Coexpression cluster: Cluster_324 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043527 tRNA methyltransferase complex 1.68% (2/119) 7.85 2.5e-05 0.000936
GO:0034708 methyltransferase complex 1.68% (2/119) 7.85 2.5e-05 0.000936
GO:0030488 tRNA methylation 1.68% (2/119) 7.85 2.5e-05 0.000936
GO:0031515 tRNA (m1A) methyltransferase complex 1.68% (2/119) 7.85 2.5e-05 0.000936
GO:0016426 tRNA (adenine) methyltransferase activity 1.68% (2/119) 8.44 8e-06 0.000938
GO:0016429 tRNA (adenine-N1-)-methyltransferase activity 1.68% (2/119) 8.44 8e-06 0.000938
GO:0003909 DNA ligase activity 1.68% (2/119) 7.12 8.2e-05 0.002073
GO:0003910 DNA ligase (ATP) activity 1.68% (2/119) 7.12 8.2e-05 0.002073
GO:0016886 ligase activity, forming phosphoric ester bonds 1.68% (2/119) 7.12 8.2e-05 0.002073
GO:0001510 RNA methylation 1.68% (2/119) 6.85 0.000123 0.002793
GO:1902494 catalytic complex 3.36% (4/119) 3.95 0.000138 0.002864
GO:1990234 transferase complex 2.52% (3/119) 4.85 0.000155 0.00295
GO:0008175 tRNA methyltransferase activity 1.68% (2/119) 6.63 0.000171 0.003002
GO:0006310 DNA recombination 1.68% (2/119) 6.44 0.000228 0.00371
GO:0006400 tRNA modification 1.68% (2/119) 5.74 0.000629 0.009556
GO:0008173 RNA methyltransferase activity 1.68% (2/119) 5.35 0.001088 0.015503
GO:0008033 tRNA processing 1.68% (2/119) 4.85 0.002179 0.019107
GO:0019001 guanyl nucleotide binding 3.36% (4/119) 2.9 0.002112 0.01926
GO:0005525 GTP binding 3.36% (4/119) 2.92 0.002031 0.019291
GO:0032561 guanyl ribonucleotide binding 3.36% (4/119) 2.92 0.002031 0.019291
GO:0001883 purine nucleoside binding 3.36% (4/119) 2.92 0.002031 0.019291
GO:0001882 nucleoside binding 3.36% (4/119) 2.92 0.002031 0.019291
GO:0032550 purine ribonucleoside binding 3.36% (4/119) 2.92 0.002031 0.019291
GO:0032549 ribonucleoside binding 3.36% (4/119) 2.92 0.002031 0.019291
GO:0043414 macromolecule methylation 1.68% (2/119) 4.8 0.002364 0.019962
GO:0032991 protein-containing complex 5.04% (6/119) 2.27 0.001643 0.02081
GO:0016192 vesicle-mediated transport 2.52% (3/119) 3.72 0.001571 0.021076
GO:0045048 protein insertion into ER membrane 0.84% (1/119) 8.44 0.002881 0.021893
GO:0051205 protein insertion into membrane 0.84% (1/119) 8.44 0.002881 0.021893
GO:0071816 tail-anchored membrane protein insertion into ER membrane 0.84% (1/119) 8.44 0.002881 0.021893
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 1.68% (2/119) 4.58 0.003175 0.023353
GO:0009451 RNA modification 1.68% (2/119) 4.53 0.003396 0.024194
GO:0008104 protein localization 2.52% (3/119) 3.19 0.004442 0.028135
GO:0033036 macromolecule localization 2.52% (3/119) 3.19 0.004442 0.028135
GO:0032259 methylation 1.68% (2/119) 4.39 0.004098 0.028317
GO:0045184 establishment of protein localization 2.52% (3/119) 3.2 0.004334 0.029066
GO:0051641 cellular localization 2.52% (3/119) 3.13 0.005006 0.03085
GO:0000428 DNA-directed RNA polymerase complex 0.84% (1/119) 6.85 0.008618 0.040098
GO:0018298 protein-chromophore linkage 0.84% (1/119) 6.85 0.008618 0.040098
GO:0009584 detection of visible light 0.84% (1/119) 6.85 0.008618 0.040098
GO:0055029 nuclear DNA-directed RNA polymerase complex 0.84% (1/119) 6.85 0.008618 0.040098
GO:0009582 detection of abiotic stimulus 0.84% (1/119) 6.85 0.008618 0.040098
GO:0005666 RNA polymerase III complex 0.84% (1/119) 6.85 0.008618 0.040098
GO:0051606 detection of stimulus 0.84% (1/119) 6.85 0.008618 0.040098
GO:0009581 detection of external stimulus 0.84% (1/119) 6.85 0.008618 0.040098
GO:0009583 detection of light stimulus 0.84% (1/119) 6.85 0.008618 0.040098
GO:0003924 GTPase activity 2.52% (3/119) 2.96 0.006949 0.041693
GO:0034470 ncRNA processing 1.68% (2/119) 3.95 0.007514 0.043926
GO:0140097 catalytic activity, acting on DNA 1.68% (2/119) 3.85 0.008513 0.048525
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_11 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_204 0.032 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_228 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_231 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_243 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_46 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_114 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_1 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_140 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_159 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.029 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_168 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_189 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_336 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_356 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_370 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_207 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_276 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_319 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_371 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_375 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_527 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_88 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_135 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_33 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_39 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_73 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_76 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_89 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_118 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_122 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_223 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_232 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_28 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_38 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_131 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_214 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_219 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_231 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_147 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_213 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_255 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_263 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_283 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_293 0.031 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_190 0.014 LandPlants Compare
Amborella trichopoda HCCA Cluster_200 0.018 LandPlants Compare
Amborella trichopoda HCCA Cluster_204 0.02 LandPlants Compare
Amborella trichopoda HCCA Cluster_228 0.016 LandPlants Compare
Amborella trichopoda HCCA Cluster_231 0.02 LandPlants Compare
Amborella trichopoda HCCA Cluster_243 0.02 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_18 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_114 0.016 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_129 0.018 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_150 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_214 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_221 0.02 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_222 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_227 0.017 LandPlants Compare
Gingko biloba HCCA Cluster_116 0.015 LandPlants Compare
Gingko biloba HCCA Cluster_140 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_159 0.019 LandPlants Compare
Marchantia polymorpha HCCA Cluster_65 0.017 LandPlants Compare
Marchantia polymorpha HCCA Cluster_105 0.018 LandPlants Compare
Marchantia polymorpha HCCA Cluster_168 0.019 LandPlants Compare
Oryza sativa HCCA Cluster_60 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_175 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_189 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_307 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_336 0.018 LandPlants Compare
Physcomitrella patens HCCA Cluster_173 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_207 0.034 LandPlants Compare
Physcomitrella patens HCCA Cluster_261 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_274 0.015 LandPlants Compare
Picea abies HCCA Cluster_276 0.017 LandPlants Compare
Picea abies HCCA Cluster_413 0.015 LandPlants Compare
Picea abies HCCA Cluster_446 0.017 LandPlants Compare
Picea abies HCCA Cluster_527 0.018 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_88 0.02 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_91 0.017 LandPlants Compare
Solanum lycopersicum HCCA Cluster_33 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_73 0.02 LandPlants Compare
Solanum lycopersicum HCCA Cluster_76 0.023 LandPlants Compare
Solanum lycopersicum HCCA Cluster_89 0.019 LandPlants Compare
Solanum lycopersicum HCCA Cluster_122 0.019 LandPlants Compare
Solanum lycopersicum HCCA Cluster_142 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_228 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_266 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_271 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_2 0.017 LandPlants Compare
Vitis vinifera HCCA Cluster_28 0.019 LandPlants Compare
Vitis vinifera HCCA Cluster_43 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_214 0.025 LandPlants Compare
Vitis vinifera HCCA Cluster_237 0.016 LandPlants Compare
Zea mays HCCA Cluster_39 0.016 LandPlants Compare
Zea mays HCCA Cluster_92 0.017 LandPlants Compare
Zea mays HCCA Cluster_165 0.016 LandPlants Compare
Zea mays HCCA Cluster_213 0.019 LandPlants Compare
Zea mays HCCA Cluster_255 0.015 LandPlants Compare
Zea mays HCCA Cluster_263 0.023 LandPlants Compare
Zea mays HCCA Cluster_283 0.023 LandPlants Compare
Zea mays HCCA Cluster_293 0.025 LandPlants Compare
Zea mays HCCA Cluster_355 0.015 LandPlants Compare
Amborella trichopoda HCCA Cluster_157 0.012 SeedPlants Compare
Amborella trichopoda HCCA Cluster_200 0.018 SeedPlants Compare
Amborella trichopoda HCCA Cluster_204 0.02 SeedPlants Compare
Amborella trichopoda HCCA Cluster_228 0.016 SeedPlants Compare
Amborella trichopoda HCCA Cluster_231 0.016 SeedPlants Compare
Amborella trichopoda HCCA Cluster_243 0.02 SeedPlants Compare
Amborella trichopoda HCCA Cluster_255 0.012 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_103 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_114 0.016 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_129 0.012 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_150 0.015 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_181 0.014 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_214 0.017 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_221 0.02 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_229 0.012 SeedPlants Compare
Gingko biloba HCCA Cluster_1 0.012 SeedPlants Compare
Gingko biloba HCCA Cluster_159 0.019 SeedPlants Compare
Oryza sativa HCCA Cluster_85 0.013 SeedPlants Compare
Oryza sativa HCCA Cluster_175 0.016 SeedPlants Compare
Oryza sativa HCCA Cluster_189 0.014 SeedPlants Compare
Oryza sativa HCCA Cluster_301 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_336 0.018 SeedPlants Compare
Oryza sativa HCCA Cluster_341 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_350 0.013 SeedPlants Compare
Oryza sativa HCCA Cluster_356 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_370 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_380 0.012 SeedPlants Compare
Picea abies HCCA Cluster_184 0.012 SeedPlants Compare
Picea abies HCCA Cluster_276 0.017 SeedPlants Compare
Picea abies HCCA Cluster_375 0.012 SeedPlants Compare
Picea abies HCCA Cluster_408 0.014 SeedPlants Compare
Picea abies HCCA Cluster_478 0.012 SeedPlants Compare
Picea abies HCCA Cluster_527 0.018 SeedPlants Compare
Picea abies HCCA Cluster_541 0.012 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_33 0.012 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_73 0.02 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_76 0.023 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_89 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_122 0.016 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_142 0.016 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_179 0.012 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_223 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_271 0.016 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_276 0.012 SeedPlants Compare
Vitis vinifera HCCA Cluster_38 0.012 SeedPlants Compare
Vitis vinifera HCCA Cluster_43 0.015 SeedPlants Compare
Vitis vinifera HCCA Cluster_59 0.012 SeedPlants Compare
Vitis vinifera HCCA Cluster_107 0.012 SeedPlants Compare
Vitis vinifera HCCA Cluster_118 0.012 SeedPlants Compare
Vitis vinifera HCCA Cluster_214 0.025 SeedPlants Compare
Vitis vinifera HCCA Cluster_219 0.014 SeedPlants Compare
Vitis vinifera HCCA Cluster_233 0.012 SeedPlants Compare
Vitis vinifera HCCA Cluster_237 0.016 SeedPlants Compare
Zea mays HCCA Cluster_39 0.012 SeedPlants Compare
Zea mays HCCA Cluster_92 0.017 SeedPlants Compare
Zea mays HCCA Cluster_180 0.012 SeedPlants Compare
Zea mays HCCA Cluster_213 0.013 SeedPlants Compare
Zea mays HCCA Cluster_255 0.015 SeedPlants Compare
Zea mays HCCA Cluster_263 0.023 SeedPlants Compare
Zea mays HCCA Cluster_283 0.023 SeedPlants Compare
Zea mays HCCA Cluster_293 0.02 SeedPlants Compare
Zea mays HCCA Cluster_355 0.015 SeedPlants Compare
Sequences (119) (download table)

InterPro Domains

GO Terms

Family Terms