Coexpression cluster: Cluster_21 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044424 intracellular part 94.17% (113/120) 0.39 0.0 0.0
GO:0005739 mitochondrion 32.5% (39/120) 1.35 0.0 6e-06
GO:0043227 membrane-bounded organelle 84.17% (101/120) 0.45 0.0 1.1e-05
GO:0043231 intracellular membrane-bounded organelle 84.17% (101/120) 0.45 0.0 1.3e-05
GO:0044464 cell part 95.83% (115/120) 0.28 0.0 1.4e-05
GO:0043226 organelle 84.17% (101/120) 0.44 0.0 1.6e-05
GO:0043229 intracellular organelle 84.17% (101/120) 0.44 0.0 1.8e-05
GO:0006139 nucleobase-containing compound metabolic process 22.5% (27/120) 1.23 2.2e-05 0.002165
GO:0048188 Set1C/COMPASS complex 1.67% (2/120) 7.25 5.7e-05 0.003272
GO:0034708 methyltransferase complex 1.67% (2/120) 7.25 5.7e-05 0.003272
GO:0035097 histone methyltransferase complex 1.67% (2/120) 7.25 5.7e-05 0.003272
GO:1901293 nucleoside phosphate biosynthetic process 8.33% (10/120) 2.29 4.2e-05 0.003377
GO:0044428 nuclear part 9.17% (11/120) 2.12 4.8e-05 0.003535
GO:0044444 cytoplasmic part 53.33% (64/120) 0.57 6.7e-05 0.003582
GO:0009165 nucleotide biosynthetic process 8.33% (10/120) 2.29 4.1e-05 0.003685
GO:0090304 nucleic acid metabolic process 17.5% (21/120) 1.26 0.000154 0.007746
GO:0046483 heterocycle metabolic process 22.5% (27/120) 1.03 0.000235 0.011092
GO:0009560 embryo sac egg cell differentiation 4.17% (5/120) 3.05 0.000362 0.015325
GO:0140101 catalytic activity, acting on a tRNA 3.33% (4/120) 3.59 0.000353 0.015758
GO:0006753 nucleoside phosphate metabolic process 9.17% (11/120) 1.74 0.000485 0.018587
GO:0009117 nucleotide metabolic process 9.17% (11/120) 1.74 0.00047 0.018878
GO:0034641 cellular nitrogen compound metabolic process 22.5% (27/120) 0.94 0.000592 0.021625
GO:0072655 establishment of protein localization to mitochondrion 3.33% (4/120) 3.12 0.001192 0.02905
GO:0070585 protein localization to mitochondrion 3.33% (4/120) 3.12 0.001192 0.02905
GO:0043039 tRNA aminoacylation 2.5% (3/120) 3.86 0.001156 0.02999
GO:0006418 tRNA aminoacylation for protein translation 2.5% (3/120) 3.86 0.001156 0.02999
GO:0043038 amino acid activation 2.5% (3/120) 3.86 0.001156 0.02999
GO:0004812 aminoacyl-tRNA ligase activity 2.5% (3/120) 3.86 0.001156 0.02999
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.5% (3/120) 3.86 0.001156 0.02999
GO:0003006 developmental process involved in reproduction 15.0% (18/120) 1.14 0.001273 0.030096
GO:0006399 tRNA metabolic process 3.33% (4/120) 3.07 0.001369 0.031452
GO:0022412 cellular process involved in reproduction in multicellular organism 4.17% (5/120) 2.61 0.001424 0.031795
GO:0006626 protein targeting to mitochondrion 3.33% (4/120) 3.15 0.00111 0.034332
GO:0016070 RNA metabolic process 12.5% (15/120) 1.3 0.001091 0.035093
GO:0055086 nucleobase-containing small molecule metabolic process 9.17% (11/120) 1.6 0.001076 0.03605
GO:0000741 karyogamy 2.5% (3/120) 3.66 0.00173 0.036601
GO:0048284 organelle fusion 2.5% (3/120) 3.66 0.00173 0.036601
GO:0006725 cellular aromatic compound metabolic process 22.5% (27/120) 0.89 0.001054 0.036834
GO:0032259 methylation 6.67% (8/120) 1.83 0.001913 0.03845
GO:0043414 macromolecule methylation 6.67% (8/120) 1.83 0.001913 0.03845
GO:0003723 RNA binding 6.67% (8/120) 1.83 0.001984 0.038898
GO:0090407 organophosphate biosynthetic process 9.17% (11/120) 1.46 0.002242 0.040057
GO:1901360 organic cyclic compound metabolic process 22.5% (27/120) 0.82 0.002117 0.040518
GO:0005829 cytosol 12.5% (15/120) 1.2 0.00223 0.040753
GO:0044451 nucleoplasm part 3.33% (4/120) 2.88 0.002196 0.041054
GO:0034728 nucleosome organization 1.67% (2/120) 4.75 0.002481 0.042444
GO:0006334 nucleosome assembly 1.67% (2/120) 4.75 0.002481 0.042444
GO:0034654 nucleobase-containing compound biosynthetic process 8.33% (10/120) 1.52 0.002627 0.044005
GO:0006220 pyrimidine nucleotide metabolic process 3.33% (4/120) 2.77 0.002906 0.044939
GO:0006221 pyrimidine nucleotide biosynthetic process 3.33% (4/120) 2.77 0.002906 0.044939
GO:0009218 pyrimidine ribonucleotide metabolic process 3.33% (4/120) 2.78 0.002829 0.045493
GO:0009220 pyrimidine ribonucleotide biosynthetic process 3.33% (4/120) 2.78 0.002829 0.045493
GO:0065004 protein-DNA complex assembly 1.67% (2/120) 4.59 0.003102 0.046183
GO:0071824 protein-DNA complex subunit organization 1.67% (2/120) 4.59 0.003102 0.046183
GO:0048449 floral organ formation 3.33% (4/120) 2.7 0.003401 0.049716
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_35 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_59 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_90 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_260 0.026 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_10 0.022 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_37 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_64 0.018 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_69 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_124 0.02 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_152 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_7 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_26 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_45 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_52 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.022 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.056 Gene family Compare
Oryza sativa HCCA cluster Cluster_123 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_182 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_205 0.028 Gene family Compare
Oryza sativa HCCA cluster Cluster_228 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_276 0.042 Gene family Compare
Oryza sativa HCCA cluster Cluster_311 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_335 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_64 0.023 Gene family Compare
Picea abies HCCA cluster Cluster_201 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_248 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_453 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_66 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_95 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_197 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_14 0.059 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_99 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_121 0.044 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_166 0.034 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_176 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_217 0.031 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_229 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_231 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_240 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_243 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_254 0.04 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_268 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_270 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_301 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_302 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_312 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_1 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.027 Gene family Compare
Vitis vinifera HCCA cluster Cluster_58 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_70 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_72 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_82 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_85 0.034 Gene family Compare
Vitis vinifera HCCA cluster Cluster_104 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_126 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_128 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_149 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_182 0.029 Gene family Compare
Vitis vinifera HCCA cluster Cluster_186 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_231 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_15 0.025 Gene family Compare
Zea mays HCCA cluster Cluster_41 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_62 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_101 0.028 Gene family Compare
Zea mays HCCA cluster Cluster_120 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_172 0.042 Gene family Compare
Zea mays HCCA cluster Cluster_173 0.032 Gene family Compare
Zea mays HCCA cluster Cluster_209 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_221 0.033 Gene family Compare
Zea mays HCCA cluster Cluster_257 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_271 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_272 0.025 Gene family Compare
Zea mays HCCA cluster Cluster_275 0.025 Gene family Compare
Zea mays HCCA cluster Cluster_281 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_307 0.032 Gene family Compare
Zea mays HCCA cluster Cluster_328 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_333 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_341 0.05 Gene family Compare
Sequences (120) (download table)

InterPro Domains

GO Terms

Family Terms