Coexpression cluster: Cluster_350 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 16.39% (10/61) 2.33 2.6e-05 0.004282
GO:0031323 regulation of cellular metabolic process 6.56% (4/61) 2.38 0.007406 0.028919
GO:0071826 ribonucleoprotein complex subunit organization 1.64% (1/61) 7.08 0.007362 0.029448
GO:0120114 Sm-like protein family complex 1.64% (1/61) 7.08 0.007362 0.029448
GO:0022618 ribonucleoprotein complex assembly 1.64% (1/61) 7.08 0.007362 0.029448
GO:0030532 small nuclear ribonucleoprotein complex 1.64% (1/61) 7.08 0.007362 0.029448
GO:0097525 spliceosomal snRNP complex 1.64% (1/61) 7.08 0.007362 0.029448
GO:0031406 carboxylic acid binding 1.64% (1/61) 7.08 0.007362 0.029448
GO:0019222 regulation of metabolic process 6.56% (4/61) 2.33 0.00827 0.030824
GO:0060255 regulation of macromolecule metabolic process 6.56% (4/61) 2.33 0.008217 0.03134
GO:0003729 mRNA binding 1.64% (1/61) 6.82 0.008828 0.032173
GO:0009889 regulation of biosynthetic process 6.56% (4/61) 2.46 0.006032 0.034109
GO:0031326 regulation of cellular biosynthetic process 6.56% (4/61) 2.46 0.006032 0.034109
GO:2000112 regulation of cellular macromolecule biosynthetic process 6.56% (4/61) 2.46 0.006032 0.034109
GO:0010556 regulation of macromolecule biosynthetic process 6.56% (4/61) 2.46 0.006032 0.034109
GO:0051171 regulation of nitrogen compound metabolic process 6.56% (4/61) 2.38 0.007308 0.034245
GO:0080090 regulation of primary metabolic process 6.56% (4/61) 2.38 0.007308 0.034245
GO:0071840 cellular component organization or biogenesis 4.92% (3/61) 2.99 0.006427 0.035135
GO:0010468 regulation of gene expression 6.56% (4/61) 2.42 0.00665 0.035179
GO:0034660 ncRNA metabolic process 3.28% (2/61) 3.98 0.007239 0.035976
GO:0016573 histone acetylation 1.64% (1/61) 6.6 0.010292 0.036693
GO:0003723 RNA binding 4.92% (3/61) 2.93 0.007216 0.036982
GO:0017150 tRNA dihydrouridine synthase activity 1.64% (1/61) 7.4 0.005894 0.038664
GO:0006338 chromatin remodeling 1.64% (1/61) 7.4 0.005894 0.038664
GO:0006475 internal protein amino acid acetylation 1.64% (1/61) 6.4 0.011754 0.039338
GO:0018393 internal peptidyl-lysine acetylation 1.64% (1/61) 6.4 0.011754 0.039338
GO:0018394 peptidyl-lysine acetylation 1.64% (1/61) 6.4 0.011754 0.039338
GO:0019219 regulation of nucleobase-containing compound metabolic process 6.56% (4/61) 2.48 0.005862 0.0418
GO:0006473 protein acetylation 1.64% (1/61) 6.23 0.013213 0.042489
GO:0043543 protein acylation 1.64% (1/61) 6.23 0.013213 0.042489
GO:2001141 regulation of RNA biosynthetic process 6.56% (4/61) 2.48 0.00582 0.043389
GO:0051252 regulation of RNA metabolic process 6.56% (4/61) 2.48 0.00582 0.043389
GO:1903506 regulation of nucleic acid-templated transcription 6.56% (4/61) 2.48 0.00582 0.043389
GO:0006355 regulation of transcription, DNA-templated 6.56% (4/61) 2.48 0.00582 0.043389
GO:0005685 U1 snRNP 1.64% (1/61) 7.82 0.004424 0.045342
GO:0006376 mRNA splice site selection 1.64% (1/61) 7.82 0.004424 0.045342
GO:0033293 monocarboxylic acid binding 1.64% (1/61) 9.4 0.001477 0.048435
GO:0043486 histone exchange 1.64% (1/61) 9.4 0.001477 0.048435
GO:0008658 penicillin binding 1.64% (1/61) 9.4 0.001477 0.048435
GO:0008144 drug binding 1.64% (1/61) 9.4 0.001477 0.048435
GO:0006399 tRNA metabolic process 3.28% (2/61) 4.38 0.004202 0.049226
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_183 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_205 0.04 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_243 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_261 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_31 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_209 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_17 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_262 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_128 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_134 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_186 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_287 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_97 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_138 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_446 0.035 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_285 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_132 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_220 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_101 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_232 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_295 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_46 0.018 LandPlants Compare
Amborella trichopoda HCCA Cluster_183 0.018 LandPlants Compare
Amborella trichopoda HCCA Cluster_205 0.03 LandPlants Compare
Amborella trichopoda HCCA Cluster_230 0.016 LandPlants Compare
Amborella trichopoda HCCA Cluster_243 0.021 LandPlants Compare
Amborella trichopoda HCCA Cluster_261 0.02 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_31 0.02 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_155 0.014 LandPlants Compare
Gingko biloba HCCA Cluster_99 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_230 0.018 LandPlants Compare
Gingko biloba HCCA Cluster_262 0.016 LandPlants Compare
Marchantia polymorpha HCCA Cluster_45 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_90 0.015 LandPlants Compare
Marchantia polymorpha HCCA Cluster_128 0.027 LandPlants Compare
Oryza sativa HCCA Cluster_134 0.02 LandPlants Compare
Oryza sativa HCCA Cluster_166 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_186 0.022 LandPlants Compare
Oryza sativa HCCA Cluster_288 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_291 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_353 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_125 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_231 0.018 LandPlants Compare
Physcomitrella patens HCCA Cluster_287 0.019 LandPlants Compare
Physcomitrella patens HCCA Cluster_326 0.016 LandPlants Compare
Picea abies HCCA Cluster_97 0.015 LandPlants Compare
Picea abies HCCA Cluster_138 0.017 LandPlants Compare
Picea abies HCCA Cluster_446 0.026 LandPlants Compare
Picea abies HCCA Cluster_530 0.016 LandPlants Compare
Picea abies HCCA Cluster_535 0.018 LandPlants Compare
Solanum lycopersicum HCCA Cluster_146 0.017 LandPlants Compare
Solanum lycopersicum HCCA Cluster_158 0.017 LandPlants Compare
Solanum lycopersicum HCCA Cluster_161 0.018 LandPlants Compare
Solanum lycopersicum HCCA Cluster_267 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_277 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_285 0.019 LandPlants Compare
Vitis vinifera HCCA Cluster_108 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_220 0.021 LandPlants Compare
Zea mays HCCA Cluster_101 0.019 LandPlants Compare
Zea mays HCCA Cluster_140 0.017 LandPlants Compare
Zea mays HCCA Cluster_154 0.015 LandPlants Compare
Zea mays HCCA Cluster_232 0.02 LandPlants Compare
Zea mays HCCA Cluster_295 0.019 LandPlants Compare
Zea mays HCCA Cluster_320 0.017 LandPlants Compare
Amborella trichopoda HCCA Cluster_46 0.018 SeedPlants Compare
Amborella trichopoda HCCA Cluster_137 0.012 SeedPlants Compare
Amborella trichopoda HCCA Cluster_168 0.014 SeedPlants Compare
Amborella trichopoda HCCA Cluster_205 0.029 SeedPlants Compare
Amborella trichopoda HCCA Cluster_230 0.016 SeedPlants Compare
Amborella trichopoda HCCA Cluster_243 0.021 SeedPlants Compare
Amborella trichopoda HCCA Cluster_261 0.02 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_31 0.019 SeedPlants Compare
Gingko biloba HCCA Cluster_99 0.015 SeedPlants Compare
Gingko biloba HCCA Cluster_186 0.012 SeedPlants Compare
Gingko biloba HCCA Cluster_262 0.016 SeedPlants Compare
Oryza sativa HCCA Cluster_10 0.013 SeedPlants Compare
Oryza sativa HCCA Cluster_134 0.019 SeedPlants Compare
Oryza sativa HCCA Cluster_159 0.013 SeedPlants Compare
Oryza sativa HCCA Cluster_166 0.016 SeedPlants Compare
Oryza sativa HCCA Cluster_186 0.022 SeedPlants Compare
Oryza sativa HCCA Cluster_288 0.017 SeedPlants Compare
Oryza sativa HCCA Cluster_291 0.018 SeedPlants Compare
Oryza sativa HCCA Cluster_353 0.015 SeedPlants Compare
Picea abies HCCA Cluster_138 0.017 SeedPlants Compare
Picea abies HCCA Cluster_446 0.017 SeedPlants Compare
Picea abies HCCA Cluster_535 0.017 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_158 0.016 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_161 0.017 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_196 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_229 0.013 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_267 0.015 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_277 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_285 0.018 SeedPlants Compare
Vitis vinifera HCCA Cluster_81 0.012 SeedPlants Compare
Vitis vinifera HCCA Cluster_108 0.015 SeedPlants Compare
Vitis vinifera HCCA Cluster_152 0.012 SeedPlants Compare
Vitis vinifera HCCA Cluster_220 0.021 SeedPlants Compare
Zea mays HCCA Cluster_101 0.019 SeedPlants Compare
Zea mays HCCA Cluster_140 0.017 SeedPlants Compare
Zea mays HCCA Cluster_154 0.014 SeedPlants Compare
Zea mays HCCA Cluster_295 0.018 SeedPlants Compare
Zea mays HCCA Cluster_320 0.017 SeedPlants Compare
Sequences (61) (download table)

InterPro Domains

GO Terms

Family Terms