Coexpression cluster: Cluster_164 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044424 intracellular part 18.31% (13/71) 3.24 0.0 0.0
GO:0044464 cell part 18.31% (13/71) 3.1 0.0 0.0
GO:0051603 proteolysis involved in cellular protein catabolic process 7.04% (5/71) 5.66 0.0 4e-06
GO:0032991 protein-containing complex 12.68% (9/71) 3.21 1e-06 2.9e-05
GO:0004298 threonine-type endopeptidase activity 4.23% (3/71) 6.6 4e-06 0.000103
GO:0070003 threonine-type peptidase activity 4.23% (3/71) 6.6 4e-06 0.000103
GO:0005839 proteasome core complex 4.23% (3/71) 6.6 4e-06 0.000103
GO:0004175 endopeptidase activity 7.04% (5/71) 4.54 3e-06 0.000104
GO:0019773 proteasome core complex, alpha-subunit complex 2.82% (2/71) 8.97 6e-06 0.000128
GO:0070011 peptidase activity, acting on L-amino acid peptides 8.45% (6/71) 3.68 8e-06 0.000157
GO:0008233 peptidase activity 8.45% (6/71) 3.61 1.1e-05 0.000189
GO:0006508 proteolysis 8.45% (6/71) 3.57 1.2e-05 0.000203
GO:0005575 cellular_component 18.31% (13/71) 1.88 4.3e-05 0.000643
GO:0003950 NAD+ ADP-ribosyltransferase activity 2.82% (2/71) 7.27 7.6e-05 0.001064
GO:0016763 transferase activity, transferring pentosyl groups 2.82% (2/71) 6.51 0.000224 0.002925
GO:0043170 macromolecule metabolic process 15.49% (11/71) 1.74 0.000405 0.004957
GO:0034708 methyltransferase complex 1.41% (1/71) 9.97 0.000998 0.008889
GO:0030488 tRNA methylation 1.41% (1/71) 9.97 0.000998 0.008889
GO:0043527 tRNA methyltransferase complex 1.41% (1/71) 9.97 0.000998 0.008889
GO:0016429 tRNA (adenine-N1-)-methyltransferase activity 1.41% (1/71) 9.97 0.000998 0.008889
GO:0031515 tRNA (m1A) methyltransferase complex 1.41% (1/71) 9.97 0.000998 0.008889
GO:0016426 tRNA (adenine) methyltransferase activity 1.41% (1/71) 9.97 0.000998 0.008889
GO:0006511 ubiquitin-dependent protein catabolic process 2.82% (2/71) 4.88 0.002143 0.016799
GO:0019941 modification-dependent protein catabolic process 2.82% (2/71) 4.88 0.002143 0.016799
GO:0043632 modification-dependent macromolecule catabolic process 2.82% (2/71) 4.88 0.002143 0.016799
GO:0008135 translation factor activity, RNA binding 2.82% (2/71) 4.84 0.002269 0.017103
GO:0008175 tRNA methyltransferase activity 1.41% (1/71) 8.38 0.00299 0.021708
GO:0044265 cellular macromolecule catabolic process 2.82% (2/71) 4.56 0.003322 0.023251
GO:0009987 cellular process 16.9% (12/71) 1.25 0.004034 0.024706
GO:0006807 nitrogen compound metabolic process 14.08% (10/71) 1.43 0.003697 0.024985
GO:0005759 mitochondrial matrix 1.41% (1/71) 7.97 0.003985 0.025197
GO:0044260 cellular macromolecule metabolic process 11.27% (8/71) 1.65 0.003967 0.025917
GO:0070013 intracellular organelle lumen 1.41% (1/71) 7.65 0.004979 0.027108
GO:0001510 RNA methylation 1.41% (1/71) 7.65 0.004979 0.027108
GO:0031974 membrane-enclosed lumen 1.41% (1/71) 7.65 0.004979 0.027108
GO:0043233 organelle lumen 1.41% (1/71) 7.65 0.004979 0.027108
GO:0030896 checkpoint clamp complex 1.41% (1/71) 7.38 0.005972 0.030803
GO:0004843 thiol-dependent ubiquitin-specific protease activity 1.41% (1/71) 7.38 0.005972 0.030803
GO:0033554 cellular response to stress 2.82% (2/71) 4.04 0.006706 0.032058
GO:0006974 cellular response to DNA damage stimulus 2.82% (2/71) 4.04 0.006706 0.032058
GO:0051716 cellular response to stimulus 2.82% (2/71) 4.04 0.006706 0.032058
GO:0000077 DNA damage checkpoint 1.41% (1/71) 6.97 0.007955 0.036259
GO:0031570 DNA integrity checkpoint 1.41% (1/71) 6.97 0.007955 0.036259
GO:0044427 chromosomal part 2.82% (2/71) 3.73 0.0101 0.041242
GO:0005694 chromosome 1.41% (1/71) 6.65 0.009934 0.041426
GO:0000075 cell cycle checkpoint 1.41% (1/71) 6.65 0.009934 0.041426
GO:0071704 organic substance metabolic process 15.49% (11/71) 1.14 0.010392 0.041566
GO:0044422 organelle part 4.23% (3/71) 2.79 0.009597 0.041801
GO:0044446 intracellular organelle part 4.23% (3/71) 2.8 0.00942 0.041961
GO:0019538 protein metabolic process 9.86% (7/71) 1.52 0.010877 0.042637
GO:0009057 macromolecule catabolic process 2.82% (2/71) 3.65 0.011279 0.043347
GO:0006414 translational elongation 1.41% (1/71) 6.38 0.011909 0.04404
GO:0003746 translation elongation factor activity 1.41% (1/71) 6.38 0.011909 0.04404
GO:0044454 nuclear chromosome part 1.41% (1/71) 6.27 0.012895 0.045953
GO:0006284 base-excision repair 1.41% (1/71) 6.27 0.012895 0.045953
GO:0006400 tRNA modification 1.41% (1/71) 6.16 0.01388 0.046905
GO:0045786 negative regulation of cell cycle 1.41% (1/71) 6.16 0.01388 0.046905
GO:0016779 nucleotidyltransferase activity 2.82% (2/71) 3.51 0.013517 0.047308
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_51 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_77 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_126 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.031 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_146 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_176 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.034 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_229 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_237 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_275 0.02 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_203 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_35 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_38 0.02 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_98 0.02 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_113 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_152 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_41 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_66 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_81 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_148 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_183 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_282 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_411 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_55 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_16 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_47 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_100 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_152 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_231 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_255 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_261 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_304 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_312 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_42 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_78 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_133 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_154 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_55 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_78 0.026 Gene family Compare
Zea mays HCCA cluster Cluster_106 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_129 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_153 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_162 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_193 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_221 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_243 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_259 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_271 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_333 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_342 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_345 0.019 Gene family Compare
Sequences (71) (download table)

InterPro Domains

GO Terms

Family Terms