Coexpression cluster: Cluster_476 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005198 structural molecule activity 6.94% (5/72) 3.86 2.6e-05 0.001979
GO:0005622 intracellular 5.56% (4/72) 4.38 4.4e-05 0.002198
GO:0003735 structural constituent of ribosome 6.94% (5/72) 3.99 1.7e-05 0.002511
GO:0006518 peptide metabolic process 5.56% (4/72) 3.57 0.000373 0.005593
GO:0043603 cellular amide metabolic process 5.56% (4/72) 3.48 0.00048 0.005995
GO:1990904 ribonucleoprotein complex 5.56% (4/72) 3.51 0.00044 0.006004
GO:0043604 amide biosynthetic process 5.56% (4/72) 3.58 0.000369 0.006144
GO:0043228 non-membrane-bounded organelle 5.56% (4/72) 3.58 0.000364 0.006834
GO:0043043 peptide biosynthetic process 5.56% (4/72) 3.66 0.000295 0.007373
GO:0043232 intracellular non-membrane-bounded organelle 5.56% (4/72) 3.6 0.000352 0.007546
GO:0006412 translation 5.56% (4/72) 3.69 0.000277 0.008323
GO:0005840 ribosome 5.56% (4/72) 3.71 0.000261 0.009777
GO:0006433 prolyl-tRNA aminoacylation 1.39% (1/72) 9.95 0.001012 0.010841
GO:0004827 proline-tRNA ligase activity 1.39% (1/72) 9.95 0.001012 0.010841
GO:0043039 tRNA aminoacylation 2.78% (2/72) 4.56 0.003336 0.020848
GO:0043038 amino acid activation 2.78% (2/72) 4.56 0.003336 0.020848
GO:0009059 macromolecule biosynthetic process 5.56% (4/72) 2.69 0.003512 0.021073
GO:0004812 aminoacyl-tRNA ligase activity 2.78% (2/72) 4.59 0.003182 0.021695
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.78% (2/72) 4.59 0.003182 0.021695
GO:0034645 cellular macromolecule biosynthetic process 5.56% (4/72) 2.82 0.002558 0.022575
GO:0044424 intracellular part 8.33% (6/72) 2.11 0.00272 0.022669
GO:0006418 tRNA aminoacylation for protein translation 2.78% (2/72) 4.78 0.002465 0.023109
GO:0032991 protein-containing complex 6.94% (5/72) 2.34 0.003179 0.023841
GO:0034641 cellular nitrogen compound metabolic process 8.33% (6/72) 2.15 0.002386 0.02386
GO:0044444 cytoplasmic part 5.56% (4/72) 2.74 0.003121 0.024638
GO:0044464 cell part 8.33% (6/72) 1.96 0.004475 0.02582
GO:0043226 organelle 5.56% (4/72) 2.5 0.005577 0.027883
GO:0044271 cellular nitrogen compound biosynthetic process 5.56% (4/72) 2.48 0.005831 0.028214
GO:0008565 protein transporter activity 1.39% (1/72) 7.36 0.006056 0.028387
GO:0043229 intracellular organelle 5.56% (4/72) 2.51 0.005494 0.028415
GO:1901566 organonitrogen compound biosynthetic process 5.56% (4/72) 2.54 0.005143 0.028573
GO:0140101 catalytic activity, acting on a tRNA 2.78% (2/72) 4.21 0.005346 0.028638
GO:0006399 tRNA metabolic process 2.78% (2/72) 4.01 0.006999 0.031815
GO:0008079 translation termination factor activity 1.39% (1/72) 6.95 0.008066 0.03457
GO:0003747 translation release factor activity 1.39% (1/72) 6.95 0.008066 0.03457
GO:0019898 extrinsic component of membrane 1.39% (1/72) 6.78 0.00907 0.037793
GO:0008104 protein localization 2.78% (2/72) 3.58 0.012282 0.041871
GO:0033036 macromolecule localization 2.78% (2/72) 3.58 0.012282 0.041871
GO:0034660 ncRNA metabolic process 2.78% (2/72) 3.7 0.010506 0.042591
GO:0042886 amide transport 2.78% (2/72) 3.59 0.012141 0.043361
GO:0045184 establishment of protein localization 2.78% (2/72) 3.59 0.012141 0.043361
GO:0015833 peptide transport 2.78% (2/72) 3.59 0.012141 0.043361
GO:0015031 protein transport 2.78% (2/72) 3.59 0.012141 0.043361
GO:0006415 translational termination 1.39% (1/72) 6.04 0.015072 0.046139
GO:0022411 cellular component disassembly 1.39% (1/72) 6.04 0.015072 0.046139
GO:0009523 photosystem II 1.39% (1/72) 6.04 0.015072 0.046139
GO:0043624 cellular protein complex disassembly 1.39% (1/72) 6.04 0.015072 0.046139
GO:0032984 protein-containing complex disassembly 1.39% (1/72) 6.04 0.015072 0.046139
GO:0009654 photosystem II oxygen evolving complex 1.39% (1/72) 6.36 0.012076 0.047667
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_30 0.045 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_140 0.054 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_164 0.036 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_265 0.03 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_85 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_4 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_8 0.067 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_9 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_84 0.021 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_144 0.025 Gene family Compare
Oryza sativa HCCA cluster Cluster_7 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_18 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_21 0.026 Gene family Compare
Oryza sativa HCCA cluster Cluster_147 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_153 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_170 0.035 Gene family Compare
Oryza sativa HCCA cluster Cluster_226 0.029 Gene family Compare
Oryza sativa HCCA cluster Cluster_252 0.022 Gene family Compare
Oryza sativa HCCA cluster Cluster_299 0.025 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_94 0.026 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_149 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_149 0.049 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_184 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_214 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_234 0.022 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_291 0.033 Gene family Compare
Vitis vinifera HCCA cluster Cluster_55 0.036 Gene family Compare
Vitis vinifera HCCA cluster Cluster_95 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_120 0.045 Gene family Compare
Vitis vinifera HCCA cluster Cluster_180 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_203 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_211 0.033 Gene family Compare
Vitis vinifera HCCA cluster Cluster_212 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_69 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_75 0.032 Gene family Compare
Zea mays HCCA cluster Cluster_143 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_163 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_176 0.038 Gene family Compare
Zea mays HCCA cluster Cluster_246 0.045 Gene family Compare
Zea mays HCCA cluster Cluster_258 0.026 Gene family Compare
Zea mays HCCA cluster Cluster_267 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_313 0.018 Gene family Compare
Sequences (72) (download table)

InterPro Domains

GO Terms

Family Terms