141 0.024171
GO:0006807 nitrogen compound metabolic process 18.03% (11/61) 1.29 0.004671 0.033067
GO:0015934 large ribosomal subunit 1.64% (1/61) 7.31 0.006272 0.035812
GO:0009143 nucleoside triphosphate catabolic process 1.64% (1/61) 7.31 0.006272 0.035812
GO:0044391 ribosomal subunit 1.64% (1/61) 7.31 0.006272 0.035812
GO:0005849 mRNA cleavage factor complex 1.64% (1/61) 7.31 0.006272 0.035812
GO:0006378 mRNA polyadenylation 1.64% (1/61) 7.31 0.006272 0.035812
GO:0034654 nucleobase-containing compound biosynthetic process 4.92% (3/61) 2.97 0.006678 0.036936
GO:0140098 catalytic activity, acting on RNA 4.92% (3/61) 2.93 0.007139 0.037166
GO:0043170 macromolecule metabolic process 16.39% (10/61) 1.29 0.006961 0.037336
GO:0009987 cellular process 24.59% (15/61) 1.01 0.005677 0.038648
GO:0044238 primary metabolic process 19.67% (12/61) 1.11 0.008044 0.040681
GO:1901292 nucleoside phosphate catabolic process 1.64% (1/61) 6.73 0.009394 0.041567
GO:0005672 transcription factor TFIIA complex 1.64% (1/61) 6.73 0.009394 0.041567
GO:0043631 RNA polyadenylation 1.64% (1/61) 6.73 0.009394 0.041567
GO:0006465 signal peptide processing 1.64% (1/61) 6.73 0.009394 0.041567
GO:0005787 signal peptidase complex 1.64% (1/61) 6.73 0.009394 0.041567
GO:0006139 nucleobase-containing compound metabolic process 8.2% (5/61) 1.84 0.012844 0.042894
GO:0018130 heterocycle biosynthetic process 4.92% (3/61) 2.6 0.013473 0.043359
GO:0047429 nucleoside-triphosphate diphosphatase activity 1.64% (1/61) 6.31 0.012506 0.043402
GO:0031124 mRNA 3'-end processing 1.64% (1/61) 6.31 0.012506 0.043402
GO:0005680 anaphase-promoting complex 1.64% (1/61) 6.31 0.012506 0.043402
GO:0004045 aminoacyl-tRNA hydrolase activity 1.64% (1/61) 6.31 0.012506 0.043402
GO:0071826 ribonucleoprotein complex subunit organization 1.64% (1/61) 6.31 0.012506 0.043402
GO:0022618 ribonucleoprotein complex assembly 1.64% (1/61) 6.31 0.012506 0.043402
GO:0000152 nuclear ubiquitin ligase complex 1.64% (1/61) 6.31 0.012506 0.043402
GO:0005840 ribosome 4.92% (3/61) 2.62 0.0128 0.043569
GO:0071704 organic substance metabolic process 19.67% (12/61) 1.02 0.013327 0.043681
GO:1901566 organonitrogen compound biosynthetic process 6.56% (4/61) 2.23 0.010385 0.044833
GO:0016070 RNA metabolic process 6.56% (4/61) 2.22 0.01078 0.045431
GO:0008152 metabolic process 21.31% (13/61) 1.0 0.011154 0.045914
GO:0003729 mRNA binding 1.64% (1/61) 5.99 0.015608 0.047631
GO:0034404 nucleobase-containing small molecule biosynthetic process 1.64% (1/61) 5.99 0.015608 0.047631
GO:0031461 cullin-RING ubiquitin ligase complex 1.64% (1/61) 5.99 0.015608 0.047631
GO:0019438 aromatic compound biosynthetic process 4.92% (3/61) 2.64 0.012362 0.049729
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_64 0.033 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_190 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_201 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_12 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_78 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_136 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_196 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_242 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_7 0.034 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_83 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_88 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_25 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_179 0.036 Archaeplastida Compare
Gingko biloba HCCA Cluster_168 0.047 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_101 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_127 0.035 Archaeplastida Compare
Oryza sativa HCCA Cluster_277 0.036 Archaeplastida Compare
Oryza sativa HCCA Cluster_345 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_363 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_382 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_42 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_64 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_128 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_129 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_277 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_120 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_185 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_228 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_374 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_462 0.041 Archaeplastida Compare
Picea abies HCCA Cluster_596 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_17 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_9 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_55 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_127 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_230 0.043 Archaeplastida Compare
Vitis vinifera HCCA Cluster_79 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_154 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_177 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.039 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_325 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_338 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_64 0.033 LandPlants Compare
Amborella trichopoda HCCA Cluster_106 0.017 LandPlants Compare
Amborella trichopoda HCCA Cluster_169 0.017 LandPlants Compare
Amborella trichopoda HCCA Cluster_192 0.017 LandPlants Compare
Amborella trichopoda HCCA Cluster_201 0.018 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_78 0.031 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_103 0.016 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_112 0.018 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_128 0.014 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_136 0.034 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_196 0.023 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_242 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_39 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_168 0.047 LandPlants Compare
Gingko biloba HCCA Cluster_276 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_278 0.017 LandPlants Compare
Gingko biloba HCCA Cluster_279 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_101 0.019 LandPlants Compare
Oryza sativa HCCA Cluster_127 0.035 LandPlants Compare
Oryza sativa HCCA Cluster_277 0.036 LandPlants Compare
Oryza sativa HCCA Cluster_291 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_325 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_339 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_345 0.019 LandPlants Compare
Oryza sativa HCCA Cluster_353 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_363 0.025 LandPlants Compare
Oryza sativa HCCA Cluster_382 0.019 LandPlants Compare
Physcomitrella patens HCCA Cluster_42 0.02 LandPlants Compare
Physcomitrella patens HCCA Cluster_61 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_125 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_128 0.027 LandPlants Compare
Physcomitrella patens HCCA Cluster_129 0.033 LandPlants Compare
Physcomitrella patens HCCA Cluster_152 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_231 0.018 LandPlants Compare
Physcomitrella patens HCCA Cluster_248 0.036 LandPlants Compare
Physcomitrella patens HCCA Cluster_277 0.022 LandPlants Compare
Picea abies HCCA Cluster_120 0.018 LandPlants Compare
Picea abies HCCA Cluster_185 0.019 LandPlants Compare
Picea abies HCCA Cluster_228 0.016 LandPlants Compare
Picea abies HCCA Cluster_374 0.016 LandPlants Compare
Picea abies HCCA Cluster_412 0.016 LandPlants Compare
Picea abies HCCA Cluster_462 0.032 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_17 0.017 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_73 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_139 0.017 LandPlants Compare
Solanum lycopersicum HCCA Cluster_9 0.031 LandPlants Compare
Solanum lycopersicum HCCA Cluster_55 0.022 LandPlants Compare
Solanum lycopersicum HCCA Cluster_151 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_230 0.042 LandPlants Compare
Solanum lycopersicum HCCA Cluster_271 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_31 0.018 LandPlants Compare
Vitis vinifera HCCA Cluster_79 0.035 LandPlants Compare
Vitis vinifera HCCA Cluster_134 0.017 LandPlants Compare
Vitis vinifera HCCA Cluster_154 0.023 LandPlants Compare
Vitis vinifera HCCA Cluster_203 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_239 0.016 LandPlants Compare
Zea mays HCCA Cluster_72 0.016 LandPlants Compare
Zea mays HCCA Cluster_87 0.018 LandPlants Compare
Zea mays HCCA Cluster_177 0.021 LandPlants Compare
Zea mays HCCA Cluster_199 0.033 LandPlants Compare
Zea mays HCCA Cluster_267 0.019 LandPlants Compare
Zea mays HCCA Cluster_338 0.02 LandPlants Compare
Zea mays HCCA Cluster_345 0.018 LandPlants Compare
Sequences (61) (download table)

InterPro Domains

GO Terms

Family Terms