Coexpression cluster: Cluster_375 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0140097 catalytic activity, acting on DNA 7.58% (5/66) 5.7 0.0 7e-06
GO:0008094 DNA-dependent ATPase activity 4.55% (3/66) 7.57 1e-06 3.4e-05
GO:0006259 DNA metabolic process 7.58% (5/66) 4.6 2e-06 9.7e-05
GO:0008026 ATP-dependent helicase activity 3.03% (2/66) 8.27 1.8e-05 0.00039
GO:0070035 purine NTP-dependent helicase activity 3.03% (2/66) 8.27 1.8e-05 0.00039
GO:0004003 ATP-dependent DNA helicase activity 3.03% (2/66) 8.49 1.3e-05 0.000418
GO:0016886 ligase activity, forming phosphoric ester bonds 3.03% (2/66) 7.9 3e-05 0.000445
GO:0003909 DNA ligase activity 3.03% (2/66) 7.9 3e-05 0.000445
GO:0003910 DNA ligase (ATP) activity 3.03% (2/66) 8.07 2.4e-05 0.000446
GO:0051716 cellular response to stimulus 4.55% (3/66) 4.73 0.000208 0.001715
GO:0006974 cellular response to DNA damage stimulus 4.55% (3/66) 4.73 0.000208 0.001715
GO:0033554 cellular response to stress 4.55% (3/66) 4.73 0.000208 0.001715
GO:0042623 ATPase activity, coupled 4.55% (3/66) 4.93 0.000137 0.001812
GO:0003678 DNA helicase activity 3.03% (2/66) 6.61 0.000193 0.001964
GO:0006310 DNA recombination 3.03% (2/66) 6.61 0.000193 0.001964
GO:0006281 DNA repair 4.55% (3/66) 4.84 0.000166 0.00199
GO:0090304 nucleic acid metabolic process 7.58% (5/66) 3.06 0.000346 0.002688
GO:0031262 Ndc80 complex 1.52% (1/66) 10.07 0.000928 0.005323
GO:0010038 response to metal ion 1.52% (1/66) 10.07 0.000928 0.005323
GO:0046938 phytochelatin biosynthetic process 1.52% (1/66) 10.07 0.000928 0.005323
GO:0046937 phytochelatin metabolic process 1.52% (1/66) 10.07 0.000928 0.005323
GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity 1.52% (1/66) 10.07 0.000928 0.005323
GO:0004386 helicase activity 3.03% (2/66) 5.65 0.000747 0.005474
GO:0006139 nucleobase-containing compound metabolic process 7.58% (5/66) 2.62 0.001351 0.00743
GO:0034641 cellular nitrogen compound metabolic process 9.09% (6/66) 2.27 0.001526 0.008056
GO:0044550 secondary metabolite biosynthetic process 1.52% (1/66) 9.07 0.001854 0.009065
GO:0000776 kinetochore 1.52% (1/66) 9.07 0.001854 0.009065
GO:0046483 heterocycle metabolic process 7.58% (5/66) 2.45 0.002279 0.010374
GO:0005524 ATP binding 10.61% (7/66) 1.94 0.002267 0.010687
GO:0006725 cellular aromatic compound metabolic process 7.58% (5/66) 2.4 0.002635 0.011596
GO:0050896 response to stimulus 6.06% (4/66) 2.76 0.00294 0.012519
GO:1901360 organic cyclic compound metabolic process 7.58% (5/66) 2.33 0.003218 0.013275
GO:0003677 DNA binding 7.58% (5/66) 2.3 0.003508 0.013619
GO:0008144 drug binding 10.61% (7/66) 1.84 0.003417 0.013666
GO:0019748 secondary metabolic process 1.52% (1/66) 8.07 0.003705 0.013973
GO:0016887 ATPase activity 4.55% (3/66) 3.22 0.004192 0.01537
GO:0035639 purine ribonucleoside triphosphate binding 10.61% (7/66) 1.75 0.004794 0.017101
GO:0030554 adenyl nucleotide binding 10.61% (7/66) 1.66 0.006657 0.02197
GO:0032559 adenyl ribonucleotide binding 10.61% (7/66) 1.66 0.00657 0.022236
GO:0016755 transferase activity, transferring amino-acyl groups 1.52% (1/66) 7.27 0.006475 0.022492
GO:0061505 DNA topoisomerase II activity 1.52% (1/66) 6.9 0.008317 0.02614
GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity 1.52% (1/66) 6.9 0.008317 0.02614
GO:0006950 response to stress 4.55% (3/66) 2.76 0.009967 0.030597
GO:0017076 purine nucleotide binding 10.61% (7/66) 1.49 0.012059 0.035374
GO:0032555 purine ribonucleotide binding 10.61% (7/66) 1.5 0.011855 0.035566
GO:0032553 ribonucleotide binding 10.61% (7/66) 1.48 0.012757 0.035828
GO:0003676 nucleic acid binding 9.09% (6/66) 1.64 0.01263 0.036243
GO:0097367 carbohydrate derivative binding 10.61% (7/66) 1.46 0.013311 0.036606
GO:0006270 DNA replication initiation 1.52% (1/66) 6.17 0.013824 0.03724
GO:0016874 ligase activity 3.03% (2/66) 3.47 0.014146 0.037346
GO:0010035 response to inorganic substance 1.52% (1/66) 5.99 0.015653 0.040514
GO:0003916 DNA topoisomerase activity 1.52% (1/66) 5.9 0.016566 0.041259
GO:0006265 DNA topological change 1.52% (1/66) 5.9 0.016566 0.041259
GO:0000166 nucleotide binding 10.61% (7/66) 1.34 0.020013 0.047174
GO:1901265 nucleoside phosphate binding 10.61% (7/66) 1.34 0.020013 0.047174
GO:0071103 DNA conformation change 1.52% (1/66) 5.68 0.019301 0.04718
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_126 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_136 0.027 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_187 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_199 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_249 0.019 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_49 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_7 0.027 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_79 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_95 0.025 Gene family Compare
Oryza sativa HCCA cluster Cluster_123 0.027 Gene family Compare
Oryza sativa HCCA cluster Cluster_134 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_224 0.025 Gene family Compare
Picea abies HCCA cluster Cluster_380 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_439 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_668 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_1024 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_6 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_76 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_120 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_152 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_31 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_45 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_47 0.029 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_152 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_232 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_244 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_302 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_89 0.023 Gene family Compare
Vitis vinifera HCCA cluster Cluster_92 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_114 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_138 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_158 0.027 Gene family Compare
Vitis vinifera HCCA cluster Cluster_175 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_195 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_215 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_224 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_37 0.032 Gene family Compare
Zea mays HCCA cluster Cluster_136 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.028 Gene family Compare
Zea mays HCCA cluster Cluster_188 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_207 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_272 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_341 0.023 Gene family Compare
Sequences (66) (download table)

InterPro Domains

GO Terms

Family Terms